Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 731880 - sci-biology/mira fails to compile
Summary: sci-biology/mira fails to compile
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Science Biology related packages
URL:
Whiteboard:
Keywords: PMASKED
Depends on:
Blocks:
 
Reported: 2020-07-09 11:53 UTC by Agostino Sarubbo
Modified: 2021-09-28 14:32 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (build.log,9.95 KB, text/plain)
2020-07-09 11:54 UTC, Agostino Sarubbo
Details
other.tar.bz2 (other.tar.bz2,3.75 KB, application/x-bzip-compressed-tar)
2020-07-09 11:54 UTC, Agostino Sarubbo
Details

Note You need to log in before you can comment on or make changes to this bug.
Description Agostino Sarubbo gentoo-dev 2020-07-09 11:53:57 UTC
https://blogs.gentoo.org/ago/2020/07/04/gentoo-tinderbox/

Issue: sci-biology/mira fails to compile.
Discovered on: amd64  (internal ref: tinderbox)

NOTE:
This machine uses a clang/LLVM toolchain.
If you think that this issue is strictly related to clang/LLVM please block bug 408963. If you think that this issue isstrictly related to the LLD linker, please block bug 731004.
Comment 1 Agostino Sarubbo gentoo-dev 2020-07-09 11:54:03 UTC
Created attachment 648518 [details]
build.log

build log and emerge --info
Comment 2 Agostino Sarubbo gentoo-dev 2020-07-09 11:54:06 UTC
Created attachment 648520 [details]
other.tar.bz2

other logs
Comment 3 Larry the Git Cow gentoo-dev 2021-08-29 10:38:38 UTC
The bug has been referenced in the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9e8a002fb82a9b317dd6d3cf60359d0315201798

commit 9e8a002fb82a9b317dd6d3cf60359d0315201798
Author:     David Seifert <soap@gentoo.org>
AuthorDate: 2021-08-29 10:38:17 +0000
Commit:     David Seifert <soap@gentoo.org>
CommitDate: 2021-08-29 10:38:17 +0000

    profiles: last-rite sci-biology/mira
    
    Bug: https://bugs.gentoo.org/585942
    Bug: https://bugs.gentoo.org/731880
    Bug: https://bugs.gentoo.org/808667
    Signed-off-by: David Seifert <soap@gentoo.org>

 profiles/package.mask | 7 +++++++
 1 file changed, 7 insertions(+)
Comment 4 Larry the Git Cow gentoo-dev 2021-09-28 14:32:03 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=35d98adecae341f50c42caf4cea4bb264a57fd67

commit 35d98adecae341f50c42caf4cea4bb264a57fd67
Author:     Jakov Smolić <jsmolic@gentoo.org>
AuthorDate: 2021-09-28 14:31:19 +0000
Commit:     Jakov Smolić <jsmolic@gentoo.org>
CommitDate: 2021-09-28 14:31:19 +0000

    sci-biology/mira: Remove last-rited package
    
    Closes: https://bugs.gentoo.org/808667
    Closes: https://bugs.gentoo.org/585942
    Closes: https://bugs.gentoo.org/731880
    Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>

 profiles/package.mask                              |  7 --
 sci-biology/mira/Manifest                          |  2 -
 sci-biology/mira/files/mira-4.0.2-boost-1.50.patch | 22 -----
 sci-biology/mira/files/mira-4.0.2-cmath.patch      | 14 ----
 sci-biology/mira/files/mira-4.0.2-cout.patch       | 27 ------
 sci-biology/mira/metadata.xml                      | 11 ---
 sci-biology/mira/mira-4.0.2-r1.ebuild              | 97 ----------------------
 7 files changed, 180 deletions(-)