too long lines were shrinked: x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"yass\" -DPACKAGE_TARNAME=\"yass\" -DPACKAGE_VERSION=\"1.14\" -DPACKAGE_STRING=\"yass\ 1.14\" -DPACKAGE_BUGREPORT=\"laurent.noe@lifl.fr\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRIN x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"yass\" -DPACKAGE_TARNAME=\"yass\" -DPACKAGE_VERSION=\"1.14\" -DPACKAGE_STRING=\"yass\ 1.14\" -DPACKAGE_BUGREPORT=\"laurent.noe@lifl.fr\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRIN x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"yass\" -DPACKAGE_TARNAME=\"yass\" -DPACKAGE_VERSION=\"1.14\" -DPACKAGE_STRING=\"yass\ 1.14\" -DPACKAGE_BUGREPORT=\"laurent.noe@lifl.fr\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRIN x86_64-pc-linux-gnu-gcc -DPACKAGE_NAME=\"yass\" -DPACKAGE_TARNAME=\"yass\" -DPACKAGE_VERSION=\"1.14\" -DPACKAGE_STRING=\"yass\ 1.14\" -DPACKAGE_BUGREPORT=\"laurent.noe@lifl.fr\" -DPACKAGE_URL=\"\" -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRIN x86_64-pc-linux-gnu-gcc -O3 -pipe -march=native -fno-diagnostics-color -Wl,-O1 -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,--defsym=__gentoo_check_ldflags__=0 -g -o yass align.o assemble.o avl.o display.o global_var.o hash.o kword.o list.o main.o prdyn.o proba.o red_black.o regroup.o threads.o /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: yass: hidden symbol `atexit' in /usr/lib64/libc_nonshared.a(atexit.oS) is referenced by DSO /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: final link failed: bad value collect2: error: ld returned 1 exit status make[1]: *** [Makefile:363: yass] Error 1 ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 23.0_desktop_gnome-20240327-033506 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-13 * clang/llvm (if any): clang version 18.1.2 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/lib/llvm/18/bin Configuration file: /etc/clang/x86_64-pc-linux-gnu-clang.cfg /usr/lib/llvm/18 18.1.2 Python 3.11.8 Available Ruby profiles: (none found) Available Rust versions: [1] rust-bin-1.76.0 * The following VMs are available for generation-2: 1) Eclipse Temurin JDK 17.0.10_p7 [openjdk-bin-17] *) Eclipse Temurin JDK 21.0.2_p13 [openjdk-bin-21] Available Java Virtual Machines: [1] openjdk-bin-17 [2] openjdk-bin-21 system-vm The Glorious Glasgow Haskell Compilation System, version 9.2.8 php cli (if any): go version go1.22.1 linux/amd64 HEAD of ::gentoo commit e4dfede730b53f63df826b8f18f9bba2ab713af4 Author: Repository mirror & CI <repomirrorci@gentoo.org> Date: Thu Mar 28 01:04:19 2024 +0000 2024-03-28 01:04:18 UTC emerge -qpvO sci-biology/yass [ebuild N ] sci-biology/yass-1.14-r3 USE="dmalloc -lowmem -threads"
Created attachment 888933 [details] emerge-info.txt
Created attachment 888934 [details] emerge-history.txt
Created attachment 888935 [details] environment
Created attachment 888936 [details] etc.clang.tar.xz
Created attachment 888937 [details] etc.portage.tar.xz
Created attachment 888938 [details] logs.tar.xz
Created attachment 888939 [details] qlist-info.txt
Created attachment 888940 [details] sci-biology:yass-1.14-r3:20240328-012000.log
Created attachment 888941 [details] temp.tar.xz
Doesn't use libtool at all.
bug is obsolete, closed in https://bugs.gentoo.org/946814 https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=d0977ceabf102fd8b7d570902a5feb516f71016c
