Created attachment 438644 [details] build.log =sci-visualization/paraview-4.4.0 builds fine w/o the python use flag, it fails with it. Portage 2.3.0_rc1 (python 2.7.11-final-0, default/linux/amd64/13.0/desktop/gnome/systemd, gcc-5.3.0, glibc-2.23-r2, 4.5.1-gentoo x86_64) ================================================================= System uname: Linux-4.5.1-gentoo-x86_64-Intel-R-_Core-TM-_i7-4510U_CPU_@_2.00GHz-with-gentoo-2.2 KiB Mem: 12188244 total, 2382156 free KiB Swap: 11718652 total, 11611004 free Timestamp of repository gentoo: Fri, 24 Jun 2016 08:00:01 +0000 sh bash 4.3_p46 ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1 app-shells/bash: 4.3_p46::gentoo dev-java/java-config: 2.2.0-r3::gentoo dev-lang/perl: 5.24.0-r1::gentoo dev-lang/python: 2.7.11-r2::gentoo, 3.4.4::gentoo dev-util/cmake: 3.5.2-r1::gentoo dev-util/pkgconfig: 0.29.1::gentoo sys-apps/baselayout: 2.2::gentoo sys-apps/openrc: 0.21::gentoo sys-apps/sandbox: 2.10-r2::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69-r2::gentoo sys-devel/automake: 1.11.6-r2::gentoo, 1.13.4-r1::gentoo, 1.14.1-r1::gentoo, 1.15-r2::gentoo sys-devel/binutils: 2.25.1-r1::gentoo sys-devel/gcc: 5.3.0::gentoo, 5.4.0::gentoo sys-devel/gcc-config: 1.8-r1::gentoo sys-devel/libtool: 2.4.6-r2::gentoo sys-devel/make: 4.2.1::gentoo sys-kernel/linux-headers: 4.6::gentoo (virtual/os-headers) sys-libs/glibc: 2.23-r2::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 chymeric location: /home/chymera/src/overlay masters: gentoo docker location: /usr/local/portage/docker sync-type: git sync-uri: https://github.com/tianon/docker-overlay.git masters: gentoo priority: 6666 science location: /usr/local/portage/sci sync-type: git sync-uri: https://github.com/gentoo-science/sci.git masters: gentoo priority: 7777 neurogentoo location: /home/chymera/src/neurogentoo masters: gentoo priority: 8888 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=native -O2 -pipe" DISTDIR="/usr/portage/distfiles" EMERGE_DEFAULT_OPTS="--keep-going" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="en_GB.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j5" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git" PORTAGE_TMPDIR="/var/tmp" USE="X a52 aac acl acpi alsa amd64 berkdb bluetooth branding bzip2 cairo cdda cli colord cracklib crypt cups cxx dbus dri dts dvd dvdr eds emboss encode evo exif fam firefox flac fortran gdbm gif git glamor gnome gnome-keyring gnome-online-accounts gpm gstreamer gtk gtk3 hidpi iconv introspection ipv6 jpeg lcms ldap libnotify libsecret lm_sensors mad mmx mmxext mng modules mp3 mp4 mpeg multilib nautilus ncurses nls nptl ogg opengl openmp pam pango pcre pdf png policykit ppds pulseaudio qt3support readline samba science sdl seccomp session spell sse sse2 ssl startup-notification svg systemd tcpd tiff tracker truetype udev udisks unicode upower usb vorbis wxwidgets x264 xattr xcb xml xv xvid zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64" INPUT_DEVICES="evdev synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="ar de el en fr ru" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="intel nouveau" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CC, CPPFLAGS, CTARGET, CXX, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
*** Bug 586936 has been marked as a duplicate of this bug. ***
Fascinating: CMake Error: The following variables are used in this project, but they are set to NOTFOUND. Please set them or make sure they are set and tested correctly in the CMake files: MPI_C_LIBRARIES (ADVANCED) linked by target "mpi4py.MPE" in directory [...] [...] MPI_HEADER_PATH used as include directory in directory [...] [...] Can you (if your computational ressources admit it) try to compile with USE="mpi python"? Alternatively, 5.1.0 should be (hopefully) in the tree soon. Can you please give USE="-mpi python" a try for the new version?
*** Bug 585204 has been marked as a duplicate of this bug. ***
*** Bug 562312 has been marked as a duplicate of this bug. ***
commit b570aea62b8e30d9936dda1cdb805e223ffc18f9 Author: Matthias Maier <tamiko@gentoo.org> Date: Sat Jul 9 13:10:40 2016 -0500 sci-visualization/paraview: add a required use constraint, bug #586934 Apparently, configuring paraview with USE="python" requires an MPI installation. Package-Manager: portage-2.2.28
