>>> Installing (2 of 4) sci-libs/blas-reference-20131116-r1::science >>> needed sym /usr/lib64/blas/reference/libblas.so.0 >>> needed obj /usr/lib64/blas/reference/libblas.so.0.0.0 !!! Error: Action update unknown exiting * eselect blas update returned !!! Error: File "//etc/env.d/blas/lib64/reference" is missing! Call stack: * iface_do_show (skel.bash:143) * do_show (skel.bash:283) * check_do (core.bash:24) * do_action (core.bash:105) * main (eselect:309) exiting * Creating Alternative for blas !!! Error: Action update unknown exiting See-Also: bug #563292, bug #563288, bug #563674, bug #546858 Reproducible: Always # emerge --info blas-reference lapack-reference gsl Portage 2.2.23 (python 3.4.3-final-0, default/linux/amd64/13.0/desktop/plasma/systemd, gcc-4.9.3, glibc-2.22-r1, 4.2.5-gentoo x86_64) ================================================================= System Settings ================================================================= System uname: Linux-4.2.5-gentoo-x86_64-AMD_A10-7800_Radeon_R7,_12_Compute_Cores_4C+8G-with-gentoo-2.2 KiB Mem: 15381424 total, 7617672 free KiB Swap: 0 total, 0 free Timestamp of repository gentoo: Sat, 31 Oct 2015 08:15:01 +0000 sh bash 4.3_p42 ld GNU ld (Gentoo 2.25 p1.2) 2.25 ccache version 3.2.4 [disabled] app-shells/bash: 4.3_p42::gentoo dev-java/java-config: 2.2.0::gentoo dev-lang/perl: 5.22.0::gentoo dev-lang/python: 2.7.10::gentoo, 3.3.5-r1::gentoo, 3.4.3::gentoo dev-util/ccache: 3.2.4::gentoo dev-util/cmake: 3.3.2-r1::gentoo dev-util/pkgconfig: 0.29::gentoo sys-apps/baselayout: 2.2::gentoo sys-apps/sandbox: 2.9::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69-r1::gentoo sys-devel/automake: 1.11.6-r1::gentoo, 1.12.6::gentoo, 1.13.4::gentoo, 1.14.1::gentoo, 1.15::gentoo sys-devel/binutils: 2.25-r1::gentoo sys-devel/gcc: 4.9.3::gentoo sys-devel/gcc-config: 1.8-r1::gentoo sys-devel/libtool: 2.4.6-r1::gentoo sys-devel/make: 4.1-r1::gentoo sys-kernel/linux-headers: 4.2::gentoo (virtual/os-headers) sys-libs/glibc: 2.22-r1::gentoo Repositories: gentoo location: /var/cache/portage/gentoo sync-type: rsync sync-uri: rsync://rsync.de.gentoo.org/gentoo-portage priority: -1000 aegypius location: /var/lib/layman/aegypius sync-type: laymansync sync-uri: git://github.com/aegypius/overlay.git masters: gentoo priority: 50 kde location: /var/lib/layman/kde sync-type: laymansync sync-uri: git://anongit.gentoo.org/proj/kde.git masters: gentoo priority: 50 sage-on-gentoo location: /var/lib/layman/sage-on-gentoo sync-type: laymansync sync-uri: git://github.com/cschwan/sage-on-gentoo.git masters: gentoo science priority: 50 science location: /var/lib/layman/science sync-type: laymansync sync-uri: git://anongit.gentoo.org/proj/sci.git masters: gentoo priority: 50 local location: /var/cache/portage/local masters: gentoo priority: 100 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* -@EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-pipe -O2 -march=bdver3" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/themes/oxygen-gtk/gtk-2.0 /usr/share/themes/oxygen-gtk/gtk-3.0" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-pipe -O2 -march=bdver3" DISTDIR="/var/cache/portage/distfiles" EMERGE_DEFAULT_OPTS="--keep-going --nospinner" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs buildsyspkg compressdebug config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch parallel-install preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://ftp.spline.inf.fu-berlin.de/mirrors/gentoo/ http://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ http://distfiles.gentoo.org" LANG="en_GB.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu" MAKEOPTS="-j5" PKGDIR="/var/cache/portage/packages" PORTAGE_COMPRESS="xz" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" USE="X a52 aac aacplus aacs acl acpi alsa amd64 appindicator audit avahi bash-completion bdplus berkdb bluetooth bluray branding bzip2 cairo caps cdda cddb cdio cdr celt cjk cli conntrack cracklib crypt cups cxx dbus declarative dirac dri dts dvb dvd dvdr egl emboss encode exif fam fax ffmpeg firefox flac fontconfig fortran gdbm gif glamor gles gles2 gmp gpm gstreamer gtk ibus iconv ipv6 jpeg jpeg2k kde kipi ladspa latex lcms ldap libinput libnotify libproxy libsecret lua_target_lua5-2 lv2 lz4 lzma lzo mad mmx mmxext mng modemmanager modplug modules mp3 mp4 mpeg mplayer mtp multilib multitarget mysql ncurses netlink networkmanager nls nptl ogg openal opencl openexr opengl openmax openmp opus pam pango pch pcre pdf phonon plasma png policykit ppds pulseaudio qml qt3support qt4 qt5 readline rtmp samba scanner schroedinger sctp sdl seccomp semantic-desktop session speex spell sse sse2 ssl startup-notification subversion svg systemd tcpd theora threads tiff truetype udev udisks unicode upnp upnp-av upower usb v4l vaapi vdpau vorbis vpx wavpack wayland webp widgets x264 x265 xattr xcb xcomposite xinerama xml xrandr xscreensaver xv xvid xz zeroconf zlib" ABI_X86="64" ALSA_CARDS="hda-intel" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="stage words flow sheets gemini" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="3dnow 3dnowext mmx mmxext sse sse2 sse3" DRACUT_MODULES="btrfs caps systemd" ELIBC="glibc" ENLIGHTENMENT_MODULES="*" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="coreboot efi-64 pc" INPUT_DEVICES="evdev joystick" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de en en_GB ar fa" LIRC_DEVICES="devinput" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="amdgpu radeon radeonsi" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON ================================================================= Package Settings ================================================================= sci-libs/blas-reference-20131116-r1::science was built with the following: USE="-int64 -static-libs -test" ABI_X86="64 -32 -x32" sci-libs/lapack-reference-3.2.1-r1::gentoo was built with the following: USE="(policykit) -doc" ABI_X86="64" sci-libs/gsl-1.16-r2::science was built with the following: USE="-cblas-external -static-libs" ABI_X86="64 -32 -x32"
Created attachment 415788 [details] build.log
$ eix -e eselect [I] app-admin/eselect Available versions: 1.3.8 1.4.4 (~)1.4.5 (~)1.4.5-r101[1] **9999 **9999[1] {doc emacs vim-syntax} Installed versions: 1.4.5-r101[1](01:35:16 17/10/15)(-doc -emacs -vim-syntax) Homepage: http://wiki.gentoo.org/wiki/Project:Eselect Description: Gentoo's multi-purpose configuration and management tool [1] "science" /var/lib/layman/science
PLease only use ABI_X96="64" not 32.
(In reply to Justin Lecher from comment #3) > PLease only use ABI_X96="64" not 32. build.log says I did not...? (Check line 4.)
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5f8a985b71b033d7a7c4d252c00dd83669ee5913 commit 5f8a985b71b033d7a7c4d252c00dd83669ee5913 Author: Mo Zhou <cdluminate@gmail.com> AuthorDate: 2019-06-26 02:27:40 +0000 Commit: Benda Xu <heroxbd@gentoo.org> CommitDate: 2019-06-26 06:06:09 +0000 virtual/{blas,cblas,lapack,lapacke}: add/update virtual packages. These virtual packages are used by the BLAS/LAPACK runtime switching mechanism. Drop old EAPI=5 ebuilds. Closes: https://github.com/gentoo/gentoo/pull/12323 Closes: https://bugs.gentoo.org/373613 Closes: https://bugs.gentoo.org/669644 Closes: https://bugs.gentoo.org/564546 Closes: https://bugs.gentoo.org/565776 Closes: https://bugs.gentoo.org/646316 Closes: https://bugs.gentoo.org/563674 Closes: https://bugs.gentoo.org/659014 Closes: https://bugs.gentoo.org/659264 Closes: https://bugs.gentoo.org/657984 Closes: https://bugs.gentoo.org/381801 Closes: https://bugs.gentoo.org/646316 Closes: https://bugs.gentoo.org/565776 Closes: https://bugs.gentoo.org/498490 Signed-off-by: Mo Zhou <cdluminate@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org> virtual/blas/blas-1.0.ebuild | 14 -------------- virtual/blas/blas-3.8.ebuild | 14 ++++++++++++++ virtual/blas/metadata.xml | 10 +++++++--- virtual/cblas/cblas-1.0.ebuild | 14 -------------- virtual/cblas/cblas-3.8.ebuild | 14 ++++++++++++++ virtual/cblas/metadata.xml | 10 +++++++--- virtual/lapack/lapack-3.0.ebuild | 13 ------------- virtual/lapack/lapack-3.1.ebuild | 13 ------------- virtual/lapack/lapack-3.8.ebuild | 14 ++++++++++++++ virtual/lapack/metadata.xml | 10 +++++++--- virtual/lapacke/lapacke-3.8.ebuild | 14 ++++++++++++++ virtual/lapacke/metadata.xml | 16 ++++++++++++++++ 12 files changed, 93 insertions(+), 63 deletions(-)
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0721aba4db4bc8ce37d11eab06ff528f31e4ce9f commit 0721aba4db4bc8ce37d11eab06ff528f31e4ce9f Author: Benda Xu <heroxbd@gentoo.org> AuthorDate: 2019-06-27 05:41:31 +0000 Commit: Benda Xu <heroxbd@gentoo.org> CommitDate: 2019-07-03 12:30:39 +0000 virtual/{blas,cblas,lapack,lapacke}: add virtual packages. These virtual packages are used by the BLAS/LAPACK runtime switching mechanism. Closes: https://github.com/gentoo/gentoo/pull/12323 Closes: https://bugs.gentoo.org/373613 Closes: https://bugs.gentoo.org/381801 Closes: https://bugs.gentoo.org/498490 Closes: https://bugs.gentoo.org/563674 Closes: https://bugs.gentoo.org/564546 Closes: https://bugs.gentoo.org/565776 Closes: https://bugs.gentoo.org/646316 Closes: https://bugs.gentoo.org/657984 Closes: https://bugs.gentoo.org/659014 Closes: https://bugs.gentoo.org/659264 Closes: https://bugs.gentoo.org/669644 Signed-off-by: Mo Zhou <cdluminate@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org> virtual/blas/blas-3.8.ebuild | 14 ++++++++++++++ virtual/blas/metadata.xml | 10 +++++++--- virtual/cblas/cblas-3.8.ebuild | 14 ++++++++++++++ virtual/cblas/metadata.xml | 10 +++++++--- virtual/lapack/lapack-3.8.ebuild | 14 ++++++++++++++ virtual/lapack/metadata.xml | 10 +++++++--- virtual/lapacke/lapacke-3.8.ebuild | 14 ++++++++++++++ virtual/lapacke/metadata.xml | 16 ++++++++++++++++ 8 files changed, 93 insertions(+), 9 deletions(-)
