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Bug 835157 - dev-lang/ocaml-4.13.1 fails to compile dev-ml/findlib if compiled with "-flto"
Summary: dev-lang/ocaml-4.13.1 fails to compile dev-ml/findlib if compiled with "-flto"
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Gentoo Team for the ML programming language family
URL: https://github.com/ocaml/ocaml/issues...
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2022-03-14 20:13 UTC by Matteo Salonia
Modified: 2022-09-29 07:03 UTC (History)
3 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
findlib build log (ocaml built with "-flto") (findlib.tar.gz,50.01 KB, application/tar)
2022-03-14 20:33 UTC, Matteo Salonia
Details

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Description Matteo Salonia 2022-03-14 20:13:44 UTC
Hello everyone,
I just discovered a bug. If "ocaml" is compiled with the flag "-fno-semantic-interposition", it will compile most programs just fine, but it will error out when compiling "dev-ml/findlib".

When compiling findlib, after a certain point ld will start spitting out errors saying "undefined reference to xxxxx.o", and will fail to compile findlib.

I think the best option is to filter out "-fno-semantic-interposition" from CFLAGS in ocaml's ebuild (via flag-o-matic?)

Greetings,
Matteo
Comment 1 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2022-03-14 20:20:38 UTC
It'd be most helpful to see an example, but that doesn't sound crazy.
Comment 2 Matteo Salonia 2022-03-14 20:29:12 UTC
It appears "-fno-semantic-interposition" is not a problem -- LTO seems to be the problem here. ("-flto")
Comment 3 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2022-03-14 20:31:31 UTC
(In reply to Matteo Salonia from comment #2)
> It appears "-fno-semantic-interposition" is not a problem -- LTO seems to be
> the problem here. ("-flto")

That's why the full logs are useful :)

Please attach some showing failure, and include emerge --info.

I thought we'd already handled this before and that 4.13.x should be unaffected (fixed already upstream): bug 818445.
Comment 4 Matteo Salonia 2022-03-14 20:33:03 UTC
Created attachment 767073 [details]
findlib build log (ocaml built with "-flto")

Added findlib build log
Comment 5 Matteo Salonia 2022-03-14 20:34:57 UTC
emerge --info:

Portage 3.0.30 (python 3.9.10-final-0, default/linux/amd64/17.1/desktop, gcc-11.2.1, glibc-2.34-r9, 5.16.0-pf4 x86_64)
=================================================================
System uname: Linux-5.16.0-pf4-x86_64-Intel-R-_Core-TM-_i7-4700MQ_CPU_@_2.40GHz-with-glibc2.34
KiB Mem:     8028448 total,   2825916 free
KiB Swap:   24894780 total,  24343100 free
Timestamp of repository gentoo: Sun, 13 Mar 2022 09:45:01 +0000
Head commit of repository gentoo: b94e51fbcf381f2ff91059d04429023cf7473e26
Timestamp of repository mv: Sat, 12 Mar 2022 19:49:37 +0000
Head commit of repository mv: 7dcac07cce31aceaf566d3ff2f8dd71edbac9f5e

sh bash 5.1_p16
ld GNU ld (Gentoo 2.37_p1 p2) 2.37
distcc 3.4 x86_64-pc-linux-gnu [disabled]
ccache version 4.5.1 [enabled]
app-misc/pax-utils:        1.3.3::gentoo
app-shells/bash:           5.1_p16::gentoo
dev-java/java-config:      2.3.1::gentoo
dev-lang/perl:             5.34.0-r8::gentoo
dev-lang/python:           3.9.10_p1::gentoo, 3.10.2_p1::gentoo, 3.11.0_alpha5_p1::gentoo
dev-lang/rust-bin:         1.59.0::gentoo
dev-util/ccache:           4.5.1::gentoo
dev-util/cmake:            3.22.2::gentoo
dev-util/meson:            0.61.1::gentoo
sys-apps/baselayout:       2.8::gentoo
sys-apps/openrc:           0.44.10::gentoo
sys-apps/sandbox:          2.29::gentoo
sys-devel/autoconf:        2.13-r1::gentoo, 2.71-r1::gentoo
sys-devel/automake:        1.16.5::gentoo
sys-devel/binutils:        2.37_p1-r2::gentoo
sys-devel/binutils-config: 5.4.1::gentoo
sys-devel/clang:           13.0.0::gentoo
sys-devel/gcc:             11.2.1_p20220115::gentoo
sys-devel/gcc-config:      2.5-r1::gentoo
sys-devel/libtool:         2.4.6-r6::gentoo
sys-devel/llvm:            13.0.0::gentoo
sys-devel/make:            4.3::gentoo
sys-kernel/linux-headers:  5.16::gentoo (virtual/os-headers)
sys-libs/glibc:            2.34-r9::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: rsync
    sync-uri: rsync://rsync8.de.gentoo.org/gentoo-portage
    priority: -1000
    sync-rsync-verify-metamanifest: yes
    sync-rsync-verify-max-age: 24
    sync-rsync-verify-jobs: 1
    sync-rsync-extra-opts: 

[...]

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="@GPL-COMPATIBLE @FREE"
CBUILD="x86_64-pc-linux-gnu"
CC="gcc"
CFLAGS="-O3 -pipe -march=haswell -mtune=haswell -fno-plt -falign-functions=32 -flto=4 -fgraphite-identity -floop-nest-optimize -fipa-pta -fno-semantic-interposition -fno-common -fno-signed-zeros -fno-trapping-math -fassociative-math -freciprocal-math -fno-math-errno -ffinite-math-only -fno-rounding-math -fno-signaling-nans -fcx-limited-range -fexcess-precision=fast -fdevirtualize-at-ltrans -fno-plt"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O3 -pipe -march=haswell -mtune=haswell -fno-plt -falign-functions=32"
DISTDIR="/var/cache/distfiles"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg buildpkg-live ccache cgroup collision-protect config-protect-if-modified distlocks downgrade-backup ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch parallel-install pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms sign strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--fuse-ld=ld.gold"
MAKEOPTS="-j4 -l4"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
SHELL="/bin/bash"
USE="X aac aalib acpi alsa amd64 bash-completion bindist bzip2 cairo cdda cdr cli crypt dbus dri dts dvd dvdr elogind emoji encode flac gdbm gif git gpm graphite gtk gui harfbuzz hwloc iconv icu initramfs jit jpeg lcms libglvnd libnotify libtirpc logrotate lto lz4 lzma mad man mp3 mp4 mpeg mtp multilib ncurses nptl ogg opengl openmp pam pango pcre pdf persist pgo png ppds readline sdl seccomp sna spell split-usr ssl startup-notification svg tiff tools truetype tui udisks unicode upower usb uxa v4l vaapi vorbis webp wifi wxwidgets x264 xattr xcb xft xinerama xml xv xvid zlib" ABI_X86="64" ADA_TARGET="gnat_2020" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 f16c fma3 mmx mmxext pclmul popcnt rdrand sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64" INPUT_DEVICES="libinput synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-4 php8-0" POSTGRES_TARGETS="postgres12 postgres13" PYTHON_SINGLE_TARGET="python3_9" PYTHON_TARGETS="python3_9" RUBY_TARGETS="ruby26 ruby27" USERLAND="GNU" VIDEO_CARDS="intel i965" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq proto steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EMERGE_DEFAULT_OPTS, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LC_ALL, LD, LEX, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS
Comment 6 Matteo Salonia 2022-03-14 20:36:30 UTC
Note: I have special overrides for ocaml:

/etc/portage/env/perf-no-lto.conf
COMMON_FLAGS="-Ofast -pipe -march=haswell -mtune=haswell -fno-plt -falign-functions=32 -floop-nest-optimize -fipa-pta -fno-semantic-interposition -fno-common -fno-signed-zeros -fno-trapping-math -fassociative-math -freciprocal-math -fno-math-errno -ffinite-math-only -fno-rounding-math -fno-signaling-nans -fcx-limited-range -fexcess-precision=fast -fdevirtualize-at-ltrans"
CFLAGS="${COMMON_FLAGS}"
CXXFLAGS="${COMMON_FLAGS}"

/etc/portage/package.env/dev-lang
dev-lang/ocaml perf-no-lto.conf
Comment 7 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2022-03-14 20:38:01 UTC
(In reply to Matteo Salonia from comment #6)
> Note: I have special overrides for ocaml:
> 
> /etc/portage/env/perf-no-lto.conf
> COMMON_FLAGS="-Ofast -pipe -march=haswell -mtune=haswell -fno-plt
> -falign-functions=32 -floop-nest-optimize -fipa-pta
> -fno-semantic-interposition -fno-common -fno-signed-zeros -fno-trapping-math
> -fassociative-math -freciprocal-math -fno-math-errno -ffinite-math-only
> -fno-rounding-math -fno-signaling-nans -fcx-limited-range
> -fexcess-precision=fast -fdevirtualize-at-ltrans"
> CFLAGS="${COMMON_FLAGS}"
> CXXFLAGS="${COMMON_FLAGS}"
> 
> /etc/portage/package.env/dev-lang
> dev-lang/ocaml perf-no-lto.conf

I'm confused then. Is it broken with these options or something else? I thought it was LTO?

Also, is this definitely with OCaml 4.13.1?
Comment 8 Matteo Salonia 2022-03-14 20:41:22 UTC
> I'm confused then. Is it broken with these options or something else? I
> thought it was LTO?

No, it works with these options, it's broken if you add "-flto".

> Also, is this definitely with OCaml 4.13.1?

Yes.
Comment 9 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2022-03-14 20:49:24 UTC
(In reply to Matteo Salonia from comment #8)
> > I'm confused then. Is it broken with these options or something else? I
> > thought it was LTO?
> 
> No, it works with these options, it's broken if you add "-flto".
> 
> > Also, is this definitely with OCaml 4.13.1?
> 
> Yes.

Does it fail with just -O2 -flto? You need to narrow down which flags and report it upstream so it can be fixed properly.

Otherwise, all we can do for now is filter LTO again. It's a shame that the fix in https://github.com/ocaml/ocaml/issues/9825 was insufficient.
Comment 10 Matteo Salonia 2022-03-14 20:50:30 UTC
Yes, it does fail with just "-O2 -flto". Removing "-flto" seems to fix all issues for me.
Comment 11 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2022-03-14 20:54:31 UTC
(In reply to Matteo Salonia from comment #10)
> Yes, it does fail with just "-O2 -flto". Removing "-flto" seems to fix all
> issues for me.

What a shame, thanks for all the info! OK, we'll filter -flto then, but can you report this upstream please?
Comment 12 Matteo Salonia 2022-03-14 21:05:15 UTC
(In reply to Sam James from comment #11)
> Can you report this upstream please?

Sure, I will report this tomorrow when I have the time.
Comment 13 Matteo Salonia 2022-03-16 14:17:45 UTC
Issue reported upstream.
URL: https://github.com/ocaml/ocaml/issues/11119
Comment 14 Larry the Git Cow gentoo-dev 2022-09-29 07:03:42 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=f4c0389745bf470502ddefc8065d50e6a9033260

commit f4c0389745bf470502ddefc8065d50e6a9033260
Author:     Alfredo Tupone <tupone@gentoo.org>
AuthorDate: 2022-09-29 07:00:02 +0000
Commit:     Alfredo Tupone <tupone@gentoo.org>
CommitDate: 2022-09-29 07:00:02 +0000

    dev-lang/ocaml: filtering lto
    
    Closes: https://bugs.gentoo.org/872995
    Closes: https://bugs.gentoo.org/870349
    Closes: https://bugs.gentoo.org/835157
    Closes: https://bugs.gentoo.org/858446
    
    Signed-off-by: Alfredo Tupone <tupone@gentoo.org>

 dev-lang/ocaml/{ocaml-4.14.0.ebuild => ocaml-4.14.0-r1.ebuild} | 1 +
 1 file changed, 1 insertion(+)