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Bug 741198 - sci-biology/seaview-4.6 fails to compile
Summary: sci-biology/seaview-4.6 fails to compile
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Science Biology related packages
Depends on:
Reported: 2020-09-08 15:00 UTC by Agostino Sarubbo
Modified: 2020-11-01 18:36 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---

build.log (build.log,14.38 KB, text/plain)
2020-09-08 15:00 UTC, Agostino Sarubbo

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Description Agostino Sarubbo gentoo-dev 2020-09-08 15:00:16 UTC

Issue: sci-biology/seaview-4.6 fails to compile.
Discovered on: amd64 (internal ref: tinderbox)

This machine uses a clang/LLVM toolchain.
If you think that this issue is strictly related to clang/LLVM please block bug 408963. If you think that this issue is strictly related to the LLD linker, please block bug 731004.
This machine uses also GLIBC-2.32. If you think that this issue is strictly related to GLIBC please block bug 736174.
Comment 1 Agostino Sarubbo gentoo-dev 2020-09-08 15:00:18 UTC
Created attachment 659162 [details]

build log and emerge --info
Comment 2 Larry the Git Cow gentoo-dev 2020-11-01 18:36:54 UTC
The bug has been closed via the following commit(s):

commit cc1e91fc1e8a7302af0ab19c8ad3c5ef5721ec92
Author:     David Seifert <>
AuthorDate: 2020-11-01 18:36:14 +0000
Commit:     David Seifert <>
CommitDate: 2020-11-01 18:36:14 +0000

    sci-biology/seaview: Port to EAPI 7
    * Fix building against GCC 10 / -fno-common
    * Fix building against Clang
    Package-Manager: Portage-3.0.8, Repoman-3.0.2
    Signed-off-by: David Seifert <>

 ...eaview-4.6-Wreserved-user-defined-literal.patch |  76 ++++++++++++++
 .../seaview/files/seaview-4.6-fno-common.patch     | 110 +++++++++++++++++++++
 .../{seaview-4.6.ebuild => seaview-4.6-r1.ebuild}  |  29 +++---
 3 files changed, 203 insertions(+), 12 deletions(-)