| 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 32 at (1) mpicxx -pipe -march=native -fno-diagnostics-color -O2 -DRELEASE_DATE="\"8/8/2012\"" -DVERSION="\"1.27.0\"" -DUSE_READLINE -DUSE_MPI -I. -DBIT_VERSION -c -o alignmentcell.o alignmentcell.cpp aligncommand.cpp: In member function ‘virtual int AlignCommand::execute()’: aligncommand.cpp:355:45: error: ‘MPI_MODE_CREATE’ was not declared in this scope; did you mean ‘MPI_MODE_NOPUT’? 355 | int outMode=MPI_MODE_CREATE|MPI_MODE_WRONLY; | ^~~~~~~~~~~~~~~ ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.1_desktop_gnome-j4-20211221-010010 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-9.3.1 [2] x86_64-pc-linux-gnu-11.2.1 * clang version 13.0.0 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/lib/llvm/13/bin /usr/lib/llvm/13 13.0.0 Python 3.9.9 Available Ruby profiles: [1] ruby26 (with Rubygems) [2] ruby27 (with Rubygems) [3] ruby30 (with Rubygems) * Available Rust versions: [1] rust-bin-1.57.0 [2] rust-1.57.0 * The following VMs are available for generation-2: 1) OpenJDK 8.312_p07 [openjdk-8] *) AdoptOpenJDK 8.312_p07 [openjdk-bin-8] Available Java Virtual Machines: [1] openjdk-8 [2] openjdk-bin-8 system-vm The Glorious Glasgow Haskell Compilation System, version 8.10.4 php cli: [1] php7.3 [2] php7.4 [3] php8.1 * HEAD of ::gentoo commit 4e3fc3ba96ec93688afc2308b7264752c55aed9e Author: Repository mirror & CI <repomirrorci@gentoo.org> Date: Sun Dec 26 21:21:48 2021 +0000 2021-12-26 21:21:46 UTC emerge -qpvO sci-biology/mothur [ebuild R ] sci-biology/mothur-1.27.0-r1 USE="mpi readline"
Created attachment 760440 [details] emerge-info.txt
Created attachment 760441 [details] emerge-history.txt
Created attachment 760442 [details] environment
*** This bug has been marked as a duplicate of bug 681640 ***
