* Package:    sci-biology/dialign-tx-1.0.2-r2
 * Repository: gentoo
 * Maintainer: sci-biology@gentoo.org
 * USE:        abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU
 * FEATURES:   network-sandbox preserve-libs sandbox userpriv usersandbox
>>> Unpacking source...
>>> Unpacking DIALIGN-TX_1.0.2.tar.gz to /var/tmp/portage/sci-biology/dialign-tx-1.0.2-r2/work
>>> Source unpacked in /var/tmp/portage/sci-biology/dialign-tx-1.0.2-r2/work
>>> Preparing source in /var/tmp/portage/sci-biology/dialign-tx-1.0.2-r2/work/DIALIGN-TX_1.0.2 ...
 * Applying dialign-tx-1.0.2-fix-build-system.patch ...
 [ ok ]
 * Applying dialign-tx-1.0.2-implicits.patch ...
 [ ok ]
 * Applying dialign-tx-1.0.2-modernize.patch ...
 [ ok ]
 * Applying dialign-tx-1.0.2-gnu89-inline.patch ...
 [ ok ]
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-biology/dialign-tx-1.0.2-r2/work/DIALIGN-TX_1.0.2 ...
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-biology/dialign-tx-1.0.2-r2/work/DIALIGN-TX_1.0.2 ...
make -j1 -C source clean 
make: Entering directory '/var/tmp/portage/sci-biology/dialign-tx-1.0.2-r2/work/DIALIGN-TX_1.0.2/source'
rm -rf *.o *rtl *jump *addre* *cfg *life *reg *reload *flow* *stack  museq dialign-tx
make: Leaving directory '/var/tmp/portage/sci-biology/dialign-tx-1.0.2-r2/work/DIALIGN-TX_1.0.2/source'
make -j1 -C source 
make: Entering directory '/var/tmp/portage/sci-biology/dialign-tx-1.0.2-r2/work/DIALIGN-TX_1.0.2/source'
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -fno-common   -c -o museq.o museq.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -fno-common   -c -o parameters.o parameters.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -fno-common   -c -o io.o io.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -fno-common   -c -o diag.o diag.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -fno-common   -c -o alig.o alig.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -fno-common   -c -o assemble.o assemble.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -fno-common   -c -o prob.o prob.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -fno-common   -c -o orf.o orf.c
x86_64-pc-linux-gnu-gcc -O2 -pipe -march=native -fno-common   -c -o translate.o translate.c
rm -f ./museq
x86_64-pc-linux-gnu-gcc -Wl,-O1 -Wl,--as-needed -o ./museq \
./museq.o ./parameters.o ./io.o ./diag.o ./alig.o ./assemble.o ./prob.o ./orf.o ./translate.o  \
-pipe -Wall -lm 
/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ./parameters.o:(.bss+0x0): multiple definition of `para'; ./museq.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ./io.o:(.bss+0x0): multiple definition of `para'; ./museq.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ./diag.o:(.bss+0x0): multiple definition of `para'; ./museq.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ./alig.o:(.bss+0x8): multiple definition of `para'; ./museq.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ./assemble.o:(.bss+0x0): multiple definition of `para'; ./museq.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ./prob.o:(.bss+0x0): multiple definition of `para'; ./museq.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ./orf.o:(.bss+0x0): multiple definition of `para'; ./museq.o:(.bss+0x0): first defined here
/usr/lib/gcc/x86_64-pc-linux-gnu/9.2.0/../../../../x86_64-pc-linux-gnu/bin/ld: ./translate.o:(.bss+0x0): multiple definition of `para'; ./museq.o:(.bss+0x0): first defined here
collect2: error: ld returned 1 exit status
make: *** [Makefile:34: museq] Error 1
make: Leaving directory '/var/tmp/portage/sci-biology/dialign-tx-1.0.2-r2/work/DIALIGN-TX_1.0.2/source'
 * ERROR: sci-biology/dialign-tx-1.0.2-r2::gentoo failed (compile phase):
 *   emake failed
 * 
 * If you need support, post the output of `emerge --info '=sci-biology/dialign-tx-1.0.2-r2::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=sci-biology/dialign-tx-1.0.2-r2::gentoo'`.
 * The complete build log is located at '/var/log/portage/sci-biology:dialign-tx-1.0.2-r2:20200128-192830.log'.
 * For convenience, a symlink to the build log is located at '/var/tmp/portage/sci-biology/dialign-tx-1.0.2-r2/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sci-biology/dialign-tx-1.0.2-r2/temp/environment'.
 * Working directory: '/var/tmp/portage/sci-biology/dialign-tx-1.0.2-r2/work/DIALIGN-TX_1.0.2'
 * S: '/var/tmp/portage/sci-biology/dialign-tx-1.0.2-r2/work/DIALIGN-TX_1.0.2'