rm -f ./museq x86_64-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -o ./museq \ ./museq.o ./parameters.o ./io.o ./diag.o ./alig.o ./assemble.o ./prob.o ./orf.o ./translate.o \ -pipe -Wall -lm /usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ./parameters.o:(.bss+0x0): multiple definition of `para'; ./museq.o:(.bss+0x0): first defined here /usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ./io.o:(.bss+0x0): multiple definition of `para'; ./museq.o:(.bss+0x0): first defined here ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.1_desktop_gnome_systemd-libressl-20200125-150902 ------------------------------------------------------------------- Please see the tracker bug for details. gcc-config -l: [1] x86_64-pc-linux-gnu-9.2.0 * clang: clang version 9.0.1 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/lib/llvm/9/bin llvm: 9.0.1 Available Python interpreters, in order of preference: [1] python3.8 [2] python3.7 [3] python3.6 [4] python2.7 (fallback) Available Ruby profiles: [1] ruby24 (with Rubygems) [2] ruby25 (with Rubygems) * Available Rust versions: [1] rust-1.40.0 * java-config: The following VMs are available for generation-2: *) IcedTea JDK 3.14.0 [icedtea-bin-8] Available Java Virtual Machines: [1] icedtea-bin-8 system-vm repository: ==> /var/db/repos/gentoo/metadata/timestamp.chk <== Tue, 28 Jan 2020 19:06:20 +0000 emerge -qpvO sci-biology/dialign-tx [ebuild N ] sci-biology/dialign-tx-1.0.2-r2
Created attachment 607156 [details] emerge-info.txt
Created attachment 607158 [details] emerge-history.txt
Created attachment 607160 [details] environment
Created attachment 607162 [details] etc.portage.tbz2
Created attachment 607164 [details] sci-biology:dialign-tx-1.0.2-r2:20200128-192830.log
Created attachment 607166 [details] temp.tbz2
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=4344861bbf45ec0e259a986b19942ce284f93fc9 commit 4344861bbf45ec0e259a986b19942ce284f93fc9 Author: David Seifert <soap@gentoo.org> AuthorDate: 2020-11-01 18:35:50 +0000 Commit: David Seifert <soap@gentoo.org> CommitDate: 2020-11-01 18:35:50 +0000 sci-biology/dialign-tx: Fix -fno-common Closes: https://bugs.gentoo.org/707008 Closes: https://bugs.gentoo.org/727966 Package-Manager: Portage-3.0.8, Repoman-3.0.2 Signed-off-by: David Seifert <soap@gentoo.org> sci-biology/dialign-tx/dialign-tx-1.0.2-r2.ebuild | 13 +++++++------ .../files/dialign-tx-1.0.2-fno-common.patch | 22 ++++++++++++++++++++++ .../files/dialign-tx-1.0.2-gnu89-inline.patch | 20 ++++++++++++++++++++ 3 files changed, 49 insertions(+), 6 deletions(-)
