Created attachment 266735 [details] Build log Portage 2.1.9.44 (default/linux/x86/10.0, gcc-4.5.2-asneeded, glibc-2.13-r2, 2.6.38 i686) ================================================================= System uname: Linux-2.6.38-i686-Quad-Core_AMD_Opteron-tm-_Processor_2350-with-gentoo-2.0.1 Timestamp of tree: Mon, 21 Mar 2011 12:00:01 +0000 ccache version 3.1.4 [disabled] app-shells/bash: 4.2_p8 dev-java/java-config: 2.1.11-r3 dev-lang/python: 2.4.6, 2.7.1-r1, 3.1.3-r1 dev-util/ccache: 3.1.4 dev-util/cmake: 2.8.4 sys-apps/baselayout: 2.0.1-r1 sys-apps/openrc: 0.7.0 sys-apps/sandbox: 2.5 sys-devel/autoconf: 2.13, 2.68 sys-devel/automake: 1.9.6-r3, 1.10.3, 1.11.1 sys-devel/binutils: 2.21 sys-devel/gcc: 4.5.2 sys-devel/gcc-config: 1.4.1 sys-devel/libtool: 2.4-r1 sys-devel/make: 3.82 virtual/os-headers: 2.6.38 (sys-kernel/linux-headers) ACCEPT_KEYWORDS="x86 ~x86" ACCEPT_LICENSE="*" CBUILD="i686-pc-linux-gnu" CFLAGS="-O2 -pipe" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /opt/openjms/config /usr/lib/tomoyo/conf /usr/share/bufrtables /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/maven-bin-3.0/conf /usr/share/openvpn/easy-rsa /usr/share/qpsmtpd/plugins /usr/share/themes/oxygen-gtk/gtk-2.0 /var/bind /var/lib/hsqldb /var/lib/redmine/config /var/phxd /var/qmail/alias /var/qmail/control /var/vpopmail/etc /var/yp/Makefile" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/eselect/postgresql /etc/fonts/fonts.conf /etc/games/angband/edit/ /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /var/lib/redmine/config/locales /var/lib/redmine/config/settings.yml" CXXFLAGS="-O2 -pipe" DISTDIR="/var/cache/portage/distfiles" FEATURES="assume-digests binpkg-logs distlocks fixlafiles fixpackages news parallel-fetch protect-owned sandbox sfperms split-log strict test test-fail-continue unknown-features-warn unmerge-orphans userfetch userpriv usersandbox" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://gentoo.wheel.sk/" LANG="en_US.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu" MAKEOPTS="-j14" PKGDIR="/var/spool/portage/packages" PORTAGE_COMPRESS="" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/var/cache/portage/tree" PORTDIR_OVERLAY="" SYNC="rsync://yamato.home.flameeyes.eu/gentoo-portage" USE="acl berkdb bzip2 cli cracklib crypt cups cxx dri fortran gdbm gpm iconv ipv6 java5 java6 modules mudflap mysql ncurses nls nostatic nptl nptlonly openmp pam pcre pcsc-lite perl postgres pppd python qt3support readline ruby session ssl sysfs tcpd unicode vhosts x86 xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias auth_digest cgi" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" PHP_TARGETS="php5-3" RUBY_TARGETS="ruby18 jruby ruby19 ree18" USERLAND="GNU" VIDEO_CARDS="intel radeon nouveau vmware" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Hi Diego, could you retry the test and see whether it fails again? I might, that the algorithm doesn't converge on certain circumstances.
I also bumped into this bug while stabilizing a new pymol. I was building sci-chemistry/apbs-1.2.1b-r4. TESTRESULTS.log shows 2 failed tests, don't know if this is related to the same problem that Diego reports (the warnings on the convergence).
Created attachment 274527 [details] build.log Also failed here. emerge --info: Portage 2.1.9.42 (default/linux/x86/10.0/developer, gcc-4.4.5, libc-0-r0, 2.6.37-gentoo-r4 i686) ================================================================= System uname: Linux-2.6.37-gentoo-r4-i686-Intel-R-_Core-TM-2_Duo_CPU_P8700_@_2.53GHz-with-gentoo-2.0.2 Timestamp of tree: Tue, 24 May 2011 09:30:01 +0000 app-shells/bash: 4.1_p9 dev-java/java-config: 2.1.11-r3 dev-lang/python: 2.7.1-r1, 3.1.3-r1 dev-util/cmake: 2.8.4-r1 sys-apps/baselayout: 2.0.2 sys-apps/openrc: 0.8.2-r1 sys-apps/sandbox: 2.4 sys-devel/autoconf: 2.13, 2.65-r1 sys-devel/automake: 1.9.6-r3, 1.10.3, 1.11.1 sys-devel/binutils: 2.20.1-r1 sys-devel/gcc: 4.4.5 sys-devel/gcc-config: 1.4.1-r1 sys-devel/libtool: 2.2.10 sys-devel/make: 3.81-r2 sys-kernel/linux-headers: 2.6.36.1 sys-libs/glibc: 2.12.2 virtual/os-headers: 0 ACCEPT_KEYWORDS="x86" ACCEPT_LICENSE="*" CBUILD="i686-pc-linux-gnu" CFLAGS="-O2 -march=i686 -pipe" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.3/ext-active/ /etc/php/cgi-php5.3/ext-active/ /etc/php/cli-php5.3/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-O2 -march=i686 -pipe" DISTDIR="/usr/portage/distfiles" FEATURES="assume-digests binpkg-logs collision-protect distlocks fixlafiles fixpackages multilib-strict news parallel-fetch protect-owned sandbox sfperms sign splitdebug strict test test-fail-continue unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox" FFLAGS="" GENTOO_MIRRORS="http://distfiles.gentoo.org" LDFLAGS="-Wl,--hash-style=gnu -Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j3" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/local/portage" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="X a52 aac acl acpi alsa berkdb bzip2 cairo cdr cli consolekit cracklib crypt cups cxx dbus device-mapper dri dts dvd dvdr emacs emboss encode exif fam firefox flac fortran gdbm gdu gif gnutls gtk iconv icu jpeg lcms libnotify mad mbox mng modules mp3 mp4 mpeg mudflap ncurses nls nptl nptlonly nss ogg opengl openmp pam pango pcre pdf perl png policykit ppds pppd python qt3support readline sdl secure-delete session snmp spell sqlite ssl startup-notification subversion svg sysfs tcb tcpd threads tiff toolkit-scroll-bars truetype udev unicode usb vorbis x264 x86 xcb xft xinerama xml xorg xulrunner xv xvid zlib" ALSA_CARDS="ens1371" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="braindump flow karbon kexi kpresenter krita tables words" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev keyboard vmmouse" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" PHP_TARGETS="php5-3" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="vmware vesa vga" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, LINGUAS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Heh, got this again while arch testing.
(In reply to comment #4) > Heh, got this again while arch testing. I don't now where to fix what. Only solution is to disable test. What the test suite does is comparing results of calculations and finds an error of 0.001212142%. This might come from rounding or so. I don't know.
Created attachment 562866 [details] build.log (1.4.1-r2, ppc)
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=3831172264494f42d621e760593f4d066900d922 commit 3831172264494f42d621e760593f4d066900d922 Author: Aaron Bauman <bman@gentoo.org> AuthorDate: 2020-07-28 18:45:29 +0000 Commit: Aaron Bauman <bman@gentoo.org> CommitDate: 2020-07-28 18:45:29 +0000 */*: Drop more Py2 last-rited pkgs Bug: https://bugs.gentoo.org/715966 Closes: https://bugs.gentoo.org/714628 Closes: https://bugs.gentoo.org/606680 Closes: https://bugs.gentoo.org/686238 Closes: https://bugs.gentoo.org/710214 Closes: https://bugs.gentoo.org/710028 Closes: https://bugs.gentoo.org/710032 Closes: https://bugs.gentoo.org/656934 Closes: https://bugs.gentoo.org/592718 Closes: https://bugs.gentoo.org/446122 Closes: https://bugs.gentoo.org/547210 Closes: https://bugs.gentoo.org/359785 Closes: https://bugs.gentoo.org/571396 Closes: https://bugs.gentoo.org/600754 Closes: https://bugs.gentoo.org/677830 Closes: https://bugs.gentoo.org/710716 Closes: https://bugs.gentoo.org/651940 Closes: https://bugs.gentoo.org/695132 Closes: https://bugs.gentoo.org/708978 Closes: https://bugs.gentoo.org/710058 Signed-off-by: Aaron Bauman <bman@gentoo.org> app-backup/holland-backup-example/Manifest | 1 - .../holland-backup-example-1.0.10.ebuild | 39 ----- app-backup/holland-backup-example/metadata.xml | 5 - app-backup/holland-backup-pgdump/Manifest | 1 - .../holland-backup-pgdump-1.0.10.ebuild | 38 ----- app-backup/holland-backup-pgdump/metadata.xml | 5 - app-backup/holland-backup-random/Manifest | 1 - .../holland-backup-random-1.0.10.ebuild | 39 ----- app-backup/holland-backup-random/metadata.xml | 5 - app-backup/holland-backup-sqlite/Manifest | 1 - .../holland-backup-sqlite-1.0.10.ebuild | 39 ----- app-backup/holland-backup-sqlite/metadata.xml | 5 - app-backup/holland-lib-common/Manifest | 1 - .../holland-lib-common-1.0.10.ebuild | 25 ---- app-backup/holland-lib-common/metadata.xml | 5 - app-backup/holland-lib-lvm/Manifest | 1 - .../holland-lib-lvm/holland-lib-lvm-1.0.10.ebuild | 25 ---- app-backup/holland-lib-lvm/metadata.xml | 5 - app-backup/holland/Manifest | 1 - app-backup/holland/holland-1.0.10.ebuild | 54 ------- app-backup/holland/metadata.xml | 5 - app-cdr/burn-cd/Manifest | 2 - app-cdr/burn-cd/burn-cd-1.8.0-r1.ebuild | 31 ---- app-cdr/burn-cd/burn-cd-1.8.1.ebuild | 27 ---- app-cdr/burn-cd/metadata.xml | 16 --- app-dicts/opendict/Manifest | 1 - app-dicts/opendict/metadata.xml | 11 -- app-dicts/opendict/opendict-0.6.7-r1.ebuild | 91 ------------ app-editors/editra/Manifest | 1 - app-editors/editra/editra-0.7.20-r2.ebuild | 54 ------- app-editors/editra/files/editra-0.7.20-wx30.patch | 44 ------ app-editors/editra/metadata.xml | 8 -- app-editors/leo/Manifest | 1 - app-editors/leo/leo-5.6.ebuild | 36 ----- app-editors/leo/metadata.xml | 9 -- app-emulation/playonlinux/Manifest | 2 - .../files/playonlinux-4.2.4-binary-plugin.patch | 17 --- .../files/playonlinux-4.2.4-pol-bash.patch | 35 ----- .../playonlinux-4.2.6-stop-update-warning.patch | 17 --- app-emulation/playonlinux/files/playonlinux-pkg.1 | 33 ----- app-emulation/playonlinux/files/playonlinux.1 | 33 ----- app-emulation/playonlinux/metadata.xml | 15 -- .../playonlinux/playonlinux-4.2.12.ebuild | 118 --------------- .../playonlinux/playonlinux-4.3.4-r1.ebuild | 108 -------------- app-office/taskcoach/Manifest | 1 - .../files/taskcoach-1.4.3-version-check.patch | 25 ---- app-office/taskcoach/metadata.xml | 21 --- app-office/taskcoach/taskcoach-1.4.6.ebuild | 41 ------ app-text/bibus/Manifest | 2 - app-text/bibus/bibus-1.5.2-r3.ebuild | 86 ----------- app-text/bibus/files/bibus-1.5.2-bibus.cfg.patch | 31 ---- app-text/bibus/files/bibus-1.5.2-install.patch | 110 -------------- app-text/bibus/files/bibus-1.5.2-wx30.patch | 158 --------------------- app-text/bibus/metadata.xml | 11 -- dev-db/SchemaSync/Manifest | 3 - dev-db/SchemaSync/SchemaSync-0.9.2-r1.ebuild | 24 ---- dev-db/SchemaSync/SchemaSync-0.9.4.ebuild | 23 --- dev-db/SchemaSync/SchemaSync-0.9.5.ebuild | 23 --- dev-db/SchemaSync/metadata.xml | 12 -- dev-python/squaremap/Manifest | 1 - dev-python/squaremap/metadata.xml | 15 -- dev-python/squaremap/squaremap-1.0.4.ebuild | 26 ---- dev-util/wxglade/Manifest | 1 - .../wxglade/files/wxglade-0.6.3-wxversion.patch | 12 -- dev-util/wxglade/metadata.xml | 11 -- dev-util/wxglade/wxglade-0.8.2-r1.ebuild | 55 ------- media-gfx/fontypython/Manifest | 1 - .../0001-Do-not-crash-on-empty-pogs-list.patch | 21 --- ...nused-code-which-causes-crash-with-wx-3.0.patch | 134 ----------------- ...python-3.0-which-enforces-assertions-on-L.patch | 28 ---- .../fontypython/files/fontypython-pillow.patch | 41 ------ media-gfx/fontypython/fontypython-0.4.4-r3.ebuild | 38 ----- media-gfx/fontypython/metadata.xml | 8 -- media-gfx/fr0st/Manifest | 1 - media-gfx/fr0st/files/fr0st-1.4-colour.patch | 9 -- media-gfx/fr0st/fr0st-1.4-r2.ebuild | 57 -------- media-gfx/fr0st/metadata.xml | 8 -- profiles/package.mask | 38 ----- sci-chemistry/apbs/Manifest | 1 - sci-chemistry/apbs/apbs-1.4.1-r2.ebuild | 129 ----------------- sci-chemistry/apbs/files/apbs-1.4.1-manip.patch | 50 ------- sci-chemistry/apbs/files/apbs-1.4.1-multilib.patch | 92 ------------ sci-chemistry/apbs/files/apbs-1.4.1-python.patch | 122 ---------------- sci-chemistry/apbs/metadata.xml | 25 ---- sci-chemistry/eden/Manifest | 1 - sci-chemistry/eden/eden-5.3-r2.ebuild | 88 ------------ sci-chemistry/eden/files/5.3-makefile-fixes.patch | 60 -------- .../eden/files/eden-5.3-format-security.patch | 96 ------------- sci-chemistry/eden/files/eden-5.3-impl-dec.patch | 28 ---- sci-chemistry/eden/files/makefile-fixes.patch | 25 ---- sci-chemistry/eden/metadata.xml | 12 -- sci-chemistry/p3d/Manifest | 1 - sci-chemistry/p3d/metadata.xml | 21 --- sci-chemistry/p3d/p3d-0.4.3-r1.ebuild | 29 ---- sci-chemistry/p3d/p3d-9999.ebuild | 27 ---- sci-chemistry/pdb-tools/Manifest | 1 - sci-chemistry/pdb-tools/metadata.xml | 12 -- sci-chemistry/pdb-tools/pdb-tools-0.2.1-r1.ebuild | 79 ----------- sci-chemistry/pdb-tools/pdb-tools-0.2.1-r2.ebuild | 83 ----------- sci-chemistry/pdb2pqr/Manifest | 1 - sci-chemistry/pdb2pqr/files/pdb2pka | 13 -- sci-chemistry/pdb2pqr/files/pdb2pqr | 13 -- .../pdb2pqr/files/pdb2pqr-1.9.0-flags.patch | 45 ------ .../pdb2pqr/files/pdb2pqr-1.9.0-install-py.patch | 15 -- sci-chemistry/pdb2pqr/metadata.xml | 15 -- sci-chemistry/pdb2pqr/pdb2pqr-1.9.0-r3.ebuild | 114 --------------- sci-chemistry/prodecomp/Manifest | 1 - sci-chemistry/prodecomp/metadata.xml | 18 --- sci-chemistry/prodecomp/prodecomp-3.0-r3.ebuild | 53 ------- sci-chemistry/pymol-plugins-caver/Manifest | 1 - sci-chemistry/pymol-plugins-caver/metadata.xml | 8 -- .../pymol-plugins-caver-2.1.2.ebuild | 56 -------- sci-chemistry/pymol-plugins-dssp/Manifest | 1 - sci-chemistry/pymol-plugins-dssp/metadata.xml | 8 -- .../pymol-plugins-dssp-110430-r1.ebuild | 39 ----- sci-chemistry/pymol-plugins-promol/Manifest | 1 - sci-chemistry/pymol-plugins-promol/metadata.xml | 8 -- .../pymol-plugins-promol-3.0.2-r1.ebuild | 60 -------- sci-chemistry/sparky/Manifest | 1 - sci-chemistry/sparky/files/3.115-fix-c++14.patch | 32 ----- sci-chemistry/sparky/files/3.115-ldflags.patch | 61 -------- sci-chemistry/sparky/files/3.115-makefile.patch | 17 --- sci-chemistry/sparky/files/3.115-paths.patch | 13 -- sci-chemistry/sparky/files/3.115-wrapper-r1.patch | 41 ------ sci-chemistry/sparky/metadata.xml | 8 -- sci-chemistry/sparky/sparky-3.115-r2.ebuild | 117 --------------- www-apps/viewvc/Manifest | 1 - www-apps/viewvc/metadata.xml | 13 -- www-apps/viewvc/viewvc-1.1.26-r1.ebuild | 115 --------------- 129 files changed, 3958 deletions(-)
