Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 934491 - dev-db/percona-xtrabackup-8.0.30.23 with sys-process/procps-4.0.4-r1 storage/innobase/xtrabackup/src/utils.cc:26:10: fatal error: proc/sysinfo.h: No such file or directory
Summary: dev-db/percona-xtrabackup-8.0.30.23 with sys-process/procps-4.0.4-r1 storage/...
Status: RESOLVED DUPLICATE of bug 913649
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: No maintainer - Look at https://wiki.gentoo.org/wiki/Project:Proxy_Maintainers if you want to take care of it
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2024-06-18 06:48 UTC by Victor Costache
Modified: 2024-08-07 21:59 UTC (History)
4 users (show)

See Also:
Package list:
Runtime testing required: ---

Attachments
build log (build.zip,66.43 KB, application/x-zip-compressed)
2024-06-18 06:50 UTC, Victor Costache 		Details
View All Add an attachment (proposed patch, testcase, etc.)

Note You need to log in before you can comment on or make changes to this bug.
Description Victor Costache 2024-06-18 06:48:47 UTC 
Upgrading to sys-process/procps-4.0.4-r1 required to rebuild dev-db/percona-server-8.0.26.16-r2

After emerging successful I got:

!!! existing preserved libs:
>>> package: sys-process/procps-4.0.4-r1
 *  - /usr/lib64/libprocps.so.8
 *  - /usr/lib64/libprocps.so.8.0.3
 *      used by /usr/bin/xtrabackup (dev-db/percona-xtrabackup-8.0.30.23)
Use emerge @preserved-rebuild to rebuild packages using these libraries

The above emerge fails.

emerge --info '=dev-db/percona-xtrabackup-8.0.30.23::gentoo'
Portage 3.0.63 (python 3.12.3-final-0, default/linux/amd64/17.1/systemd/merged-usr, gcc-13, glibc-2.39-r6, 6.1.90-gentoo-x86_64 x86_64)
=================================================================
                         System Settings
=================================================================
System uname: Linux-6.1.90-gentoo-x86_64-x86_64-AMD_Ryzen_9_3900X_12-Core_Processor-with-glibc2.39
KiB Mem:   131847588 total,  21467424 free
KiB Swap:    8388604 total,   8386812 free
Timestamp of repository gentoo: Tue, 18 Jun 2024 06:00:00 +0000
Head commit of repository gentoo: a4c5095b6aceb64e568c82544f17c453a9605c6c
sh bash 5.1_p16-r11
ld GNU ld (Gentoo 2.42 p3) 2.42.0
app-misc/pax-utils:        1.3.7::gentoo
app-shells/bash:           5.1_p16-r11::gentoo
dev-build/autoconf:        2.71-r7::gentoo
dev-build/automake:        1.16.5-r2::gentoo
dev-build/cmake:           3.28.5::gentoo
dev-build/libtool:         2.4.7-r4::gentoo
dev-build/make:            4.4.1-r1::gentoo
dev-build/meson:           1.4.0-r1::gentoo
dev-java/java-config:      2.3.3-r1::gentoo
dev-lang/perl:             5.38.2-r3::gentoo
dev-lang/python:           3.11.9-r1::gentoo, 3.12.3-r1::gentoo
dev-lang/rust-bin:         1.77.1::gentoo
sys-apps/baselayout:       2.15::gentoo
sys-apps/sandbox:          2.38::gentoo
sys-apps/systemd:          255.7::gentoo
sys-devel/binutils:        2.42-r1::gentoo
sys-devel/binutils-config: 5.5::gentoo
sys-devel/gcc:             13.2.1_p20240210::gentoo
sys-devel/gcc-config:      2.11::gentoo
sys-kernel/linux-headers:  6.1::gentoo (virtual/os-headers)
sys-libs/glibc:            2.39-r6::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    volatile: False
    sync-rsync-verify-metamanifest: yes
    sync-rsync-verify-jobs: 1
    sync-rsync-verify-max-age: 24
    sync-rsync-extra-opts: 

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="@FREE"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=znver2 -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php8.1/ext-active/ /etc/php/cgi-php8.1/ext-active/ /etc/php/cli-php8.1/ext-active/ /etc/php/fpm-php8.1/ext-active/ /etc/php/phpdbg-php8.1/ext-active/ /etc/revdep-rebuild /etc/sandbox.d"
CXXFLAGS="-march=znver2 -O2 -pipe"
DISTDIR="/var/cache/distfiles"
EMERGE_DEFAULT_OPTS="--with-bdeps y"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GDK_PIXBUF_MODULE_FILE GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME"
FCFLAGS="-march=znver2 -O2 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg-live config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync merge-wait multilib-strict network-sandbox news parallel-fetch pid-sandbox pkgdir-index-trusted preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-march=znver2 -O2 -pipe"
GENTOO_MIRRORS="http://ftp.romnet.org/gentoo/"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LEX="flex"
MAKEOPTS="-j25"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
SHELL="/bin/bash"
USE="acl amd64 apache2 bzip2 cli crypt dri fortran gdbm iconv ipv6 libtirpc multilib mysql ncurses nls openmp pam pcre readline seccomp snmp sqlite ssl systemd test-rust threads udev unicode xattr zlib" ABI_X86="64" ADA_TARGET="gcc_12" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_anon authn_dbm authn_file authz_dbm authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir env expires ext_filter file_cache filter headers include info log_config logio mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2 aes avx avx2 f16c fma3 pclmul popcnt sha sse3 sse4_1 sse4_2 sse4a ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 ntrip navcom oceanserver oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 tsip tripmate tnt ublox" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz glk hd44780 lb216 lcdm001 mtxorb text" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php8-2" POSTGRES_TARGETS="postgres15" PYTHON_SINGLE_TARGET="python3_12" PYTHON_TARGETS="python3_12" RUBY_TARGETS="ruby31 ruby32" VIDEO_CARDS="amdgpu fbdev intel nouveau radeon radeonsi vesa dummy" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipp2p iface geoip fuzzy condition tarpit sysrq proto logmark ipmark dhcpmac delude chaos account"
Unset:  ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LC_ALL, LD, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PYTHONPATH, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS

=================================================================
                        Package Settings
=================================================================

dev-db/percona-xtrabackup-8.0.30.23::gentoo was built with the following:
USE="" ABI_X86="(64)
Comment 1 Victor Costache 2024-06-18 06:50:53 UTC 
Created attachment 895997 [details]
build log
Comment 2 Vladimir Varlamov 2024-07-03 08:02:33 UTC 
duplicate of #913649
Comment 3 Eli Schwartz gentoo-dev 2024-08-07 21:59:21 UTC 

*** This bug has been marked as a duplicate of bug 913649 ***