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Bug 939006 - sci-chemistry/gromacs-2024.3 fails to compile: energyhistory.h:89:5: error: int64_t does not name a type
Summary: sci-chemistry/gromacs-2024.3 fails to compile: energyhistory.h:89:5: error: i...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Alexey Shvetsov
URL:
Whiteboard:
Keywords:
Depends on:
Blocks: gcc-15
  Show dependency tree
 
Reported: 2024-09-03 20:04 UTC by Agostino Sarubbo
Modified: 2024-11-21 08:13 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log.xz (build.log.xz,32.98 KB, application/x-xz)
2024-09-03 20:04 UTC, Agostino Sarubbo
Details

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Description Agostino Sarubbo gentoo-dev 2024-09-03 20:04:09 UTC
https://blogs.gentoo.org/ago/2020/07/04/gentoo-tinderbox/

Issue: sci-chemistry/gromacs-2024.2 fails to compile.
Discovered on: amd64 (internal ref: gcc15_tinderbox)
System: GCC-15-SYSTEM (https://wiki.gentoo.org/wiki/Project:Tinderbox/Common_Issues_Helper#GCC-15)

Info about the issue:
https://wiki.gentoo.org/wiki/Project:Tinderbox/Common_Issues_Helper#CF0014
Comment 1 Agostino Sarubbo gentoo-dev 2024-09-03 20:04:10 UTC
Created attachment 901996 [details]
build.log.xz

build log and emerge --info (compressed because it exceeds attachment limit, use 'xzless' to read it)
Comment 2 Agostino Sarubbo gentoo-dev 2024-09-03 20:04:12 UTC
Error(s) that match a know pattern in addition to what has been reported in the summary:


-- Could NOT find MPI (missing: MPI_CXX_FOUND CXX) 
-- Could NOT find MPI_CXX (missing: MPI_CXX_LIB_NAMES MPI_CXX_HEADER_DIR MPI_CXX_WORKS) 
-- Could NOT find Sphinx (missing: SPHINX_EXECUTABLE pygments) (Required is at least version "4.0.0")
FAILED: src/gromacs/CMakeFiles/libgromacs.dir/mdtypes/energyhistory.cpp.o 
/var/tmp/portage/sci-chemistry/gromacs-2024.2/work/gromacs-2024.2/src/gromacs/mdtypes/energyhistory.h:89:5: error: ‘int64_t’ does not name a type
Comment 3 Agostino Sarubbo gentoo-dev 2024-10-23 06:45:51 UTC
tinderbox_x86 has reproduced this issue with version 2024.3 - Updating summary.
Comment 4 Larry the Git Cow gentoo-dev 2024-11-21 08:13:48 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=534ae4eb830063aa768bca0cb6832159cec1d2d9

commit 534ae4eb830063aa768bca0cb6832159cec1d2d9
Author:     Alexey Shvetsov <alexxy@gentoo.org>
AuthorDate: 2024-11-21 08:13:09 +0000
Commit:     Alexey Shvetsov <alexxy@gentoo.org>
CommitDate: 2024-11-21 08:13:37 +0000

    sci-chemistry/gromacs: Fix build with gcc-15
    
    Closes: https://bugs.gentoo.org/937696
    Closes: https://bugs.gentoo.org/939006
    Signed-off-by: Alexey Shvetsov <alexxy@gentoo.org>

 sci-chemistry/gromacs/files/gromacs-gcc-15.patch | 36 ++++++++++++++++++++++++
 sci-chemistry/gromacs/gromacs-2024.3.ebuild      |  2 ++
 sci-chemistry/gromacs/gromacs-2024.4.ebuild      |  2 ++
 sci-chemistry/gromacs/gromacs-2025.0_beta.ebuild |  2 ++
 4 files changed, 42 insertions(+)