x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -fno-diagnostics-color -c -o zoeTransition.o zoeTransition.c x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -fno-diagnostics-color -c -o zoeTrellis.o zoeTrellis.c x86_64-pc-linux-gnu-gcc -o zoe-loop -O2 -pipe -march=native -fno-diagnostics-color zoe-loop.o zoeAlignment.o zoeCDS.o zoeCounter.o zoeDNA.o zoeDistribution.o zoeDuration.o zoeFastaFile.o zoeFeature.o zoeFeatureFactory.o zoeFeatureTable.o zoeHMM.o zoeIsochore.o zoeMath.o zoeModel.o zoePhasePref.o zoeProtein.o zoeScanner.o zoeState.o zoeTools.o zoeTransition.o zoeTrellis.o -lm /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: zoeAlignment.o:(.bss+0x0): multiple definition of `zoeMethod'; zoe-loop.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/10.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: zoeAlignment.o:(.bss+0x8): multiple definition of `zoeConstructor'; zoe-loop.o:(.bss+0x8): first defined here ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.1_no-multilib-libressl_science-20201116-220441 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-10.2.0 * /usr/lib/llvm/11 11.0.0 Available Python interpreters, in order of preference: [1] python3.7 [2] python3.9 (fallback) [3] python3.8 (fallback) [4] python2.7 (fallback) The following VMs are available for generation-2: *) AdoptOpenJDK 8.272_p10 [openjdk-bin-8] Available Java Virtual Machines: [1] openjdk-bin-8 system-vm The Glorious Glasgow Haskell Compilation System, version 8.8.4 timestamp(s) of HEAD at this tinderbox image: /var/db/repos/gentoo Fri Nov 20 05:46:41 AM UTC 2020 /var/db/repos/libressl Sat Nov 7 03:06:11 PM UTC 2020 emerge -qpvO sci-biology/snap [ebuild N ] sci-biology/snap-20131129
Created attachment 673672 [details] emerge-info.txt
Created attachment 673675 [details] emerge-history.txt
Created attachment 673678 [details] environment
Created attachment 673681 [details] etc.portage.tbz2
Created attachment 673684 [details] sci-biology:snap-20131129:20201120-062726.log
Created attachment 673687 [details] temp.tbz2
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/proj/sci.git/commit/?id=76a7cb736ee17c7acb763b6752049c41a19cbb8b commit 76a7cb736ee17c7acb763b6752049c41a19cbb8b Author: Jakov Smolic <jakov.smolic@sartura.hr> AuthorDate: 2021-02-15 20:21:41 +0000 Commit: Jakov Smolic <jakov.smolic@sartura.hr> CommitDate: 2021-02-20 21:57:41 +0000 sci-biology/snap: Port to EAPI 7 Closes: https://bugs.gentoo.org/755779 Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> sci-biology/snap/files/snap-20131129-fno-common.patch | 15 +++++++++++++++ sci-biology/snap/snap-20131129.ebuild | 14 +++++++------- 2 files changed, 22 insertions(+), 7 deletions(-)