Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 757867 - sci-biology/biopython: has optfeature on dev-python/mysql-python
Summary: sci-biology/biopython: has optfeature on dev-python/mysql-python
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Science Biology related packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2020-12-01 12:05 UTC by Joonas Niilola
Modified: 2021-12-30 18:12 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments

Note You need to log in before you can comment on or make changes to this bug.
Description Joonas Niilola gentoo-dev 2020-12-01 12:05:09 UTC
Hi, 

sci-biology/biopython still has an optfeature line for dev-python/mysql-python which has been removed from the ::gentoo repository. The pure fork for it is dev-python/mysqlclient so you should test it works similarily to mysql-python, and update the optfeature line.
Comment 1 Larry the Git Cow gentoo-dev 2021-12-20 13:32:59 UTC
The bug has been referenced in the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=de858ae7cf457b2ef508edce83f809403346ac0f

commit de858ae7cf457b2ef508edce83f809403346ac0f
Author:     David Seifert <soap@gentoo.org>
AuthorDate: 2021-12-20 13:32:52 +0000
Commit:     David Seifert <soap@gentoo.org>
CommitDate: 2021-12-20 13:32:52 +0000

    sci-biology/biopython: add 1.79
    
    Bug: https://bugs.gentoo.org/757867
    Bug: https://bugs.gentoo.org/780345
    Signed-off-by: David Seifert <soap@gentoo.org>

 sci-biology/biopython/Manifest              |  1 +
 sci-biology/biopython/biopython-1.79.ebuild | 62 +++++++++++++++++++++++++++++
 2 files changed, 63 insertions(+)
Comment 2 Larry the Git Cow gentoo-dev 2021-12-30 18:12:18 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=3ca7e670a753666e8f51fc8f34f038bf18e07a69

commit 3ca7e670a753666e8f51fc8f34f038bf18e07a69
Author:     David Seifert <soap@gentoo.org>
AuthorDate: 2021-12-30 18:12:11 +0000
Commit:     David Seifert <soap@gentoo.org>
CommitDate: 2021-12-30 18:12:11 +0000

    sci-biology/biopython: drop 1.77
    
    Closes: https://bugs.gentoo.org/757867
    Closes: https://bugs.gentoo.org/780345
    Signed-off-by: David Seifert <soap@gentoo.org>

 sci-biology/biopython/Manifest              |  1 -
 sci-biology/biopython/biopython-1.77.ebuild | 61 -----------------------------
 2 files changed, 62 deletions(-)