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Bug 587338 - [science ovelay] sci-libs/mkl-11.3.2.181 - Error in install phase: Can't load module alternatives
Summary: [science ovelay] sci-libs/mkl-11.3.2.181 - Error in install phase: Can't load...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Overlays (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Gentoo Science Related Packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2016-06-27 20:34 UTC by Juergen Rose
Modified: 2020-11-09 07:38 UTC (History)
3 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
build.log (build.log,6.12 KB, text/x-log)
2016-06-27 20:34 UTC, Juergen Rose
Details

Note You need to log in before you can comment on or make changes to this bug.
Description Juergen Rose 2016-06-27 20:34:06 UTC
Created attachment 439018 [details]
build.log

'MAKEOPTS=-j1 emerge -v1 mkl' fails with:
...
>>> Install mkl-11.3.2.181 into /var/tmp/portage/sci-libs/mkl-11.3.2.181/image/ category sci-libs
 * Cleaning out uninstall ...                                            [ ok ]
 * Cleaning out japanese language directories ...                        [ ok ]
 * Cleaning out documentation ...                                        [ ok ]
 * Cleaning out examples ...                                             [ ok ]
 * Cleaning out eclipse files ...                                        [ ok ]
 * Tagging mkl ...                                                       [ ok ]
 * Removing broken symlinks ...                                          [ ok ]
 * amd64_int32: running numeric-int64-multibuild_multilib_wrapper mkl_add_pc_file
 * amd64_int32: running numeric-int64-multibuild_multilib_wrapper pc_file blas mkl-gfortran
 * int32: running numeric-int64-multibuild_multilib_wrapper pc_install blas mkl-gfortran
!!! Error: Can't load module alternatives
exiting
 * ERROR: sci-libs/mkl-11.3.2.181::science failed (install phase):






root@lynx:/root(16)# emerge --info '=sci-libs/mkl-11.3.2.181::science'
Portage 2.3.0 (python 3.4.4-final-0, default/linux/amd64/13.0/desktop, gcc-5.4.0, glibc-2.23-r2, 4.6.3-gentoo x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-4.6.3-gentoo-x86_64-Intel-R-_Core-TM-_i7-3630QM_CPU_@_2.40GHz-with-gentoo-2.2
KiB Mem:    15207080 total,    904272 free
KiB Swap:   50331644 total,  50208436 free
Timestamp of repository gentoo: Mon, 27 Jun 2016 18:30:01 +0000
sh bash 4.3_p46
ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1
distcc[9152] (dcc_trace_version) distcc 3.2rc1 x86_64-pc-linux-gnu; built Dec 12 2015 19:11:03 [disabled]
app-shells/bash:          4.3_p46::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.24.0-r1::gentoo
dev-lang/python:          2.7.11-r2::gentoo, 3.4.4::gentoo, 3.5.1-r3::gentoo
dev-util/cmake:           3.5.2-r1::gentoo
dev-util/pkgconfig:       0.29.1::gentoo
sys-apps/baselayout:      2.2::gentoo
sys-apps/openrc:          0.21::gentoo
sys-apps/sandbox:         2.10-r2::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r2::gentoo
sys-devel/automake:       1.9.6-r4::gentoo, 1.11.6-r2::gentoo, 1.12.6-r1::gentoo, 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15-r2::gentoo
sys-devel/binutils:       2.25.1-r1::gentoo
sys-devel/gcc:            4.9.3::gentoo, 5.3.0::gentoo, 5.4.0::gentoo
sys-devel/gcc-config:     1.8-r1::gentoo
sys-devel/libtool:        2.4.6-r2::gentoo
sys-devel/make:           4.2.1::gentoo
sys-kernel/linux-headers: 4.6::gentoo (virtual/os-headers)
sys-libs/glibc:           2.23-r2::gentoo
Repositories:

gentoo
    location: /usr/portage_lynx
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000

local
    location: /usr/local/portage
    masters: gentoo
    priority: 0

g-cpan
    location: /var/lib/cpan
    masters: gentoo
    priority: 1

g-octave
    location: /var/lib/g-octave
    masters: gentoo
    priority: 2

activehome
    location: /var/lib/layman/activehome
    masters: gentoo
    priority: 50

ago
    location: /var/lib/layman/ago
    masters: gentoo
    priority: 50

sage-on-gentoo
    location: /var/lib/layman/sage-on-gentoo
    masters: gentoo science
    priority: 50

science
    location: /var/lib/layman/science
    masters: gentoo
    priority: 50

sunrise
    location: /var/lib/layman/sunrise
    masters: gentoo
    priority: 50

tlp
    location: /var/lib/layman/tlp
    masters: gentoo
    priority: 50

x11
    location: /var/lib/layman/x11
    masters: gentoo
    priority: 50

Installed sets: @system
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA PUEL Intel-SDP dlj-1.1 skype-eula skype-4.0.0.7-copyright googleearth AdobeFlash-11.x cadsoft Oracle-BCLA-JavaSE MakeMKV-EULA NVIDIA-CUDA Nero-AAC-EULA GIMPS"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /etc/stunnel/stunnel.conf /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php7.0/ext-active/ /etc/php/cgi-php7.0/ext-active/ /etc/php/cli-php7.0/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-march=native -O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j9"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="64bit R X Xaw3d a52 aac acl acpi admin afs alsa amd64 amr ao apache2 apng applet archive armadillo arpack asf aspell assistant atlas audacious audiofile aufs automap automount barcode bash-completion berkdb blas blast bluetooth bluray boost branding btrfs bzip2 cairo cdda cddb cdf cdio cdparanoia cdr cg cgi chm cilk cli cmake collada consolekit contrib cracklib crypt css cups curl cxx daap db dbi dbm dbus declarative designer devhelp device-mapper dga dia digitalradio djvu doc dot dri ds2490 ds9097 ds9097u dts dv dvb dvd dvdr dvi dynamicplugin eds egl elf emacs emboss emf encode epiphany evo examples excel exif expat extensions extra extras faac faad fam ffmpeg fftw firefox fits flac fltk fontconfig foomaticdb fortran fortran95 fpm fpx ftp fuse gcj gd gdal gdbm gedit geoip geolocation geos gfortran gif gimp git glade glamor glib glpk gml gmp gnome gnome-keyring gnuplot gnutls gold gphoto2 gpm grammar graphics graphtft graphviz grass gsl gsm gstreamer gtk gtk3 gudev guile hdaps hddtemp hdf hdf5 hdri html http httpd hvm hwdb iconv icq icu id3tag ide imagemagick imap inotify introspection ipod ipv6 irda ithreads jadetex java jbig jit john jpeg jpeg2k kate kde kdepim kdrive kerberos keymap kpathsea kvm ladspa lame lapack latex lcms ldap lensfun libffi libgda libkms libnotify libsamplerate lirc live lm_sensors lua lzma lzo mad mail maildir mapnik math matroska media-library mercurial mikmod mkl mmx mmxext mng mod modules mono motif mozilla mp3 mp4 mpeg mpi mpi-threads mplayer mtp multilib multimedia musepack musicbrainz mysql mysqli nautilus ncurses neXt netcdf netpbm network networking nfs nls nntp nptl nsplugin ntfs ntp numpy obex objc ocaml ocr octave odbc ofa ogdi ogg opencl opencv openexr opengl openmp openvg pam pango pcre pda pdf pdl2 perl plasma plotutils plugins png podcast policykit portaudio posix postgres postscript ppds preview-latex proj projectm pstricks pulseaudio python q16 q32 qemu qhull qt3support qt4 qt5 quicktime raw readline reiserfs reports rle romio rpc rrdcgi rrdtool rtlsdr sage samba sasl schroedinger science sdk sdl seccomp secure-delete semantic-desktop server session shout sip slang slp smart smbclient smp sms sndfile snmp soap sockets sound soup sox speex spell sql sqlite sse sse2 ssl startup-notification stlport subtitles subversion sudo suexec svg svm swig systemd szip t1lib tbb tcl tcpd tex tex4ht texmacs theora thesaurus thinkpad threads thunderbird tidy tiff tk tools truetype udev udisks unicode upower usb utempter v4l v4l2 vaapi vala valgrind vdpau video vim-syntax virt-network virtualbox visio vorbis vpx vtk wav wayland webdav webdav-serf webkit wifi wmf wxwidgets x264 xa xattr xcb xetex xft xine xml xmlreader xmlrpc xpm xv xvid xvmc yaml youtube zlib zsh-completion zvbi" ABI_X86="64" ALSA_CARDS="intel8x0" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_core authn_dbm authn_default authn_file authz_core authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info lbmethod_byrequests log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif slotmem_shm so socache_shmcb speling status unique_id unixd userdir usertrack vhost_alias" APACHE2_MPMS="worker" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="canon fuji ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog sensors thermal" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" CURL_SSL="nss" DVB_CARDS="usb-wt220u dvb_usb_rtl28xxu" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev synaptics void" KERNEL="linux" L10N="de en fr ru" LCD_DEVICES="cfontz hd44780 mtxorb ncurses X lcd2usb lcdlinux png usblcd SureElec" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de en fr ru" LIRC_DEVICES="devinput" NETBEANS_MODULES="apisupport cnd dlight enterprise ergonomics groovy gsf harness ide identity j2ee java mobility nb php profiler websvccommon xml" OFFICE_IMPLEMENTATION="libreoffice" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" QEMU_SOFTMMU_TARGETS="arm i386 x86_64" QEMU_USER_TARGETS="arm i386 x86_64" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="nouveau displaylink" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

=================================================================
                        Package Settings
=================================================================

sci-libs/mkl-11.3.2.181::science was built with the following:
USE="doc examples -int64 -mic" ABI_X86="64 -32" LINGUAS="-ja"




root@lynx:/root(17)# emerge -pqv '=sci-libs/mkl-11.3.2.181::science'
[ebuild   R   ] sci-libs/mkl-11.3.2.181  USE="doc examples -int64 -mic" ABI_X86="(64) -32" LINGUAS="-ja"
Comment 1 Juergen Rose 2016-07-05 08:45:05 UTC
I hit the error on the next system:

root@sysresccd:/(25)# emerge --info '=sci-libs/mkl-11.3.2.181::science'
Portage 2.3.0 (python 3.4.4-final-0, default/linux/amd64/13.0/desktop, gcc-5.4.0, glibc-2.23-r2, 3.18.25-std471-amd64 x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-3.18.25-std471-amd64-x86_64-Intel-R-_Core-TM-_i7-4770_CPU_@_3.40GHz-with-gentoo-2.2
KiB Mem:    16370220 total,   1248924 free
KiB Swap:          0 total,         0 free
Timestamp of repository gentoo: Sun, 03 Jul 2016 16:00:01 +0000
sh bash 4.3_p46
ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1
app-shells/bash:          4.3_p46::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.24.0-r1::gentoo
dev-lang/python:          2.7.11-r2::gentoo, 3.4.4::gentoo, 3.5.1-r3::gentoo
dev-util/cmake:           3.5.2-r1::gentoo
dev-util/pkgconfig:       0.29.1::gentoo
sys-apps/baselayout:      2.2-r1::gentoo
sys-apps/openrc:          0.21.1::gentoo
sys-apps/sandbox:         2.10-r2::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r2::gentoo
sys-devel/automake:       1.11.6-r2::gentoo, 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15-r2::gentoo
sys-devel/binutils:       2.25.1-r1::gentoo
sys-devel/gcc:            5.4.0::gentoo
sys-devel/gcc-config:     1.8-r1::gentoo
sys-devel/libtool:        2.4.6-r2::gentoo
sys-devel/make:           4.2.1::gentoo
sys-kernel/linux-headers: 4.6::gentoo (virtual/os-headers)
sys-libs/glibc:           2.23-r2::gentoo
Repositories:

gentoo
    location: /usr/portage_grizzly
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000

x-portage
    location: /usr/local/portage
    masters: gentoo
    priority: 0

g-cpan
    location: /var/lib/cpan
    masters: gentoo
    priority: 1

g-octave
    location: /var/lib/g-octave
    masters: gentoo
    priority: 2

sage-on-gentoo
    location: /var/lib/layman/sage-on-gentoo
    masters: gentoo science
    priority: 50

science
    location: /var/lib/layman/science
    masters: gentoo
    priority: 50

sunrise
    location: /var/lib/layman/sunrise
    masters: gentoo
    priority: 50

x11
    location: /var/lib/layman/x11
    masters: gentoo
    priority: 50

ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=core-avx2 -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php7.0/ext-active/ /etc/php/cgi-php7.0/ext-active/ /etc/php/cli-php7.0/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=core-avx2 -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://gentoo.inode.at/ ftp://gentoo.inode.at/source/ http://gd.tuwien.ac.at/opsys/linux/gentoo/ ftp://gd.tuwien.ac.at/opsys/linux/gentoo/ http://gentoo.supp.name/ rsync://ftp6.linux.cz/pub/linux/gentoo/ rsync://ftp.fi.muni.cz/pub/linux/gentoo/ ftp://ftp.fi.muni.cz/pub/linux/gentoo/ rsync://trumpetti.atm.tut.fi/gentoo/ ftp://trumpetti.atm.tut.fi/gentoo/ http://trumpetti.atm.tut.fi/gentoo/ ftp://de-mirror.org/gentoo/ http://de-mirror.org/gentoo/ rsync://de-mirror.org/gentoo/ ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo http://mirror.netcologne.de/gentoo/ ftp://mirror.netcologne.de/gentoo/ rsync://mirror.netcologne.de/gentoo/ http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror/ ftp://ftp.halifax.rwth-aachen.de/gentoo/ http://ftp.halifax.rwth-aachen.de/gentoo/ rsync://ftp.halifax.rwth-aachen.de/gentoo/ ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo ftp://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ http://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ ftp://ftp.uni-erlangen.de/pub/mirrors/gentoo http://ftp.uni-erlangen.de/pub/mirrors/gentoo ftp://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ rsync://ftp-stud.hs-esslingen.de/gentoo/ http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ ftp://ftp.snt.utwente.nl/pub/os/linux/gentoo http://ftp.snt.utwente.nl/pub/os/linux/gentoo rsync://ftp.snt.utwente.nl/gentoo rsync://gentoo.prz.rzeszow.pl/gentoo http://gentoo.prz.rzeszow.pl http://gentoo.po.opole.pl rsync://ftp.vectranet.pl/gentoo/ http://ftp.vectranet.pl/gentoo/ ftp://ftp.vectranet.pl/gentoo/ http://gentoo.mirror.pw.edu.pl/"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j9"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="64bit R X Xaw3d a52 aac acl acpi admin alsa amd64 amr ao apache2 apng applet archive armadillo arpack asf aspell assistant atlas audacious audiofile automap automount barcode bash-completion berkdb blas blast bluetooth bluray boost branding btrfs bzip2 cairo cdda cddb cdf cdio cdparanoia cdr cg cgi chm cilk clamav clamd cli cmake collada consolekit contrib cracklib crypt css cups curl cxx daap db dbi dbm dbus declarative designer devhelp device-mapper dga dia digitalradio djvu doc dot dri ds2490 ds9097 ds9097u dts dv dvb dvd dvdr dvi dynamicplugin eds egl elf emacs emboss emf encode epiphany evo examples excel exif expat extensions extra extras faac faad fam ffmpeg fftw firefox fits flac fltk fontconfig foomaticdb fortran fortran95 fpm fpx ftdi ftp fuse gcj gd gdal gdbm gedit geoip geolocation geos gfortran gif gimp git glade glamor glib glpk gml gmp gnome gnome-keyring gnuplot gnutls gold gphoto2 gpm grammar graphics graphtft graphviz gsl gsm gstreamer gtk gtk3 gudev guile hddtemp hdf hdf5 hdri html http httpd hvm hwdb iconv icq icu id3tag ide imagemagick imap inotify introspection ipod ipv6 irda ithreads jadetex java jbig jit john jpeg jpeg2k kate kdrive kerberos keymap kpathsea kvm ladspa lame lapack latex lcms ldap lensfun libffi libgda libkms libnotify libsamplerate lirc live lm_sensors lua lzma lzo mad mail maildir math matroska media-library mercurial mikmod mkl mmx mmxext mng modules mono motif mozilla mp3 mp4 mpeg mpi mpi-threads mplayer mtp multilib multimedia musepack musicbrainz mysql mysqli nautilus ncurses netcdf netpbm network networking nfs nls nntp nptl numpy obex ocaml ocr octave odbc ogg opencv openexr opengl openmp pam pango pcre pdf pdl2 perl plotutils plugins png policykit postgres postscript ppds preview-latex pstricks python q32 qemu qt3support qt4 qt5 raw readline romio rpc sage samba sasl science sdl seccomp server session slang slp smart smbclient smp sndfile snmp sockets sox speex spell sql sqlite sse sse2 ssl startup-notification subversion sudo svg svm swig systemd szip t1lib tbb tcl tcpd tex tex4ht texmacs theora thesaurus threads thunderbird tidy tiff tk tools truetype udev udisks unicode upower usb utempter v4l v4l2 vaapi vala valgrind vdpau video vim-syntax virt-network virtualbox visio vorbis vpx vtk wav wayland webkit wmf wxwidgets x264 xa xattr xcb xetex xft xine xml xmlreader xmlrpc xpm xv xvid yaml youtube zlib zsh-completion" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="canon fuji ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 fma3 mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" CURL_SSL="nss" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="emu efi-64 pc xen" INPUT_DEVICES="keyboard mouse evdev void" KERNEL="linux" L10N="de en fr ru" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de en fr ru" LIRC_DEVICES="devinput" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="intel i965 radeon" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

=================================================================
                        Package Settings
=================================================================

sci-libs/mkl-11.3.2.181::science was built with the following:
USE="doc examples -int64 -mic" ABI_X86="64 -32" LINGUAS="-ja"
Comment 2 François Bissey 2016-07-05 09:00:53 UTC
If you can't load the module "allternative" that means you don't have eselect from the science overlay. Check you have followed the instructions at 
https://wiki.gentoo.org/wiki/User_talk:Houseofsuns
in particular masking eselect from the main tree.
Comment 3 Florian D. 2017-12-10 21:33:30 UTC
I have eselect from the science overlay, the error messages appear nevertheless.
But it is possible to choose the mkl modules afterwards via eselect.

[I] app-admin/eselect
     Verfügbare Versionen:   [m]1.4.8 [m](~)1.4.9 (~)1.4.9-r100[1] **9999[1] [m]**9999 {doc emacs vim-syntax}
     Installierte Versionen: 1.4.9-r100[1](16:32:21 26.10.2017)(-doc -emacs -vim-syntax)
     Startseite:             http://wiki.gentoo.org/wiki/Project:Eselect
     Beschreibung:           Gentoo's multi-purpose configuration and management tool
[1] "science" /var/gentoo/repositories/layman/science


Portage 2.3.17 (python 3.5.4-final-0, default/linux/amd64/17.0/desktop/plasma, gcc-7.2.0, glibc-2.26-r3, 4.14.4 x86_64)
=================================================================
System uname: Linux-4.14.4-x86_64-AMD_Ryzen_Threadripper_1950X_16-Core_Processor-with-gentoo-2.4.1
KiB Mem:    32876592 total,  19700068 free
KiB Swap:    7270396 total,   7270396 free
Timestamp of repository gentoo: Sat, 09 Dec 2017 02:00:02 +0000
Head commit of repository gentoo: 2427abd3ef8dda61749a615949cb9afdd37e2ca9
sh bash 4.4_p12
ld GNU ld (Gentoo 2.29.1 p3) 2.29.1
app-shells/bash:          4.4_p12::gentoo
dev-java/java-config:     2.2.0-r3::gentoo
dev-lang/perl:            5.26.1-r1::gentoo
dev-lang/python:          2.7.14-r1::gentoo, 3.4.6::gentoo, 3.5.4-r1::gentoo
dev-util/cmake:           3.10.0::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.4.1-r2::gentoo
sys-apps/openrc:          0.34.11::gentoo
sys-apps/sandbox:         2.12::gentoo
sys-devel/autoconf:       2.13::gentoo, 2.69-r4::gentoo
sys-devel/automake:       1.15.1-r1::gentoo
sys-devel/binutils:       2.29.1-r1::gentoo
sys-devel/gcc:            6.4.0::gentoo, 7.2.0::gentoo
sys-devel/gcc-config:     1.9.0-r1::gentoo
sys-devel/libtool:        2.4.6-r4::gentoo
sys-devel/make:           4.2.1-r1::gentoo
sys-kernel/linux-headers: 4.13::gentoo (virtual/os-headers)
sys-libs/glibc:           2.26-r3::gentoo
Repositories:

kde
    location: /var/gentoo/repositories/layman/kde
    masters: gentoo
    priority: 0

steam-overlay
    location: /var/gentoo/repositories/layman/steam-overlay
    masters: gentoo
    priority: 1

mozilla
    location: /var/gentoo/repositories/layman/mozilla
    masters: gentoo
    priority: 2

x11
    location: /var/gentoo/repositories/layman/x11
    masters: gentoo
    priority: 3

science
    location: /var/gentoo/repositories/layman/science
    masters: gentoo
    priority: 4

x-florian-overlay
    location: /etc/portage/florian-overlay
    masters: gentoo
    priority: 5

gentoo
    location: /var/gentoo/repositories/portage
    sync-type: rsync
    sync-uri: rsync://stimpy/stimpy-portage
    priority: 9999
    sync-rsync-extra-opts: 
    sync-rsync-vcs-ignore: true

Installed sets: @kde-baseapps, @kde-frameworks
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe -march=znver1"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -pipe -march=znver1"
DISTDIR="/var/gentoo/distfiles/"
EMERGE_DEFAULT_OPTS="--autounmask=n --quiet-build=n"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync multilib-strict news parallel-fetch parallel-install preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://mirror.leaseweb.com/gentoo/ http://gentoo.mirror.web4u.cz/ http://mirror.netcologne.de/gentoo/ http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ http://ftp.fi.muni.cz/pub/linux/gentoo/ http://gentoo.mirrors.ovh.net/gentoo-distfiles/ http://gd.tuwien.ac.at/opsys/linux/gentoo/ http://de-mirror.org/gentoo/"
LANG="de_DE.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,-z,now,--as-needed,-O1,--hash-style=gnu,--sort-common"
MAKEOPTS="-j32"
PKGDIR="/var/gentoo/packages/amd64/"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/tmp"
USE="3dnow 3dnowext X a52 aac aalib acl acpi activities aes alsa amd64 apache2 atlas audiofile authdaemond avi avx bash-completion berkdb blas branding bzip2 bzlib cairo calendar cdda cddb cdparanoia cdr cleartype cli consolekit corefonts cracklib crypt cups cxx dbus declarative dga divx4linux dri dts dvb dvd dvdr dvdread elogind emboss encode exif f77 fam fbcon ffmpeg fftw firefox flac fma3 fma4 fortran ftp gallium gdbm gif ginac glamor gphoto2 gpm gps grub gtk gtk3 i-doc iconv icq imap ipv6 java6 javascript jpeg jpeg2k junit kde kipi kwallet lapack latex lcms libnotify libwww lm_sensors mad maildir mercurial mime mmap mmx mmxext mng modules mozilla mozsvg mp3 mp4 mpeg msn multilib mysqli ncurses network networkmanager nls nptl nsplugin obcd objc ogg openexr opengl openmp pam pam_timestamp pango pch pcre pda pdf pdflib phonon pic pie plasma plotutils png policykit popcnt postgres postscript ppds private-headers python qml qt3support qt5 quicktime readline ruby samba sasl scanner sdl seccomp semantic-desktop session skey slp smp sndfile snmp sox speex spell sse sse2 sse3 sse4_1 sse4_2 sse4a ssl ssse3 startup-notification svg sysfs system-cairo system-harfbuzz system-icu system-jpeg system-libevent system-libvpx system-sqlite tbb tcpd theora threads tiff truetype udev udisks unicode upnp upnp-av upower usb v4l2 vcd vdpau vorbis wayland widgets win32codecs wmf wxwidgets x264 xanim xattr xcb xcomposite xine xinerama xml xop xprint xulrunner xv xvid zlib zvbi" ABI_X86="64 32" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_core authz_core authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif slotmem_shm so socache_shmcb speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="braindump flow karbon kexi krita stage tables words sheets plan" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="sse3 fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt pdpe1gb rdtscp lm constant_tsc rep_good nopl nonstop_tsc cpuid extd_apicid amd_dcm aperfmperf pni pclmulqdq monitor ssse3 fma cx16 sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand lahf_lm cmp_legacy svm extapic cr8_legacy abm sse4a misalignsse 3dnowprefetch osvw skinit wdt tce topoext perfctr_core perfctr_nb bpext perfctr_l2 mwaitx hw_pstate vmmcall fsgsbase bmi1 avx2 smep bmi2 rdseed adx smap clflushopt sha_ni xsaveopt xsavec xgetbv1 xsaves clzero irperf arat npt lbrv svm_lock nrip_save tsc_scale vmcb_clean flushbyasid decodeassists pausefilter pfthreshold avic v_vmsave_vmload overflow_recov succor smca" ELIBC="glibc" ENLIGHTENMENT_MODULES="backlight clock comp conf-applications conf-dialogs conf-display conf-edgebindings conf-interaction conf-intl conf-keybindings conf-menus conf-paths conf-performance conf-randr conf-shelves conf-theme conf-window-manipulation conf-window-remembers connman cpufreq dropshadow everything fileman fileman-opinfo gadman ibar ibox illume2 mixer msgbus notification pager quickaccess shot start syscon systray tasks temperature tiling winlist wizard xkbswitch" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer nlpsolver pdfimport" LINGUAS="en_GB en de" LLVM_TARGETS="X86" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-0" POSTGRES_TARGETS="postgres9_5" PYTHON_SINGLE_TARGET="python3_5" PYTHON_TARGETS="python2_7 python3_5" QEMU_SOFTMMU_TARGETS="x86_64" QEMU_USER_TARGETS="x86_64" RUBY_TARGETS="ruby22 ruby23 ruby24" USERLAND="GNU" VIDEO_CARDS="amdgpu radeonsi" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 4 Larry the Git Cow gentoo-dev 2020-11-09 07:38:22 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=56846e03ed7c84387775b9ef6b99f8fdf65add10

commit 56846e03ed7c84387775b9ef6b99f8fdf65add10
Author:     Aisha Tammy <gentoo@aisha.cc>
AuthorDate: 2020-11-05 13:47:11 +0000
Commit:     Benda Xu <heroxbd@gentoo.org>
CommitDate: 2020-11-09 07:38:13 +0000

    sci-libs/mkl: version bump to 2020.4.304
    
    Use eselect-ldso mechanism.
    Respect Prefix.
    
    Closes: https://bugs.gentoo.org/587338
    Closes: https://bugs.gentoo.org/592662
    Closes: https://bugs.gentoo.org/747304
    Closes: https://bugs.gentoo.org/260810
    Closes: https://bugs.gentoo.org/715548
    Closes: https://bugs.gentoo.org/719976
    
    Reported-by: Juergen Rose, François Bissey, Florian D., Martin Mokrejš
    Reported-by: Michel Lang, juantxorena@gmail.com, Chris Larson, jorge
    
    Package-Manager: Portage-3.0.8, Repoman-3.0.1
    Signed-off-by: Aisha Tammy <gentoo@aisha.cc>
    Signed-off-by: Benda Xu <heroxbd@gentoo.org>

 sci-libs/mkl/Manifest              |   1 +
 sci-libs/mkl/mkl-2020.4.304.ebuild | 230 +++++++++++++++++++++++++++++++++++++
 2 files changed, 231 insertions(+)