... INFO: Found applicable config definition build:dynamic_kernels in file /var/tmp/portage/sci-libs/tensorflow-2.10.0/work/tensorflow-2.10.0-python3_10/.bazelrc: --define=dynamic_loaded_kernels=true --copt=-DAUTOLOAD_DYNAMIC_KERNELS INFO: Analyzed 2 targets (271 packages loaded, 24586 targets configured). INFO: Found 2 targets... [0 / 488] 2 actions, 0 running [Prepa] BazelWorkspaceStatusAction stable-status.txt [Prepa] Writing file tensorflow/libtensorflow_framework.so.2.10.0-2.params [Prepa] Executing genrule @com_google_protobuf//:protoc WARNING: An illegal reflective access operation has occurred WARNING: Illegal reflective access by com.google.devtools.build.lib.unsafe.StringUnsafe (file:/var/tmp/portage/sci-libs/tensorflow-2.10.0/homedir/.cache/bazelERROR: /var/tmp/portage/sci-libs/tensorflow-2.10.0/work/tensorflow-2.10.0-python3_10/tensorflow/core/kernels/BUILD:1031:18: Compiling tensorflow/core/kernels/debug_ops_gpu.cu.cc failed: (Exit 1): crosstool_wrapper_driver_is_not_gcc failed: error executing command (cd /var/tmp/portage/sci-libs/tensorflow-2.10.0/work/tensorflow-2.10.0-python3_10-bazel-base/execroot/org_tensorflow && \ exec env - \ CUDA_TOOLKIT_PATH=/opt/cuda \ GCC_HOST_COMPILER_PATH=/usr/x86_64-pc-linux-gnu/gcc-bin/11.3.0/x86_64-pc-linux-gnu-gcc \ HOME=/var/tmp/portage/sci-libs/tensorflow-2.10.0/homedir \ KERAS_HOME=/var/tmp/portage/sci-libs/tensorflow-2.10.0/temp/.keras \ PATH=/var/tmp/portage/sci-libs/tensorflow-2.10.0/temp/python3.10/bin:/usr/lib/portage/python3.10/ebuild-helpers/xattr:/usr/lib/portage/python3.10/ebuild-helpers:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin:/usr/lib/llvm/15/bin:/usr/lib/llvm/14/bin:/opt/cuda/bin \ PWD=/proc/self/cwd \ PYTHON_BIN_PATH=/usr/bin/python3.10 \ PYTHON_LIB_PATH=/usr/lib/python3.10/site-packages \ TF2_BEHAVIOR=1 \ TF_CUDA_COMPUTE_CAPABILITIES=8.6 \ TF_CUDA_PATHS=/opt/cuda \ TF_CUDA_VERSION=11.5 \ TF_CUDNN_VERSION=8.6 \ TF_SYSTEM_LIBS=absl_py,astor_archive,astunparse_archive,boringssl,com_github_googlecloudplatform_google_cloud_cpp,com_github_grpc_grpc,com_google_absl,com_google_protobuf,curl,cython,dill_archive,double_conversion,flatbuffers,functools32_archive,gast_archive,gif,hwloc,icu,jsoncpp_git,libjpeg_turbo,lmdb,nasm,nsync,opt_einsum_archive,org_sqlite,pasta,png,pybind11,six_archive,snappy,tblib_archive,termcolor_archive,typing_extensions_archive,wrapt,zlib \ external/local_config_cuda/crosstool/clang/bin/crosstool_wrapper_driver_is_not_gcc -MD -MF bazel-out/k8-opt/bin/tensorflow/core/kernels/_objs/debug_ops_gpu/debug_ops_gpu.cu.pic.d '-frandom-seed=bazel-out/k8-opt/bin/tensorflow/core/kernels/_objs/debug_ops_gpu/debug_ops_gpu.cu.pic.o' -DEIGEN_MPL2_ONLY '-DEIGEN_MAX_ALIGN_BYTES=64' -DTF_USE_SNAPPY -DGEMM_KERNEL_H '-DEIGEN_ALTIVEC_USE_CUSTOM_PACK=0' '-DLLVM_ON_UNIX=1' '-DHAVE_BACKTRACE=1' '-DBACKTRACE_HEADER=<execinfo.h>' '-DLTDL_SHLIB_EXT=".so"' '-DLLVM_PLUGIN_EXT=".so"' '-DLLVM_ENABLE_THREADS=1' '-DHAVE_DEREGISTER_FRAME=1' '-DHAVE_LIBPTHREAD=1' '-DHAVE_PTHREAD_GETNAME_NP=1' '-DHAVE_PTHREAD_H=1' '-DHAVE_PTHREAD_SETNAME_NP=1' '-DHAVE_REGISTER_FRAME=1' '-DHAVE_SETENV_R=1' '-DHAVE_STRERROR_R=1' '-DHAVE_SYSEXITS_H=1' '-DHAVE_UNISTD_H=1' -D_GNU_SOURCE '-DHAVE_LINK_H=1' '-DHAVE_LSEEK64=1' '-DHAVE_MALLINFO=1' '-DHAVE_SBRK=1' '-DHAVE_STRUCT_STAT_ST_MTIM_TV_NSEC=1' '-DLLVM_NATIVE_ARCH="X86"' '-DLLVM_NATIVE_ASMPARSER=LLVMInitializeX86AsmParser' '-DLLVM_NATIVE_ASMPRINTER=LLVMInitializeX86AsmPrinter' '-DLLVM_NATIVE_DISASSEMBLER=LLVMInitializeX86Disassembler' '-DLLVM_NATIVE_TARGET=LLVMInitializeX86Target' '-DLLVM_NATIVE_TARGETINFO=LLVMInitializeX86TargetInfo' '-DLLVM_NATIVE_TARGETMC=LLVMInitializeX86TargetMC' '-
# emerge --info '=sci-libs/tensorflow-2.10.0::gentoo' Portage 3.0.38.1 (python 3.10.8-final-0, default/linux/amd64/17.1/systemd, gcc-11.3.0, glibc-2.35-r8, 5.15.75-gentoo x86_64) ================================================================= System Settings ================================================================= System uname: Linux-5.15.75-gentoo-x86_64-Intel-R-_Pentium-R-_CPU_G4620_@_3.70GHz-with-glibc2.35 KiB Mem: 16313128 total, 8000968 free KiB Swap: 33287164 total, 33282556 free Timestamp of repository gentoo: Sun, 13 Nov 2022 21:30:01 +0000 Head commit of repository gentoo: 0156f5f3abb8245caed6ceee1e11df5d07102810 sh bash 5.1_p16-r2 ld GNU ld (Gentoo 2.38 p4) 2.38 distcc 3.4 x86_64-pc-linux-gnu [disabled] app-misc/pax-utils: 1.3.5::gentoo app-shells/bash: 5.1_p16-r2::gentoo dev-java/java-config: 2.3.1::gentoo dev-lang/perl: 5.34.1-r4::gentoo dev-lang/python: 3.8.15_p2::gentoo, 3.9.15_p2::gentoo, 3.10.8_p2::gentoo, 3.11.0_p1::gentoo dev-lang/rust: 1.64.0-r1::gentoo dev-util/cmake: 3.24.2::gentoo dev-util/meson: 0.63.2-r1::gentoo sys-apps/baselayout: 2.8::gentoo sys-apps/sandbox: 2.29::gentoo sys-apps/systemd: 251.4::gentoo sys-devel/autoconf: 2.71-r1::gentoo sys-devel/automake: 1.16.5::gentoo sys-devel/binutils: 2.38-r2::gentoo sys-devel/binutils-config: 5.4.1::gentoo sys-devel/clang: 15.0.3::gentoo sys-devel/gcc: 11.3.0::gentoo sys-devel/gcc-config: 2.8::gentoo sys-devel/libtool: 2.4.7::gentoo sys-devel/llvm: 14.0.6-r2::gentoo, 15.0.3::gentoo sys-devel/make: 4.3::gentoo sys-kernel/linux-headers: 5.15-r3::gentoo (virtual/os-headers) sys-libs/glibc: 2.35-r8::gentoo Repositories: gentoo location: /var/db/repos/gentoo sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 sync-rsync-extra-opts: sync-rsync-verify-metamanifest: yes sync-rsync-verify-max-age: 24 sync-rsync-verify-jobs: 1 ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="* -@EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-march=native -O2 -pipe" DISTDIR="/var/cache/distfiles" ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME" FCFLAGS="-march=native -O2 -pipe" FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg-live config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-march=native -O2 -pipe" GENTOO_MIRRORS="https://gentoo.osuosl.org/ https://mirrors.rit.edu/gentoo/" LANG="en_US.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" PKGDIR="/var/cache/binpkgs" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" SHELL="/bin/bash" USE="acl amd64 bzip2 cli crypt cuda dri elf fortran gdbm iconv icu ipv6 json libglvnd libtirpc mbox mmx mongodb multilib ncat ncurses ndiff nls nping nptl nse nvidia openmp pam pcre python readline sasl seccomp sendmail smtp split-usr spoof-source sse sse2 ssl systemd test-rust tools udev unicode user-session uvm xattr xla xvmc zenmap zlib" ABI_X86="64" ADA_TARGET="gnat_2020" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-4 php8-0" POSTGRES_TARGETS="postgres12 postgres13" PYTHON_SINGLE_TARGET="python3_10" PYTHON_TARGETS="python3_10 python3_9" RUBY_TARGETS="ruby27" USERLAND="GNU" VIDEO_CARDS="fbdev intel nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq proto steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EMERGE_DEFAULT_OPTS, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LC_ALL, LD, LEX, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, MAKEOPTS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS
# emerge -pqv '=sci-libs/tensorflow-2.10.0::gentoo' [ebuild N ] sci-libs/tensorflow-2.10.0 USE="cuda python xla -mpi" CPU_FLAGS_X86="sse sse2 -avx -avx2 -fma3 -fma4 -sse3 -sse4_1 -sse4_2" PYTHON_TARGETS="python3_9 python3_10 -python3_8" [ebuild N ] sci-libs/keras-2.10.0 PYTHON_TARGETS="python3_9 python3_10 -python3_8" [ebuild N ] sci-libs/tensorflow-estimator-2.10 PYTHON_TARGETS="python3_9 python3_10 -python3_8"
Created attachment 832877 [details] build.log
This to me looks a whole lot like former tensorflow-2.5.0 bug that was already patched. Did the patch not carry forward to tensorflow.2.10.0 ??? https://bugs.gentoo.org/800824 I have tried older version of Protobuf but no luck. Help is appreciated.
Hello, would just like to add that I also have had this issue, both on sci-libs/tensorflow-2.10.0 and sci-libs/tensorflow-2.11.0.
The bug has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=d2ed3a1af052c5886b94a37efee34574114cabbf commit d2ed3a1af052c5886b94a37efee34574114cabbf Author: wangjiezhe <wangjiezhe@gmail.com> AuthorDate: 2024-01-20 05:39:25 +0000 Commit: Jason Zaman <perfinion@gentoo.org> CommitDate: 2024-02-03 19:32:42 +0000 sci-libs/tensorflow: update dependencies tensorflow 2.11 and 2.12 need abseil-cpp>=20220623 built with C++17 tensorflow-2.12 cannot compile with abseil-cpp-20230125.2 stick to version 20220623 Bug: https://bugs.gentoo.org/881445 Bug: https://bugs.gentoo.org/882617 Bug: https://bugs.gentoo.org/913731 Bug: https://bugs.gentoo.org/915621 Signed-off-by: wangjiezhe <wangjiezhe@gmail.com> Signed-off-by: Jason Zaman <perfinion@gentoo.org> sci-libs/tensorflow/tensorflow-2.11.0.ebuild | 3 ++- sci-libs/tensorflow/tensorflow-2.12.0.ebuild | 4 ++-- 2 files changed, 4 insertions(+), 3 deletions(-)
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=f57039ebc84c40eddf9f6a63afbbf86a8b3c42da commit f57039ebc84c40eddf9f6a63afbbf86a8b3c42da Author: Jakov Smolić <jsmolic@gentoo.org> AuthorDate: 2024-02-24 12:47:06 +0000 Commit: Jakov Smolić <jsmolic@gentoo.org> CommitDate: 2024-02-24 12:47:06 +0000 sci-libs/tensorflow: treeclean Bug: https://bugs.gentoo.org/807625 Closes: https://bugs.gentoo.org/906609 Closes: https://bugs.gentoo.org/905673 Closes: https://bugs.gentoo.org/913731 Closes: https://bugs.gentoo.org/882617 Closes: https://bugs.gentoo.org/881445 Closes: https://bugs.gentoo.org/915621 Closes: https://bugs.gentoo.org/909002 Closes: https://bugs.gentoo.org/705712 Closes: https://bugs.gentoo.org/873295 Closes: https://bugs.gentoo.org/907031 Closes: https://bugs.gentoo.org/909003 Closes: https://bugs.gentoo.org/909767 Closes: https://bugs.gentoo.org/913534 Closes: https://bugs.gentoo.org/818766 Closes: https://bugs.gentoo.org/830167 Closes: https://bugs.gentoo.org/854354 Closes: https://bugs.gentoo.org/851573 Closes: https://bugs.gentoo.org/780468 Closes: https://bugs.gentoo.org/910029 Closes: https://bugs.gentoo.org/897228 Closes: https://bugs.gentoo.org/844196 Closes: https://bugs.gentoo.org/910030 Closes: https://bugs.gentoo.org/897230 Closes: https://bugs.gentoo.org/788064 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org> profiles/package.mask | 1 - sci-libs/tensorflow/Manifest | 57 -- ...dd-rules-docker-http_archive-bazel-toolch.patch | 37 - ...emlib-Latest-absl-LTS-has-split-cord-libs.patch | 32 - ...Must-link-against-libm-for-round-and-log2.patch | 29 - ...ensorflow_cc-Add-systemlib-nsync-linkopts.patch | 35 - ...systemlib-Updates-for-Abseil-20220623-LTS.patch | 71 -- ...0006-systemlib-Update-targets-for-absl_py.patch | 24 - ...temlib-Add-well_known_types_py_pb2-target.patch | 28 - ...-0008-Relax-setup.py-version-requirements.patch | 86 -- ....0-0009-systemlib-update-targets-for-absl.patch | 365 -------- ...010-systemlib-fix-missing-osx-in-pybind11.patch | 25 - ...temlib-fix-missing-LICENSE-in-flatbuffers.patch | 25 - ...nstallation-remove-cp_local_config_python.patch | 68 -- ...2.15.0-0013-build-use-non-hermetic-python.patch | 990 --------------------- sci-libs/tensorflow/metadata.xml | 15 - sci-libs/tensorflow/tensorflow-2.15.0.ebuild | 464 ---------- 17 files changed, 2352 deletions(-)
