GCC 13 is much less forgiving! Trying to emerge sci-libs/caffe2 leads to various compilation errors: 1. /var/tmp/portage/sci-libs/caffe2-2.0.0-r1/work/pytorch-2.0.0/c10/util/Registry.h:89:22: error: ‘runtime_error’ is not a member of ‘std’ 89 | throw std::runtime_error(err_msg); Fixed by: adding a ‘#include <stdexcept>' in pytorch-2.0.0/c10/util/Registry.h 2. /var/tmp/portage/sci-libs/caffe2-2.0.0-r1/work/pytorch-2.0.0/torch/csrc/jit/passes/quantization/quantization_type.h:9:16: error: found ‘:’ in nested-name-specifier, expected ‘::’ 9 | enum QuantType : uint8_t { DYNAMIC = 0, STATIC Fixed by: adding a ‘#include <cstdint>' in pytorch-2.0.0/torch/csrc/jit/passes/quantization/quantization_type.h 3. /var/tmp/portage/sci-libs/caffe2-2.0.0-r1/work/pytorch-2.0.0/torch/csrc/jit/runtime/logging.cpp: In member function ‘virtual int64_t torch::jit::logging::LockingLogger::getCounterValue(const std::string&) const’: /var/tmp/portage/sci-libs/caffe2-2.0.0-r1/work/pytorch-2.0.0/torch/csrc/jit/runtime/logging.cpp:36:14: error: ‘runtime_error’ is not a member of ‘std’ 36 | throw std::runtime_error("Unknown aggregation type!"); Fixed by: adding a ‘#include <stdexcept>' in pytorch-2.0.0/torch/csrc/jit/runtime/logging.cpp 4. /var/tmp/portage/sci-libs/caffe2-2.0.0-r1/work/pytorch-2.0.0/torch/csrc/lazy/core/multi_wait.cpp: In member function ‘void torch::lazy::MultiWait::Wait(double)’: /var/tmp/portage/sci-libs/caffe2-2.0.0-r1/work/pytorch-2.0.0/torch/csrc/lazy/core/multi_wait.cpp:34:16: error: ‘runtime_error’ is not a member of ‘std’ 34 | throw std::runtime_error("Timeout"); Fixed by: adding a ‘#include <stdexcept>' in pytorch-2.0.0/torch/csrc/lazy/core/multi_wait.cpp Attached patch is all-in-one fix for those 4 issues.
Created attachment 859782 [details, diff] All-in-one fix for Gentoo bug #904086
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=6c34a781ed2d42b1923889fc4f6d015813d2fcdf commit 6c34a781ed2d42b1923889fc4f6d015813d2fcdf Author: Alfredo Tupone <tupone@gentoo.org> AuthorDate: 2023-04-12 17:56:54 +0000 Commit: Alfredo Tupone <tupone@gentoo.org> CommitDate: 2023-04-12 17:57:45 +0000 sci-libs/caffe2: to build with gcc-13 Closes: https://bugs.gentoo.org/904086 Signed-off-by: Alfredo Tupone <tupone@gentoo.org> sci-libs/caffe2/caffe2-2.0.0-r1.ebuild | 1 + sci-libs/caffe2/files/caffe2-2.0.0-gcc13.patch | 41 ++++++++++++++++++++++++++ 2 files changed, 42 insertions(+)
Even with this patch, I see linking error: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /var/tmp/portage/sci-libs/caffe2-2.0.0-r1/work/pytorch-2.0.0_build/lib/libtorch_cpu.so: undefined reference to `ska_ordered::detailv3::sherwood_v3_table<std::pair<c10::IValue, c10::IValue>, c10::IValue, c10::detail::DictKeyHash, ska_ordered::detailv3::KeyOrValueHasher<c10::IValue, std::pair<c10::IValue, c10::IValue>, c10::detail::DictKeyHash>, c10::detail::DictKeyEqualTo, ska_ordered::detailv3::KeyOrValueEquality<c10::IValue, std::pair<c10::IValue, c10::IValue>, c10::detail::DictKeyEqualTo>, std::allocator<std::pair<c10::IValue, c10::IValue> >, std::allocator<ska_ordered::detailv3::sherwood_v3_entry<std::pair<c10::IValue, c10::IValue> > > >::initSentinel()' This is specific for gcc-13. Portage 3.0.46 (python 3.10.11-final-0, default/linux/amd64/17.1/no-multilib, gcc-13, glibc-2.37-r2, 6.2.11-gentoo-dist x86_64) ================================================================= System uname: Linux-6.2.11-gentoo-dist-x86_64-AMD_Ryzen_9_7950X_16-Core_Processor-with-glibc2.37 KiB Mem: 65553872 total, 7929160 free KiB Swap: 268435452 total, 268435452 free Timestamp of repository gentoo: Sat, 15 Apr 2023 13:30:01 +0000 Head commit of repository gentoo: bd2a5326983f6a1de6df2d46f2f853a149577dd5 sh bash 5.2_p15-r2 ld GNU ld (Gentoo 2.40 p4) 2.40.0 app-misc/pax-utils: 1.3.7::gentoo app-shells/bash: 5.2_p15-r2::gentoo dev-java/java-config: 2.3.1::gentoo dev-lang/perl: 5.36.0-r2::gentoo dev-lang/python: 3.10.11::gentoo, 3.11.3::gentoo dev-lang/rust: 1.68.2::gentoo dev-util/cmake: 3.26.3::gentoo dev-util/meson: 1.0.1::gentoo sys-apps/baselayout: 2.13-r1::gentoo sys-apps/openrc: 0.46::gentoo sys-apps/sandbox: 2.30-r1::gentoo sys-devel/autoconf: 2.13-r8::gentoo, 2.71-r6::gentoo sys-devel/automake: 1.16.5-r1::gentoo sys-devel/binutils: 2.40-r4::gentoo sys-devel/binutils-config: 5.5::gentoo sys-devel/clang: 15.0.7-r1::gentoo, 16.0.1::gentoo sys-devel/gcc: 12.2.1_p20230304::gentoo, 13.0.1_pre20230409-r4::gentoo sys-devel/gcc-config: 2.10::gentoo sys-devel/libtool: 2.4.7-r1::gentoo sys-devel/lld: 15.0.7::gentoo, 16.0.1::gentoo sys-devel/llvm: 15.0.7::gentoo, 16.0.1::gentoo sys-devel/make: 4.4.1::gentoo sys-kernel/linux-headers: 6.2::gentoo (virtual/os-headers) sys-libs/glibc: 2.37-r2::gentoo Repositories: gentoo location: /var/db/repos/gentoo sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 volatile: False sync-rsync-extra-opts: sync-rsync-verify-max-age: 24 sync-rsync-verify-metamanifest: yes sync-rsync-verify-jobs: 16 ACCEPT_KEYWORDS="amd64 ~*" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=znver4 -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=znver4 -O2 -pipe" DISTDIR="/var/cache/distfiles" ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GDK_PIXBUF_MODULE_FILE GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg-live config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://ftp.vectranet.pl/gentoo/ http://mirror.leaseweb.com/gentoo/ http://mirror.eu.oneandone.net/linux/distributions/gentoo/gentoo/ http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror/ http://mirror.netcologne.de/gentoo/ http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ http://ftp.belnet.be/pub/rsync.gentoo.org/gentoo/ http://mirror.init7.net/gentoo/ http://tux.rainside.sk/gentoo/ http://gentoo.mirror.web4u.cz/" LANG="en_US" LC_ALL="en_US.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" LEX="flex" MAKEOPTS="-j30" PKGDIR="/var/cache/binpkgs" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" SHELL="/bin/bash" USE="X a52 aac acl alsa amd64 bzip2 cli connection-sharing context contrib contribdnn crypt cups dbus dcaenc dhcpcd dri dts emboss exif fam fbcon fdk ffmpeg fortran frei0r ftp gdbm geoclue geolocation gimp gps gui iconv icu iptables jpeg kde lame latex libass libglvnd libtirpc llvm lm-sensors lto mac minizip ncurses no-multilib nptl nvenc ogg opencl opengl openmp opus pam parallel-compiler pcre plasma pthread pulseaudio qml qt5 readline resolvconf sdl seccomp split-usr ssl syslog tbb test-rust text theora threads unicode v4l vaapi vector-icons vorbis vulkan x264 x265 xattr xml zlib" ABI_X86="64" ADA_TARGET="gnat_2021" AMDGPU_TARGETS="gfx1031" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="stage" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer nlpsolver" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-4 php8-0" POSTGRES_TARGETS="postgres12 postgres13" PYTHON_SINGLE_TARGET="python3_10" PYTHON_TARGETS="python3_10" RUBY_TARGETS="ruby32" USERLAND="GNU" VIDEO_CARDS="amdgpu fbdev amd radeon radeonsi vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq proto steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EMERGE_DEFAULT_OPTS, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LD, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS
Created attachment 860178 [details] complete build log
just a wild guess, it could be a different bug: https://bugs.gentoo.org/873055
Yeah, let's handle that in a new bug, especially given Adrien doesn't seem to have hit that issue.
(In reply to Sam James from comment #6) > Yeah, let's handle that in a new bug, especially given Adrien doesn't seem > to have hit that issue. Never encountered it with my main machine (AMD GPU). However I trapped another issue with caffe2/pytorch on an another Gentoo machine with a nVidia GPU+CUDA. Will be reported in another Gentoo bug :)
