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Bug 922338 - sci-libs/gdal-3.7.0 with -jpeg fails to build with undefined reference to `GDAL_MRF::CHUNK_NAME_SIZE'
Summary: sci-libs/gdal-3.7.0 with -jpeg fails to build with undefined reference to `GD...
Status: RESOLVED DUPLICATE of bug 914176
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: AMD64 Linux
: Normal normal
Assignee: Gentoo Linux bug wranglers
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2024-01-18 01:36 UTC by sklv_gentoo
Modified: 2024-01-18 01:42 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


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Description sklv_gentoo 2024-01-18 01:36:33 UTC
When trying to build the latest stable version of sci-libs/gdal it repeatably fails to build with multiple undefined references during linking:

JPEG12_band.cpp:(.text+0x2b7): undefined reference to `GDAL_MRF::CHUNK_NAME_SIZE'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0x2c6): undefined reference to `GDAL_MRF::CHUNK_NAME'
JPEG12_band.cpp:(.text+0x54a): undefined reference to `jpeg_std_error'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0x58e): undefined reference to `jpeg_CreateCompress'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0x5f7): undefined reference to `jpeg_set_defaults'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0x607): undefined reference to `jpeg_set_quality'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0x764): undefined reference to `GDAL_MRF::CHUNK_NAME'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0x78a): undefined reference to `GDAL_MRF::CHUNK_NAME_SIZE'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0x8c7): undefined reference to `GDAL_MRF::CHUNK_NAME_SIZE'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0x8ce): undefined reference to `GDAL_MRF::CHUNK_NAME'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0x950): undefined reference to `GDAL_MRF::CHUNK_NAME_SIZE'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0x99e): undefined reference to `GDAL_MRF::CHUNK_NAME_SIZE'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0x9e1): undefined reference to `jpeg_destroy_compress'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0xacb): undefined reference to `jpeg_destroy_compress'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0xc00): undefined reference to `jpeg_set_colorspace'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0xc19): undefined reference to `jpeg_start_compress'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0xc3a): undefined reference to `jpeg_write_marker'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0xc53): undefined reference to `jpeg12_write_scanlines'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0xc60): undefined reference to `jpeg_finish_compress'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0xc6d): undefined reference to `jpeg_destroy_compress'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0xcbb): undefined reference to `jpeg_destroy_compress'
JPEG12_band.cpp:(.text+0xe2c): undefined reference to `jpeg_std_error'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0xe9e): undefined reference to `jpeg_resync_to_restart'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0xedd): undefined reference to `jpeg_CreateDecompress'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0xf19): undefined reference to `jpeg_destroy_decompress'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0xf85): undefined reference to `jpeg_set_marker_processor'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0xf97): undefined reference to `jpeg_read_header'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0xfa4): undefined reference to `jpeg_has_multiple_scans'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0x10e5): undefined reference to `jpeg_start_decompress'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0x1145): undefined reference to `jpeg12_read_scanlines'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0x116a): undefined reference to `jpeg_finish_decompress'
/usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: JPEG12_band.cpp:(.text+0x1177): undefined reference to `jpeg_destroy_decompress'

Reproducible: Always

Steps to Reproduce:
1. USE="-jpeg" emerge gdal
Actual Results:  
The build fails

Expected Results:  
The package is successfully build.

Portage 3.0.61 (python 3.11.7-final-0, default/linux/amd64/17.1/no-multilib/hardened/selinux, gcc-13, glibc-2.38-r9, 6.1.46-gentoo x86_64)
=================================================================
System uname: Linux-6.1.46-gentoo-x86_64-AMD_Ryzen_7_5800X3D_8-Core_Processor-with-glibc2.38
KiB Mem:     9955072 total,   4676068 free
KiB Swap:          0 total,         0 free
Timestamp of repository gentoo: Wed, 17 Jan 2024 15:30:01 +0000

sh bash 5.1_p16-r6
ld GNU ld (Gentoo 2.41 p4) 2.41.0
app-misc/pax-utils:        1.3.5::gentoo
app-shells/bash:           5.1_p16-r6::gentoo
dev-build/autoconf:        2.13-r7::gentoo, 2.71-r6::gentoo
dev-build/automake:        1.16.5-r1::gentoo
dev-build/cmake:           3.27.9::gentoo
dev-build/libtool:         2.4.7-r1::gentoo
dev-build/make:            4.4.1-r1::gentoo
dev-build/meson:           1.3.0-r2::gentoo
dev-java/java-config:      2.3.3-r1::gentoo
dev-lang/perl:             5.38.2-r1::gentoo
dev-lang/python:           3.11.7::gentoo, 3.12.1_p1::gentoo
dev-lang/rust:             1.74.1::gentoo
sec-policy/selinux-base:   2.20231002-r2::gentoo
sys-apps/baselayout:       2.14-r1::gentoo
sys-apps/openrc:           0.48::gentoo
sys-apps/sandbox:          2.38::gentoo
sys-devel/binutils:        2.41-r3::gentoo
sys-devel/binutils-config: 5.5::gentoo
sys-devel/clang:           15.0.7-r3::gentoo, 17.0.6::gentoo
sys-devel/gcc:             13.2.1_p20230826::gentoo
sys-devel/gcc-config:      2.11::gentoo
sys-devel/lld:             17.0.6::gentoo
sys-devel/llvm:            15.0.7-r3::gentoo, 17.0.6::gentoo
sys-kernel/linux-headers:  6.1::gentoo (virtual/os-headers)
sys-libs/glibc:            2.38-r9::gentoo
sys-libs/libselinux:       3.5-r1::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    volatile: False
    sync-rsync-verify-max-age: 24
    sync-rsync-verify-metamanifest: yes
    sync-rsync-extra-opts:
    sync-rsync-verify-jobs: 1

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="@FREE"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/var/cache/distfiles"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GDK_PIXBUF_MODULE_FILE GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME"
FCFLAGS="-march=native -O2 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs buildpkg-live config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pkgdir-index-trusted preserve-libs protect-owned qa-unresolved-soname-deps sandbox selinux sesandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-march=native -O2 -pipe"
GENTOO_MIRRORS="https://ftp-stud.hs-esslingen.de/pub/Mirrors/gentoo/ https://mirror.leaseweb.com/gentoo/ https://ftp.snt.utwente.nl/pub/os/linux/gentoo https://mirror.bytemark.co.uk/gentoo/ https://mirrors.evowise.com/gentoo/"
LANG="en_GB.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LEX="flex"
MAKEOPTS="-j8"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
SHELL="/bin/bash"
USE="acl amd64 audit bzip2 caps cet cli consolekit crypt dri elogind evdev fortran gdbm hardened iconv libglvnd libtirpc lto lvm ncurses nls open_perms openmp pam pcre peer_perms pic pie pulseaudio readline seccomp selinux split-usr ssl ssp test-rust threads ubac unconfined unicode vaapi verify-sig vulkan wayland xattr xtpax zlib" ABI_X86="64" ADA_TARGET="gnat_2021" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_anon authn_dbm authn_file authz_dbm authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir env expires ext_filter file_cache filter headers include info log_config logio mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 ntrip navcom oceanserver oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 tsip tripmate tnt ublox" GRUB_PLATFORMS="efi-64" INPUT_DEVICES="evdev" KERNEL="linux" L10N="en-GB" LCD_DEVICES="bayrad cfontz glk hd44780 lb216 lcdm001 mtxorb text" LLVM_TARGETS="WebAssembly" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php8-1" POSTGRES_TARGETS="postgres15" PYTHON_SINGLE_TARGET="python3_11" PYTHON_TARGETS="python3_11" RUBY_TARGETS="ruby31" VIDEO_CARDS="amdgpu radeonsi" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipp2p iface geoip fuzzy condition tarpit sysrq proto logmark ipmark dhcpmac delude chaos account"
Unset:  ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EMERGE_DEFAULT_OPTS, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, INSTALL_MASK, LC_ALL, LD, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PYTHONPATH, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS
Comment 1 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2024-01-18 01:41:26 UTC

*** This bug has been marked as a duplicate of bug 914176 ***
Comment 2 Sam James archtester Gentoo Infrastructure gentoo-dev Security 2024-01-18 01:42:28 UTC
I've kicked bug 917540 now.