Created attachment 429474 [details] Build log from emerge -avu dev-lang/gdl The ebuild fails in the configure-phase with the following error-message (sniped, logs follow). Since I have hdf turned off, the error should not occur. ------------------------------------------------------------------------------- -- Found wxWidgets: TRUE -- checking for module 'netcdf' -- found netcdf, version 4.3.2 -- Found NETCDF: netcdf -- Looking for C++ include netcdf.h -- Looking for C++ include netcdf.h - found -- Looking for nc_inq_grps in netcdf -- Looking for nc_inq_grps in netcdf - found -- Found JPEG: /usr/lib64/libjpeg.so CMake Error at CMakeLists.txt:587 (message): HDF4 libraries were not found. Use -DHDFDIR=DIR to specify the HDF directory tree. Use -DHDF=OFF to not use it. (suitable Debian/Ubuntu package: libhdf4-alt-dev) You can use -DJPEGDIR=DIR to specify the JPEG directory tree. You can also use -DSZIPDIR=DIR to specify SZip directory tree if HDF was compiled with SZip support. -- Configuring incomplete, errors occurred! See also "/var/tmp/portage/dev-lang/gdl-0.9.6/work/gdl-0.9.6_build/CMakeFiles/CMakeOutput.log". See also "/var/tmp/portage/dev-lang/gdl-0.9.6/work/gdl-0.9.6_build/CMakeFiles/CMakeError.log". * ERROR: dev-lang/gdl-0.9.6::gentoo failed (configure phase): * cmake failed * * Call stack: * ebuild.sh, line 133: Called src_configure * environment, line 4129: Called configuration '-DPYTHON_MODULE=OFF' '-DPYTHON=OFF' * environment, line 4127: Called cmake-utils_src_configure * environment, line 996: Called _cmake_execute_optionally 'src_configure' * environment, line 356: Called enable_cmake-utils_src_configure * environment, line 1336: Called die * The specific snippet of code: * "${CMAKE_BINARY}" "${cmakeargs[@]}" "${CMAKE_USE_DIR}" || die "cmake failed"; * * If you need support, post the output of `emerge --info '=dev-lang/gdl-0.9.6::gentoo'`, * the complete build log and the output of `emerge -pqv '=dev-lang/gdl-0.9.6::gentoo'`. * The complete build log is located at '/var/tmp/portage/dev-lang/gdl-0.9.6/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/dev-lang/gdl-0.9.6/temp/environment'. * Working directory: '/var/tmp/portage/dev-lang/gdl-0.9.6/work/gdl-0.9.6_build' * S: '/var/tmp/portage/dev-lang/gdl-0.9.6/work/gdl-0.9.6' ------------------------------------------------------------------------------- kohni ~ # emerge -avu dev-lang/gdl These are the packages that would be merged, in order: Calculating dependencies... done! [ebuild U ~] dev-lang/gdl-0.9.6::gentoo [0.9.5-r2::gentoo] USE="eigen fftw imagemagick openmp png python static-libs -grib -gshhs -hdf -hdf5 -netcdf -postscript -proj {-test} -udunits -wxwidgets" PYTHON_TARGETS="python2_7" 0 KiB Total: 1 package (1 upgrade), Size of downloads: 0 KiB Would you like to merge these packages? [Yes/No] n Quitting. kohni ~ # emerge --info Portage 2.2.26 (python 3.4.3-final-0, default/linux/amd64/13.0, gcc-4.9.3, glibc-2.21-r2, 4.1.15-gentoo-r1 x86_64) ================================================================= System uname: Linux-4.1.15-gentoo-r1-x86_64-AMD_FX-tm-6100_Six-Core_Processor-with-gentoo-2.2 KiB Mem: 16462836 total, 9888760 free KiB Swap: 20971516 total, 20715848 free Timestamp of repository gentoo: Fri, 01 Apr 2016 23:30:01 +0000 sh bash 4.3_p42-r1 ld GNU ld (Gentoo 2.25.1 p1.1) 2.25.1 app-shells/bash: 4.3_p42-r1::gentoo dev-java/java-config: 2.2.0::gentoo dev-lang/perl: 5.20.2::gentoo dev-lang/python: 2.7.10-r1::gentoo, 3.4.3-r1::gentoo dev-util/cmake: 3.3.1-r1::gentoo dev-util/pkgconfig: 0.28-r2::gentoo sys-apps/baselayout: 2.2::gentoo sys-apps/openrc: 0.19.1::gentoo sys-apps/sandbox: 2.10-r1::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69::gentoo sys-devel/automake: 1.11.6-r1::gentoo, 1.14.1::gentoo, 1.15::gentoo sys-devel/binutils: 2.25.1-r1::gentoo sys-devel/gcc: 4.9.3::gentoo sys-devel/gcc-config: 1.7.3::gentoo sys-devel/libtool: 2.4.6::gentoo sys-devel/make: 4.1-r1::gentoo sys-kernel/linux-headers: 4.3::gentoo (virtual/os-headers) sys-libs/glibc: 2.21-r2::gentoo Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.gentoo.org/gentoo-portage priority: -1000 stuge location: /var/lib/layman/stuge masters: gentoo priority: 0 science location: /var/lib/layman/science masters: gentoo priority: 1 sunrise location: /var/lib/layman/sunrise masters: gentoo priority: 2 proaudio location: /var/lib/layman/proaudio masters: gentoo priority: 3 x-portage location: /usr/local/portage masters: gentoo priority: 4 ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="* -@EULA @FSF-APPROVED @EULA" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-ggdb -O2 -march=bdver1 -mprefer-avx128 -pipe" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/config /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.6/ext-active/ /etc/php/cgi-php5.6/ext-active/ /etc/php/cli-php5.6/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-ggdb -O2 -march=bdver1 -mprefer-avx128 -pipe" DISTDIR="/usr/portage/distfiles" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe" GENTOO_MIRRORS="http://distfiles.gentoo.org" LANG="de_DE.UTF8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j7" PKGDIR="/usr/portage/packages" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" USE="3dnow 3dnowext X X509 a52 aac additions aim alsa amd64 apng arts audiofile bash-completion berkdb bzip2 cairo calendar cdda cddb cdparanoia cjk classic cli clucene consolekit cpudetection cracklib crypt cups cupsddk curl cxx daap dbus declarative device-mapper dga dhclient divx dri dvb dvd dvipdfm dynamic embedded emerald encode examples exif expat extra extras faac ffmpeg fftw flac float fontconfig fortran fts3 g3dvl gcj gd gdbm git glitz glut gmedia gmp gnome-online-accounts gnutls google graphics gstreamer gtk gtk3 gtkhtml gudev hbci history hpijs hwdb iconv icq icu idn ieee1394 imagemagick imlib ipod ipv6 jabber jack jack-esd jadetex java jpeg kde kdenlive kdepim kerberos kpathsea ladspa lastfm lcms libsamplerate libwww lm_sensors lv2 lzo melt mhash minizip mjpeg mmx mmxext mng modules motif mp3 mplayer mtp multilib musicbrainz mysql ncurses nls nptl nsplugin offensive ofx ogg openexr opengl openmp opus oscar pam pcre perl pkcs11 plasma plplot pmount png policykit portmidi postgres python qt3support qt4 quicktime readline realmedia realtime regex samba scanner science script scripts sdl seccomp semantic-desktop server session slang smartcard snmp soprano sql sqlite sse sse2 ssl startup-notification static-libs subtitles subversion svg swat swig tcl tcltk tcpd theora threads timidity tk truetype unicode utils v4l v4l2 vcd vim vim-syntax vim-with-x vorbis webkit winbind wmf wmp xattr xcb xcomposite xine xinerama xinetd xml xmlrpc xmp xvfb xvid xvmc zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="mmx mmxext sse sse2" DVB_CARDS="usb-wt220u usb-dib0700 dibusb-usb1 dibusb-usb2" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_4" RUBY_TARGETS="ruby20" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CC, CPPFLAGS, CTARGET, CXX, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON kohni ~ #
commit 106e8debddee16f1d6aee4c3661240df09e1c20e Author: Sébastien Fabbro <bicatali@gentoo.org> Date: Mon Apr 4 19:38:40 2016 +0000 dev-lang/gdl: fix bad syntax preventing USE flag switches Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=578806
