https://blogs.gentoo.org/ago/2020/07/04/gentoo-tinderbox/ Issue: sci-libs/cholmod-3.0.14 fails to compile. Discovered on: amd64 (internal ref: ci)
Created attachment 861060 [details] build.log build log and emerge --info
Created attachment 861061 [details] 1-config.log 1-config.log
Error(s) that match a know pattern in addition to what has been reported in the summary: configure: error: Could not find metis library configure: error: Could not find metis library
configure:16348: checking for METIS_NodeND in -lmetis configure:16373: x86_64-pc-linux-gnu-gcc -o conftest -O2 -march=x86-64 -pipe -pipe -frecord-gcc-switches -fno-diagnostics-color -fmessage-length=0 -I/usr/include/metis -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -lmetis conftest.c -lmetis -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -lmetis -lrt -lm >&5 /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../x86_64-pc-linux-gnu/bin/ld: /usr/lib/gcc/x86_64-pc-linux-gnu/13/../../../../lib64/libmetis.so: undefined reference to `gk_malloc_cleanup'
The bug has been closed via the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=0df978301da3f85b322ea621500dca812c6c8a0f commit 0df978301da3f85b322ea621500dca812c6c8a0f Author: Andrew Ammerlaan <andrewammerlaan@gentoo.org> AuthorDate: 2023-05-03 08:44:04 +0000 Commit: Andrew Ammerlaan <andrewammerlaan@gentoo.org> CommitDate: 2023-05-03 08:49:14 +0000 sci-libs/metis: fixup pkgconfig file Newer versions of metis no longer have gklib bundled. For backwards compatibility add gklib to the pkgconfig file for software that still assumes that gklib is part of metis. Closes: https://bugs.gentoo.org/905632 Bug: https://bugs.gentoo.org/704348 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org> sci-libs/metis/{metis-5.2.1.ebuild => metis-5.2.1-r1.ebuild} | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) Additionally, it has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=bf207af9976559a6e11ba760fc967f1f6cf0808a commit bf207af9976559a6e11ba760fc967f1f6cf0808a Author: Andrew Ammerlaan <andrewammerlaan@gentoo.org> AuthorDate: 2023-05-03 08:48:12 +0000 Commit: Andrew Ammerlaan <andrewammerlaan@gentoo.org> CommitDate: 2023-05-03 08:49:15 +0000 sci-libs/parmetis: fixup pkgconfig file Newer versions of parmetis no longer have gklib bundled. For backwards compatibility add gklib to the pkgconfig file for software that still assumes that gklib is part of parmetis. Bug: https://bugs.gentoo.org/905632 Closes: https://bugs.gentoo.org/704348 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org> ...etis-4.0.3_p20230326.ebuild => parmetis-4.0.3_p20230326-r1.ebuild} | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-)
*** Bug 905641 has been marked as a duplicate of this bug. ***
The bug has been referenced in the following commit(s): https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=4c2662713534dc1b7abf9f546d53af0ea6ea8ecb commit 4c2662713534dc1b7abf9f546d53af0ea6ea8ecb Author: Sam James <sam@gentoo.org> AuthorDate: 2023-05-03 09:24:37 +0000 Commit: Sam James <sam@gentoo.org> CommitDate: 2023-05-03 09:24:37 +0000 profiles: mask gone (para)metis versions to force upgrades Bug: https://bugs.gentoo.org/704348 Bug: https://bugs.gentoo.org/905632 Bug: https://bugs.gentoo.org/905641 Signed-off-by: Sam James <sam@gentoo.org> profiles/package.mask | 6 ++++++ 1 file changed, 6 insertions(+)
