>>> /usr/bin/asmToAGP.pl >>> /usr/bin/ca2ace.pl >>> /usr/bin/caqc_help.ini >>> /usr/bin/caqc.pl >>> /usr/bin/convert-fasta-to-v2.pl ... It seems that someone mistakenly took bindir for top directory of Windows package layout. This includes 101 files in total, all unprefixed, some with collision-prone names such as 'simple' or 'mask', some not even proper executables (like that .ini file).
The bug has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=3bb969235bd365889ce11029fabbf20b50baed7c commit 3bb969235bd365889ce11029fabbf20b50baed7c Author: David Seifert <soap@gentoo.org> AuthorDate: 2021-08-05 08:33:24 +0000 Commit: David Seifert <soap@gentoo.org> CommitDate: 2021-08-05 08:33:24 +0000 profiles: last-rite sci-biology/wgs-assembler Bug: https://bugs.gentoo.org/610094 Bug: https://bugs.gentoo.org/715874 Bug: https://bugs.gentoo.org/731860 Bug: https://bugs.gentoo.org/739486 Signed-off-by: David Seifert <soap@gentoo.org> profiles/package.mask | 7 +++++++ 1 file changed, 7 insertions(+)
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=646bf3998bdd7dce3da0f3ad2bd03e201361a391 commit 646bf3998bdd7dce3da0f3ad2bd03e201361a391 Author: Jakov Smolić <jsmolic@gentoo.org> AuthorDate: 2021-09-04 06:56:40 +0000 Commit: Jakov Smolić <jsmolic@gentoo.org> CommitDate: 2021-09-04 07:01:52 +0000 sci-biology/wgs-assembler: Remove last-rited package Closes: https://bugs.gentoo.org/610094 Closes: https://bugs.gentoo.org/715874 Closes: https://bugs.gentoo.org/731860 Closes: https://bugs.gentoo.org/739486 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org> profiles/package.mask | 7 - sci-biology/wgs-assembler/Manifest | 1 - .../files/wgs-assembler-7.0-build.patch | 257 --------------------- .../files/wgs-assembler-7.0-libtirpc.patch | 16 -- sci-biology/wgs-assembler/metadata.xml | 11 - .../wgs-assembler/wgs-assembler-7.0-r2.ebuild | 66 ------ 6 files changed, 358 deletions(-)
