I was depcleaning about 40 haskel packages and in separate terminal launched emerge okteta -pv These are the packages that would be merged, in order: Calculating dependencies... done! Traceback (most recent call last): File "/usr/lib64/python3.6/site-packages/portage/dbapi/vartree.py", line 742, in aux_get mydir_stat = os.stat(mydir) File "/usr/lib64/python3.6/site-packages/portage/__init__.py", line 250, in __call__ rval = self._func(*wrapped_args, **wrapped_kwargs) FileNotFoundError: [Errno 2] No such file or directory: b'/var/db/pkg/dev-haskell/tf-random-0.5' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/lib/python-exec/python3.6/emerge", line 53, in <module> retval = emerge_main() File "/usr/lib64/python3.6/site-packages/_emerge/main.py", line 1289, in emerge_main return run_action(emerge_config) File "/usr/lib64/python3.6/site-packages/_emerge/actions.py", line 3332, in run_action retval = action_build(emerge_config, spinner=spinner) File "/usr/lib64/python3.6/site-packages/_emerge/actions.py", line 340, in action_build settings, trees, myopts, myparams, myaction, myfiles, spinner) File "/usr/lib64/python3.6/site-packages/_emerge/depgraph.py", line 9755, in backtrack_depgraph myaction, myfiles, spinner) File "/usr/lib64/python3.6/site-packages/_emerge/depgraph.py", line 9792, in _backtrack_depgraph success, favorites = mydepgraph.select_files(myfiles) File "/usr/lib64/python3.6/site-packages/_emerge/depgraph.py", line 3937, in select_files return self._select_files(args) File "/usr/lib64/python3.6/site-packages/_emerge/depgraph.py", line 3946, in _select_files self._load_vdb() File "/usr/lib64/python3.6/site-packages/_emerge/depgraph.py", line 648, in _load_vdb fake_vartree.sync() File "/usr/lib64/python3.6/site-packages/_emerge/FakeVartree.py", line 213, in sync self._sync() File "/usr/lib64/python3.6/site-packages/_emerge/FakeVartree.py", line 262, in _sync pkg = self._pkg(cpv) File "/usr/lib64/python3.6/site-packages/_emerge/FakeVartree.py", line 284, in _pkg self._real_vardb.aux_get(cpv, self._db_keys)), File "/usr/lib64/python3.6/site-packages/portage/dbapi/vartree.py", line 746, in aux_get raise KeyError(mycpv) KeyError: 'dev-haskell/tf-random-0.5' Portage 2.3.40 (python 3.6.5-final-0, default/linux/amd64/17.0/desktop/plasma, gcc-7.3.0, glibc-2.27-r3, 4.16.15-gentoo x86_64) ================================================================= System Settings ================================================================= System uname: Linux-4.16.15-gentoo-x86_64-AMD_Ryzen_Threadripper_1950X_16-Core_Processor-with-gentoo-2.6 KiB Mem: 64809388 total, 58673488 free KiB Swap: 16777208 total, 16777208 free Timestamp of repository gentoo: Wed, 13 Jun 2018 01:46:14 +0000 Head commit of repository gentoo: 8e7e9c1e239976a3338082adfa75684c8e2fe90a Head commit of repository steam-overlay: 46d2624c5f248bf28e25c25e172e60c2eb988e5f sh bash 4.4_p23 ld GNU ld (Gentoo 2.30 p2) 2.30.0 distcc[103014] (dcc_mkdir) ERROR: mkdir '/tmp/portage/.distcc/state' failed: No such file or directory [disabled] app-shells/bash: 4.4_p23::gentoo dev-java/java-config: 2.2.0-r4::gentoo dev-lang/perl: 5.26.2::gentoo dev-lang/python: 2.7.14-r2::gentoo, 3.6.5-r1::gentoo dev-util/cmake: 3.11.3::gentoo dev-util/pkgconfig: 0.29.2::gentoo sys-apps/baselayout: 2.6::gentoo sys-apps/openrc: 0.36::gentoo sys-apps/sandbox: 2.13::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69-r4::gentoo sys-devel/automake: 1.16.1-r1::gentoo sys-devel/binutils: 2.30-r2::gentoo sys-devel/gcc: 7.3.0-r3::gentoo sys-devel/gcc-config: 1.9.1::gentoo sys-devel/libtool: 2.4.6-r5::gentoo sys-devel/make: 4.2.1-r3::gentoo sys-kernel/linux-headers: 4.16-r1::gentoo (virtual/os-headers) sys-libs/glibc: 2.27-r3::gentoo Repositories: gentoo location: /var/db/repos/gentoo sync-type: git sync-uri: https://github.com/gentoo-mirror/gentoo.git priority: -1000 gyakovlev location: /var/db/repos/gyakovlev masters: gentoo steam-overlay location: /var/db/repos/steam sync-type: git sync-uri: https://github.com/anyc/steam-overlay.git masters: gentoo priority: 50 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="* -@EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-march=native -O2 -pipe" DISTDIR="/var/cache/portage/distfiles" EMERGE_DEFAULT_OPTS="--ask-enter-invalid --jobs=32 --load-average 32" ENV_UNSET="DBUS_SESSION_BUS_ADDRESS DISPLAY PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs buildpkg cgroup collision-protect compressdebug config-protect-if-modified distlocks downgrade-backup ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news parallel-fetch parallel-install preserve-libs protect-owned sandbox sfperms sign splitdebug strict strict-keepdir unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="https://gentoo.osuosl.org/ http://gentoo.mirrors.pair.com/ http://cosmos.illinois.edu/pub/gentoo/ http://lug.mtu.edu/gentoo/" LANG="en_US.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" LINGUAS="en" MAKEOPTS="-j32 -l32" PKGDIR="/var/cache/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/tmp" USE="X a52 aac acl acpi activities alsa amd64 bash-completion berkdb bluray branding bzip2 cairo cdda cdr cli crypt cups cxx dbus declarative djvu dri dts dvd dvdr elogind emboss encode epub exif fam fbcon flac fontconfig fortran gdbm gif glamor gpm gtk iconv ios ipv6 jit jpeg kde kipi kwallet lcms libnotify libtirpc lm_sensors lz4 lzma lzo mad mng mobi module-sign modules mp3 mp4 mpeg multilib ncurses nls nptl numa ogg opengl openmp pam pango pcre pdf phonon plasma png policykit ppds qml qt5 readline seccomp semantic-desktop smp spell ssl startup-notification svg tiff truetype udev udisks unicode upower urandom usb vaapi vdpau vim-syntax vorbis wayland widgets x264 xattr xcb xcomposite xinerama xml xscreensaver xv xvid zlib" ABI_X86="32 64" ALSA_CARDS="hda-intel" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon plan sheets stage words" CAMERAS="ptp2 fuji" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx avx2 f16c fma3 mmx mmxext pclmul popcnt sse sse2 sse3 sse4_1 sse4_2 sse4a ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock isync itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64" INPUT_DEVICES="libinput" KERNEL="linux" L10N="en" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-6 php7-0" POSTGRES_TARGETS="postgres9_5" PYTHON_SINGLE_TARGET="python3_6" PYTHON_TARGETS="python2_7 python3_6" RUBY_TARGETS="ruby24 ruby25" USERLAND="GNU" VIDEO_CARDS="amdgpu radeon radeonsi" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS ================================================================= Package Settings ================================================================= sys-apps/portage-2.3.40-r1::gentoo was built with the following: USE="gentoo-dev (ipc) native-extensions rsync-verify xattr -build -doc -epydoc (-selinux)" ABI_X86="(64)" PYTHON_TARGETS="python2_7 python3_6 -pypy -python3_4 -python3_5" Reproducible: Always Steps to Reproduce: 1. launch emerge --depclean that will take some time 2. in separate shell run emerge somepackage -pv 3. watch portage emit errors Actual Results: emerge okteta -pv These are the packages that would be merged, in order: Calculating dependencies... done! Traceback (most recent call last): File "/usr/lib64/python3.6/site-packages/portage/dbapi/vartree.py", line 742, in aux_get mydir_stat = os.stat(mydir) File "/usr/lib64/python3.6/site-packages/portage/__init__.py", line 250, in __call__ rval = self._func(*wrapped_args, **wrapped_kwargs) FileNotFoundError: [Errno 2] No such file or directory: b'/var/db/pkg/dev-haskell/attoparsec-0.13.1.0' During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/usr/lib/python-exec/python3.6/emerge", line 53, in <module> retval = emerge_main() File "/usr/lib64/python3.6/site-packages/_emerge/main.py", line 1289, in emerge_main return run_action(emerge_config) File "/usr/lib64/python3.6/site-packages/_emerge/actions.py", line 3332, in run_action retval = action_build(emerge_config, spinner=spinner) File "/usr/lib64/python3.6/site-packages/_emerge/actions.py", line 340, in action_build settings, trees, myopts, myparams, myaction, myfiles, spinner) File "/usr/lib64/python3.6/site-packages/_emerge/depgraph.py", line 9755, in backtrack_depgraph myaction, myfiles, spinner) File "/usr/lib64/python3.6/site-packages/_emerge/depgraph.py", line 9792, in _backtrack_depgraph success, favorites = mydepgraph.select_files(myfiles) File "/usr/lib64/python3.6/site-packages/_emerge/depgraph.py", line 3937, in select_files return self._select_files(args) File "/usr/lib64/python3.6/site-packages/_emerge/depgraph.py", line 3946, in _select_files self._load_vdb() File "/usr/lib64/python3.6/site-packages/_emerge/depgraph.py", line 648, in _load_vdb fake_vartree.sync() File "/usr/lib64/python3.6/site-packages/_emerge/FakeVartree.py", line 213, in sync self._sync() File "/usr/lib64/python3.6/site-packages/_emerge/FakeVartree.py", line 262, in _sync pkg = self._pkg(cpv) File "/usr/lib64/python3.6/site-packages/_emerge/FakeVartree.py", line 284, in _pkg self._real_vardb.aux_get(cpv, self._db_keys)), File "/usr/lib64/python3.6/site-packages/portage/dbapi/vartree.py", line 746, in aux_get raise KeyError(mycpv) KeyError: 'dev-haskell/attoparsec-0.13.1.0' Expected Results: emerge calculates deps and shows pretend list
I have parallel-install in FEATURES. can this be the reason?
The issue is that portage does not use locking unless emerge is running as the root user. *** This bug has been marked as a duplicate of bug 231801 ***