Build failed with error message: ninja: error: '/usr/lib64/libdl.so', needed by 'lib64/libvtkIONetCDF-9.0.so.9.0.3', missing and no known rule to make it Reproducible: Always sci-libs/vtk-9.1.0 from PR https://github.com/gentoo/gentoo/pull/22878 also affected: ninja: error: '/usr/lib64/libdl.so', needed by 'lib64/libvtkexodusII-9.1.so.9.1.0', missing and no known rule to make it
Created attachment 757207 [details] build log
Portage 3.0.28 (python 3.9.9-final-0, default/linux/amd64/17.1/desktop, gcc-11.2.1, glibc-2.34-r3, 5.15.4-gentoo-dist x86_64) ================================================================= System uname: Linux-5.15.4-gentoo-dist-x86_64-AMD_Ryzen_7_2700X_Eight-Core_Processor-with-glibc2.34 KiB Mem: 32891748 total, 6888668 free KiB Swap: 0 total, 0 free Timestamp of repository gentoo: Thu, 02 Dec 2021 08:36:39 +0000 Head commit of repository gentoo: 2fb7dcec35f6d78e2a57ef7d5247fb8d4e85c7e3 sh bash 5.1_p12 ld GNU ld (Gentoo 2.37_p1 p1) 2.37 distcc 3.4 x86_64-pc-linux-gnu [disabled] ccache version 4.4.2 [disabled] app-shells/bash: 5.1_p12::gentoo dev-java/java-config: 2.3.1::gentoo dev-lang/perl: 5.34.0-r5::gentoo dev-lang/python: 2.7.18_p13::gentoo, 3.8.12_p1::gentoo, 3.9.9::gentoo, 3.10.0_p1::gentoo dev-lang/rust: 1.56.1::gentoo dev-util/ccache: 4.4.2::gentoo dev-util/cmake: 3.22.0::gentoo sys-apps/baselayout: 2.8::gentoo sys-apps/openrc: 0.44.9::gentoo sys-apps/sandbox: 2.29::gentoo sys-devel/autoconf: 2.13-r1::gentoo, 2.71-r1::gentoo sys-devel/automake: 1.13.4-r2::gentoo, 1.16.5::gentoo sys-devel/binutils: 2.36.1-r2::gentoo, 2.37_p1-r1::gentoo sys-devel/gcc: 10.3.1_p20211126::gentoo, 11.2.1_p20211127::gentoo sys-devel/gcc-config: 2.4::gentoo sys-devel/libtool: 2.4.6-r6::gentoo sys-devel/make: 4.3::gentoo sys-kernel/linux-headers: 5.15-r1::gentoo (virtual/os-headers) sys-libs/glibc: 2.34-r3::gentoo ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="@FREE" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php7.3/ext-active/ /etc/php/apache2-php7.4/ext-active/ /etc/php/apache2-php8.0/ext-active/ /etc/php/cgi-php7.3/ext-active/ /etc/php/cgi-php7.4/ext-active/ /etc/php/cgi-php8.0/ext-active/ /etc/php/cli-php7.3/ext-active/ /etc/php/cli-php7.4/ext-active/ /etc/php/cli-php8.0/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-O2 -pipe" DISTDIR="/var/cache/distfiles" ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://mirror.yandex.ru/gentoo-distfiles/" LANG="ru_RU.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" LINGUAS="ru en" MAKEOPTS="-j9" PKGDIR="/var/cache/binpkgs" PORTAGE_BINHOST="http://pkgs.anton.local" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" USE="X a52 aac acl acpi alsa amd64 apache2 avahi bash-completion bluetooth branding bzip2 cairo caps cdda cdr cli crypt cups curl dbus dist-kernel djvu dri dts dv dvd dvdr dvi elogind emboss encode examples exif fam ffmpeg flac fortran gdbm gif glitz gnome-keyring gnutls gphoto2 gpm gtk gtk2 gui hal haskell iconv icu idn introspection ipv6 irmc jabber java6 jbig jpeg jpeg2k lame lcms libglvnd libnotify libsecret libtirpc linguas_ru mad mailwrapper mate mms mmx mng mozdevelop mozsvg mozxmlterm mp3 mp4 mpeg mtp multilib ncurses nls nptl nptlonly ogg opengl openmp opus pam pango pascal pcre pdf php pipewire png policykit ppds pulseaudio python qmail qt5 readline ruby samba scanner sdl seccomp semantic-desktop spell split-usr sql sse sse2 ssl startup-notification svg t1lib theora tiff truetype udev udisks unicode upower usb v4l v4l2 vaapi vala vcd vdpau vhosts vorbis vulkan wayland webp win32codecs wxwidgets x264 x265 xattr xcb xine xinerama xml xmp xulrunner xv xvid zlib" ABI_X86="64 32" ADA_TARGET="gnat_2020" ALSA_CARDS="cmipci emu10k1 emu10k1x ens1370 ens1371 hda-intel hdsp hdspm ice1712 ice1724 intel8x0 intel8x0m mpu401 via82xx via82xx-modem atiixp" APACHE2_MODULES="socache_shmcb authn_core authz_core unixd access auth authz_host auth_dbm auth_anon auth_digest alias file-cache echo charset-lite cache disk-cache mem-cache filter deflate mime-magic cern-meta expires headers usertrack unique_id proxy proxy-connect proxy-ftp proxy-http info include cgi cgid dav dav-fs vhost-alias speling rewrite log_config logio env setenvif mime status autoindex asis negotiation dir imap actions userdir so http2 lbmethod_bybusyness lbmethod_byrequests lbmethod_bytraffic lbmethod_heartbeat proxy_balancer proxy_connect proxy_fcgi proxy_ftp proxy_html proxy_http proxy_http2 proxy_scgi proxy_wstunnel ratelimit remoteip slotmem_shm xml2enc" APACHE2_MPMS="event" CALLIGRA_FEATURES="karbon sheets words" CAMERAS="adc65 agfa_cl20 aox barbie canon casio_qv clicksmart310 digigr8 digita dimagev dimera3500 directory enigma13 fuji gsmart300 hp215 iclick jamcam jd11 kodak_dc120 kodak_dc210 kodak_dc240 kodak_dc3200 kodak_ez200 konica konica_qm150 largan lg_gsm mars mustek panasonic_coolshot panasonic_dc1000 panasonic_dc1580 panasonic_l859 pccam300 pccam600 polaroid_pdc320 polaroid_pdc640 polaroid_pdc700 ptp2 ricoh ricoh_g3 samsung sierra sipix_blink sipix_blink2 sipix_web2 smal sonix sony_dscf1 sony_dscf55 soundvision spca50x sq905 stv0674 stv0680 sx330z template toshiba_pdrm11" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx sse sse2 mmxext" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev wacom synaptics mutouch" KERNEL="linux" L10N="ru en" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer pdfimport scripting-beanshell scripting-javascript wiki-publisher nlpsolver" LLVM_TARGETS="AMDGPU BPF X86 NVPTX" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" NGINX_MODULES_HTTP="access auth_basic autoindex browser charset empty_gif fastcgi geo gzip limit_conn limit_req map memcached proxy referer rewrite scgi split_clients ssi upstream_ip_hash userid uwsgi addition dav dav_ext gunzip gzip_static naxsi realip spdy sticky xslt" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-3 php7-4 php8-0" POSTGRES_TARGETS="postgres13" PYTHON_SINGLE_TARGET="python3_8" PYTHON_TARGETS="python3_8 python3_9" QEMU_SOFTMMU_TARGETS="x86_64 i386 mipsel" QEMU_USER_TARGETS="x86_64 i386 mipsel" RUBY_TARGETS="ruby26 ruby27 ruby30" USERLAND="GNU" VIDEO_CARDS="intel nouveau radeon radeonsi amdgpu i965" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq proto steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, RUSTFLAGS
Thanks for the report. Original doesn't seem fixed so I'll reopen that: bug 827188. *** This bug has been marked as a duplicate of bug 827188 ***
Wait. What version of netcdf?
