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Bug 700728 - sys-apps/systemd-243-r2: bootup timing faults in combination with md raid
Summary: sys-apps/systemd-243-r2: bootup timing faults in combination with md raid
Status: RESOLVED UPSTREAM
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal major
Assignee: Gentoo systemd Team
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2019-11-19 21:53 UTC by Mario Hein
Modified: 2020-02-23 17:28 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
output of journalctl -b -o short-precise (bootup.log,88.07 KB, text/plain)
2019-11-19 21:59 UTC, Mario Hein
Details

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Description Mario Hein 2019-11-19 21:53:46 UTC
On bootup, a race condition between the processes
* kernel: md/raid
* systemd-fsck
can occur.


Reproducible: Sometimes

Steps to Reproduce:
bootup/reboot

Actual Results:  
The process systemd-fsck tries to check /dev/md* before the raid is properly assembled, resulting in file system errors. The bootup process stops and systemd enters emergency mode.

Expected Results:  
Normal bootup in the following order:
1. assemble md/autoraid
2. perform systemd-fsck
3. mount partitions

My system uses md software raid with autodetection on bootup.
configuration:

/dev/sda1 /boot            ext4
/dev/sda2 /                ext4
/dev/md2  /home            ext4 (raid1 of /dev/sdb2 /dev/sdc2)
/dev/md3  /var/tmp/portage ext4 (raid0 of /dev/sdb3 /dev/sdc3)

The system ran fine for years in this configuration until a recent update.



output of emerge --info:

Portage 2.3.76 (python 3.6.9-final-0, default/linux/amd64/17.1/desktop/gnome/systemd, gcc-9.2.0, glibc-2.29-r2, 4.19.82-gentoo x86_64)
=================================================================
System uname: Linux-4.19.82-gentoo-x86_64-AMD_Phenom-tm-_II_X4_945_Processor-with-gentoo-2.6
KiB Mem:     8159096 total,   3857360 free
KiB Swap:  136314872 total, 136314872 free
Timestamp of repository gentoo: Thu, 14 Nov 2019 08:45:01 +0000
Head commit of repository gentoo: e64d6fba8ed13603a8280f7c633211d4542cb5d0
sh bash 4.4_p23-r1
ld GNU ld (Gentoo 2.32 p2) 2.32.0
app-shells/bash:          4.4_p23-r1::gentoo
dev-java/java-config:     2.2.0-r4::gentoo
dev-lang/perl:            5.28.2-r1::gentoo
dev-lang/python:          2.7.16::gentoo, 3.6.9::gentoo
dev-util/cmake:           3.14.6::gentoo
dev-util/pkgconfig:       0.29.2::gentoo
sys-apps/baselayout:      2.6-r1::gentoo
sys-apps/sandbox:         2.13::gentoo
sys-devel/autoconf:       2.13-r1::gentoo, 2.69-r4::gentoo
sys-devel/automake:       1.16.1-r1::gentoo
sys-devel/binutils:       2.32-r1::gentoo
sys-devel/gcc:            9.2.0-r2::gentoo
sys-devel/gcc-config:     2.1::gentoo
sys-devel/libtool:        2.4.6-r3::gentoo
sys-devel/make:           4.2.1-r4::gentoo
sys-kernel/linux-headers: 4.19::gentoo (virtual/os-headers)
sys-libs/glibc:           2.29-r2::gentoo
Repositories:

gentoo
    location: /usr/portage
    sync-type: rsync
    sync-uri: rsync://rsync.de.gentoo.org/gentoo-portage/
    priority: -1000
    sync-rsync-extra-opts: 
    sync-rsync-verify-jobs: 1
    sync-rsync-verify-max-age: 24
    sync-rsync-verify-metamanifest: yes

x-portage
    location: /usr/local/portage
    masters: gentoo
    priority: 0

mv
    location: /var/lib/layman/mv
    masters: gentoo
    priority: 50

ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="@FREE AdobeFlash-11.x Aladdin AVASYS bh-luxi cnijfilter dlj-1.1 EAPL EPSON FraunhoferFDK freedist google-chrome googleearth linux-firmware linux-fw-redistributable MPEG-4 MSttfEULA no-source-code Oracle-BCLA-JavaSE PUEL Q3AEULA RAR skype-4.0.0.7-copyright unRAR"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=amdfam10 -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=amdfam10 -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY GOBIN PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs collision-protect config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch pid-sandbox preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo ftp://ftp.uni-erlangen.de/pub/mirrors/gentoo"
LANG="de_DE.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j4"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
USE="X a52 aac acl acpi alsa amd64 berkdb bzip2 cairo cdda cddb cdparanoia cdr clamav cli colord crypt css cups cxx dbus dri dts dvd dvdr dvdread egl emboss encode epub evo exif fam ffmpeg flac fortran gdbm gif glamor gnome gnome-keyring gnome-online-accounts gphoto2 gpm gstreamer gtk gtk3 handbook iconv icu introspection ipv6 java jpeg lame lcms ldap libnotify libsecret libtirpc lm_sensors mad mng mp3 mp4 mpeg multilib nautilus ncurses networkmanager nls nptl nsplugin ogg opengl openmp openvg pam pango pcre pdf png policykit ppds pulseaudio qt5 quicktime raw readline samba scanner sdl seccomp spell split-usr ssl startup-notification svg systemd tcpd threads tiff tracker truetype udev udisks unicode upower usb vdpau vorbis wayland win32codecs wxwidgets x264 xattr xcb xml xv xvid xvmc zeroconf zlib" ABI_X86="64" ADA_TARGET="gnat_2018" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="3dnow 3dnowext mmx mmxext sse sse2 sse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="evdev keyboard mouse" KERNEL="linux" L10N="de" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" NETBEANS_MODULES="apisupport cnd groovy gsf harness ide identity j2ee java mobility nb php profiler soa visualweb webcommon websvccommon xml" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php7-2" POSTGRES_TARGETS="postgres10 postgres11" PYTHON_SINGLE_TARGET="python3_6" PYTHON_TARGETS="python2_7 python3_6" RUBY_TARGETS="ruby24 ruby25" SANE_BACKENDS="snapscan" USERLAND="GNU" VIDEO_CARDS="amdgpu r600 radeon radeonsi" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 Mario Hein 2019-11-19 21:59:17 UTC
Created attachment 596844 [details]
output of journalctl -b -o short-precise

example of faulty timing of assembling/fsck on md3
Comment 2 Mike Gilbert gentoo-dev 2019-11-19 22:03:40 UTC
Can you reproduce the problem with systemd-9999?
Comment 3 Mario Hein 2019-11-19 23:14:49 UTC
Seems to be fixed in systemd-9999.

I did several reboots. Correct timing, no errors. Everything is fine now.