WARNING Overriding pythran description with argspec information for: numpy.random.uniform WARNING Overriding pythran description with argspec information for: numpy.random.weibull warning: mdtraj/formats/dcd/dcdlib.pxd:12:12: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: mdtraj/formats/dcd/dcdlib.pxd:12:16: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: mdtraj/formats/dcd/dcdlib.pxd:12:20: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. Error compiling Cython file: ------------------------------------------------------------ ... ------------------------------------------------------------------- This is an unstable amd64 chroot image at a tinderbox (==build bot) name: 17.1_desktop_plasma-20230731-184110 ------------------------------------------------------------------- gcc-config -l: [1] x86_64-pc-linux-gnu-10 [2] x86_64-pc-linux-gnu-13 * clang/llvm (if any): clang version 16.0.6 Target: x86_64-pc-linux-gnu Thread model: posix InstalledDir: /usr/lib/llvm/16/bin Configuration file: /etc/clang/clang.cfg /usr/lib/llvm/16 16.0.6 Python 3.11.4 Available Ruby profiles: [1] ruby31 (with Rubygems) * Available Rust versions: [1] rust-1.71.0 * The following VMs are available for generation-2: 1) Eclipse Temurin JDK 11.0.19_p7 [openjdk-bin-11] *) Eclipse Temurin JDK 17.0.7_p7 [openjdk-bin-17] 3) Eclipse Temurin JDK 8.372_p07 [openjdk-bin-8] Available Java Virtual Machines: [1] openjdk-bin-8 [2] openjdk-bin-11 [3] openjdk-bin-17 system-vm php cli (if any): go version go1.20.6 linux/amd64 HEAD of ::gentoo commit f8097d1a7eb0388264657f953093d19fd1259e27 Author: Repository mirror & CI <repomirrorci@gentoo.org> Date: Thu Aug 3 07:01:41 2023 +0000 2023-08-03 07:01:41 UTC emerge -qpvO sci-chemistry/mdtraj [ebuild N ] sci-chemistry/mdtraj-1.9.7 USE="-test" PYTHON_TARGETS="python3_11 -python3_10"
Created attachment 866917 [details] emerge-info.txt
Created attachment 866918 [details] emerge-history.txt
Created attachment 866919 [details] environment
Created attachment 866920 [details] etc.clang.tar.xz
Created attachment 866921 [details] etc.portage.tar.xz
Created attachment 866922 [details] sci-chemistry:mdtraj-1.9.7:20230803-080753.log
Created attachment 866923 [details] temp.tar.xz
The bug has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=bd539f89b5aa658654fd717864e6210913d05942 commit bd539f89b5aa658654fd717864e6210913d05942 Author: Sam James <sam@gentoo.org> AuthorDate: 2023-08-13 00:51:37 +0000 Commit: Sam James <sam@gentoo.org> CommitDate: 2023-08-13 00:51:37 +0000 sci-chemistry/mdtraj: depend on <cython-3 Bug: https://bugs.gentoo.org/911646 Signed-off-by: Sam James <sam@gentoo.org> sci-chemistry/mdtraj/mdtraj-1.9.7.ebuild | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-)
No reply for half a year, no revdeps.
The bug has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0ac23a5da73e80d5424ab2830cae3eec5b42c2f8 commit 0ac23a5da73e80d5424ab2830cae3eec5b42c2f8 Author: Michał Górny <mgorny@gentoo.org> AuthorDate: 2024-03-10 16:17:08 +0000 Commit: Michał Górny <mgorny@gentoo.org> CommitDate: 2024-03-10 16:36:52 +0000 package.mask: Last rite dev-python/astunparse, sci-chemistry/mdtraj Bug: https://bugs.gentoo.org/911646 Signed-off-by: Michał Górny <mgorny@gentoo.org> profiles/package.mask | 13 +++++++++++++ 1 file changed, 13 insertions(+)
The bug has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=2b1667bc65dcbdcc00c565f1c31976d2c631992a commit 2b1667bc65dcbdcc00c565f1c31976d2c631992a Author: Michał Górny <mgorny@gentoo.org> AuthorDate: 2024-04-13 14:35:28 +0000 Commit: Michał Górny <mgorny@gentoo.org> CommitDate: 2024-04-13 14:36:51 +0000 dev-python/astunparse: Remove last-rited pkg Bug: https://bugs.gentoo.org/911646 Signed-off-by: Michał Górny <mgorny@gentoo.org> dev-python/astunparse/Manifest | 1 - dev-python/astunparse/astunparse-1.6.3-r1.ebuild | 39 ------------ .../astunparse/files/astunparse-1.6.2-tests.patch | 23 ------- .../astunparse/files/astunparse-1.6.3-py39.patch | 74 ---------------------- .../files/astunparse-1.6.3-test-py311.patch | 26 -------- dev-python/astunparse/metadata.xml | 16 ----- profiles/package.mask | 1 - 7 files changed, 180 deletions(-) https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=8e78e2bf9ed815575f8c00157166095423e14681 commit 8e78e2bf9ed815575f8c00157166095423e14681 Author: Michał Górny <mgorny@gentoo.org> AuthorDate: 2024-04-13 14:32:16 +0000 Commit: Michał Górny <mgorny@gentoo.org> CommitDate: 2024-04-13 14:33:01 +0000 sci-chemistry/mdtraj: Remove last-rited pkg Bug: https://bugs.gentoo.org/911646 Signed-off-by: Michał Górny <mgorny@gentoo.org> profiles/package.mask | 2 - sci-chemistry/mdtraj/Manifest | 1 - .../mdtraj/files/mdtraj-1.9.7-python311.patch | 16 ------- sci-chemistry/mdtraj/mdtraj-1.9.7.ebuild | 49 ---------------------- sci-chemistry/mdtraj/metadata.xml | 12 ------ 5 files changed, 80 deletions(-)
