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Bug 631620 - dev-lang/R-3.4.1 : running code in reg-tests-3.R make[3]: *** [Makefile.common:100: reg-tests-3.Rout] Error 1
Summary: dev-lang/R-3.4.1 : running code in reg-tests-3.R make[3]: *** [Makefile.commo...
Status: CONFIRMED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Science Mathematics related packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2017-09-21 08:55 UTC by Toralf Förster
Modified: 2020-04-18 01:23 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
emerge-info.txt (emerge-info.txt,15.31 KB, text/plain)
2017-09-21 08:55 UTC, Toralf Förster
Details
dev-lang:R-3.4.1:20170921-081454.log (dev-lang:R-3.4.1:20170921-081454.log,351.01 KB, text/plain)
2017-09-21 08:55 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,105.33 KB, text/plain)
2017-09-21 08:55 UTC, Toralf Förster
Details
temp.tbz2 (temp.tbz2,55.92 KB, text/plain)
2017-09-21 09:14 UTC, Toralf Förster
Details
logs.tbz2 (logs.tbz2,42.33 KB, text/plain)
2017-09-21 09:14 UTC, Toralf Förster
Details
environment (environment,120.49 KB, text/plain)
2017-09-21 09:15 UTC, Toralf Förster
Details
etc.portage.tbz2 (etc.portage.tbz2,14.11 KB, text/plain)
2017-09-21 09:15 UTC, Toralf Förster
Details

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Description Toralf Förster gentoo-dev 2017-09-21 08:55:08 UTC
make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/tests'
make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/tests'
running code in 'reg-tests-3.R' ...make[3]: *** [Makefile.common:100: reg-tests-3.Rout] Error 1
make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/tests'
make[2]: *** [Makefile.common:275: test-Reg] Error 2
make[2]: Leaving directory '/var/tmp/portage/dev-lang/R-3.4.1/work/R-3.4.1/tests'

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 13.0-desktop_libressl_20170918-162903

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-6.4.0 *

Available Python interpreters, in order of preference:
  [1]   python3.4
  [2]   python3.6 (fallback)
  [3]   python2.7 (fallback)

java-config:
The following VMs are available for generation-2:
*)	IcedTea JDK 3.5.1 [icedtea-bin-8]
Available Java Virtual Machines:
  [1]   icedtea-bin-8  system-vm

emerge -qpv dev-lang/R
[ebuild  N    ] dev-lang/R-3.4.1  USE="X cairo icu jpeg nls openmp png readline tiff -doc -java -lapack -minimal -perl (-prefix) -profile -static-libs -tk"
Comment 1 Toralf Förster gentoo-dev 2017-09-21 08:55:12 UTC
Created attachment 495764 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2017-09-21 08:55:15 UTC
Created attachment 495766 [details]
dev-lang:R-3.4.1:20170921-081454.log
Comment 3 Toralf Förster gentoo-dev 2017-09-21 08:55:18 UTC
Created attachment 495768 [details]
emerge-history.txt
Comment 4 Toralf Förster gentoo-dev 2017-09-21 09:14:16 UTC
Created attachment 495770 [details]
temp.tbz2

temp.tbz2
Comment 5 Toralf Förster gentoo-dev 2017-09-21 09:14:29 UTC
Created attachment 495772 [details]
logs.tbz2

logs.tbz2
Comment 6 Toralf Förster gentoo-dev 2017-09-21 09:15:14 UTC
Created attachment 495774 [details]
environment

environment
Comment 7 Toralf Förster gentoo-dev 2017-09-21 09:15:34 UTC
Created attachment 495776 [details]
etc.portage.tbz2

etc.portage.tbz2
Comment 8 Mark Wright gentoo-dev 2018-07-05 04:40:11 UTC
R 3.5.1 passes tests for me (apart from being blocked from accessing the
internet with network-sandbox), including this test:

make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/tests'
make[3]: Entering directory '/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/tests'
running code in 'reg-tests-3.R' ... OK
  comparing 'reg-tests-3.Rout' to './reg-tests-3.Rout.save' ... OK
running code in 'reg-examples3.R' ... OK
  comparing 'reg-examples3.Rout' to './reg-examples3.Rout.save' ... OK
running tests of plotting Latin-1
  expect failure or some differences if not in a Latin-1 or UTF-8 locale
running code in 'reg-plot-latin1.R' ... OK
  comparing 'reg-plot-latin1.pdf' to './reg-plot-latin1.pdf.save' ... OK
running code in 'reg-S4.R' ... OK
  comparing 'reg-S4.Rout' to './reg-S4.Rout.save' ... OK
make[3]: Leaving directory '/var/tmp/portage/dev-lang/R-3.5.1/work/R-3.5.1/tests'