nstalling macros in /var/cache/portage/tmpdir/portage/sci-physics/root-6.02.05-r2/image//usr/share/root/macros Installing man(1) pages in /var/cache/portage/tmpdir/portage/sci-physics/root-6.02.05-r2/image//usr/share/man/man1 Installing config files in /var/cache/portage/tmpdir/portage/sci-physics/root-6.02.05-r2/image//etc/root Installing Autoconf macro in /var/cache/portage/tmpdir/portage/sci-physics/root-6.02.05-r2/image//usr/share/aclocal Installing Emacs Lisp library in /var/cache/portage/tmpdir/portage/sci-physics/root-6.02.05-r2/image//usr/share/emacs/site-lisp Installing GDML conversion scripts in /var/cache/portage/tmpdir/portage/sci-physics/root-6.02.05-r2/image//usr/lib64/root Processing hsimple.C... hsimple : Real Time = 0.15 seconds Cpu Time = 0.14 seconds (class TFile *) 0x3bc23f0 ERROR in cling::CIFactory::createCI(): resource directory /etc/root/cling/lib/clang/3.6.0 not found! In file included from input_line_3:2: In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/4.9.2/include/g++-v4/string:40: In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/4.9.2/include/g++-v4/bits/char_traits.h:40: In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/4.9.2/include/g++-v4/bits/postypes.h:40: In file included from /usr/lib/gcc/x86_64-pc-linux-gnu/4.9.2/include/g++-v4/cwchar:44: /usr/include/wchar.h:39:11: fatal error: 'stdarg.h' file not found # include <stdarg.h> ^ lookup.type.by.name.file:1:1: error: unknown type name 'Double32_t' Double32_t ^ *** Break *** segmentation violation $ einfo root WARNING: One or more repositories have missing repo_name entries: /local/home/justin/tree/profiles/repo_name NOTE: Each repo_name entry should be a plain text file containing a unique name for the repository on the first line. Portage 2.2.18 (python 3.4.3-final-0, default/linux/amd64/13.0, gcc-4.9.2-asneeded, glibc-2.20-r2, 4.0.1-lh-nvidia x86_64) ================================================================= System Settings ================================================================= System uname: Linux-4.0.1-lh-nvidia-x86_64-Intel-R-_Core-TM-_i7-2600_CPU_@_3.40GHz-with-gentoo-2.2 KiB Mem: 16342620 total, 2120588 free KiB Swap: 3987452 total, 3976716 free Timestamp of repository gentoo: Tue, 05 May 2015 15:15:01 +0000 sh bash 4.3_p33-r2 ld GNU ld (Gentoo 2.25 p1.0) 2.25 ccache version 3.2.1 [enabled] app-shells/bash: 4.3_p33-r2::gentoo dev-java/java-config: 2.2.0::gentoo dev-lang/perl: 5.20.2::gentoo dev-lang/python: 2.7.9-r2::gentoo-rsync2git, 3.3.5-r1::gentoo, 3.4.3::gentoo dev-util/ccache: 3.2.1-r1::gentoo dev-util/cmake: 3.2.1::gentoo dev-util/pkgconfig: 0.28-r2::gentoo sys-apps/baselayout: 2.2::gentoo sys-apps/openrc: 0.15::gentoo sys-apps/sandbox: 2.6-r1::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69-r1::gentoo sys-devel/automake: 1.10.3-r1::gentoo, 1.11.6-r1::gentoo, 1.12.6::gentoo, 1.13.4::gentoo, 1.14.1::gentoo, 1.15::gentoo sys-devel/binutils: 2.25::gentoo sys-devel/gcc: 4.4.7::gentoo, 4.5.4::gentoo, 4.6.4::gentoo, 4.7.4::gentoo, 4.8.4::gentoo, 4.9.2::gentoo, 5.1.0::gentoo sys-devel/gcc-config: 1.8::gentoo sys-devel/libtool: 2.4.6-r1::gentoo sys-devel/make: 4.1-r1::gentoo sys-kernel/linux-headers: 4.0::gentoo (virtual/os-headers) sys-libs/glibc: 2.20-r2::gentoo Repositories: gentoo location: /var/db/gentoo sync-type: git sync-uri: https://github.com/gentoo/gentoo-portage-rsync-mirror priority: -1000 betagarden location: /local/src/repos/betagarden masters: gentoo priority: 50 dummy location: /local/src/repos/dummy masters: gentoo priority: 50 last-hope location: /local/src/repos/last-hope masters: gentoo priority: 50 science location: /local/src/repos/science masters: gentoo priority: 50 gentoo-cvs location: /local/home/justin/tree masters: gentoo priority: 1000 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -pipe -ftracer -march=native -mtune=native -frecord-gcc-switches -fdiagnostics-color=auto -g -Wimplicit-function-declaration" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/eselect/ /usr/share/gnupg/qualified.txt /usr/share/nano/ /var/lib/hsqldb /var/spool/munin-async/.ssh" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-O2 -pipe -ftracer -march=native -mtune=native -frecord-gcc-switches -fdiagnostics-color=auto -g -Wenum-compare" DISTDIR="/var/cache/portage/distfiles" EMERGE_DEFAULT_OPTS=" -vt --keep-going --autounmask-write --autounmask --quiet-build=n" FCFLAGS="-O2 -pipe -ftracer -march=native -mtune=native -frecord-gcc-switches -fdiagnostics-color=auto -g" FEATURES="assume-digests binpkg-logs buildsyspkg ccache cgroup collision-protect compressdebug distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news noinfo parallel-fetch parallel-install preserve-libs protect-owned sandbox sfperms sign split-log splitdebug strict test-fail-continue unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe -ftracer -march=native -mtune=native -frecord-gcc-switches -fdiagnostics-color=auto -g" GENTOO_MIRRORS=" /mnt/tmpfs/ http://gentoo.j-schmitz.net/mirror/ ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo ftp://ftp.tu-clausthal.de/pub/linux/gentoo/" LANG="en_GB.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--hash-style=gnu -Wl,--sort-common" MAKEOPTS="-j12 -l9" PKGDIR="/var/cache/portage/packages" PORTAGE_COMPRESS="xz" PORTAGE_COMPRESS_FLAGS="-z -e -9 -v" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_EXTRA_OPTS="--omit-dir-times" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" USE="X acl alsa amd64 avx bash-completion berkdb branding bzip2 cairo caps cli cracklib crypt cxx dbus dri fortran gdbm gif gmp gnome gnome-keyring gstreamer gtk iconv icu ipv6 jpeg jpeg2k mmx mmxext modules multilib ncurses network-cron nls nptl nsplugin numa opengl openmp pam pcre pgo png pulseaudio qt3support raw readline session smp sse sse2 sse2_4way sse2check sse3 sse4 sse41 sse4_1 sse4_2 sse4a ssl ssse3 startup-notification systemd tcpd threads tiff truetype unicode vaapi vdpau xattr xinerama zlib" ABI_X86="64" ALSA_CARDS="hda-intel" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="adc65 agfa_cl20 aox ax203 barbie canon casio_qv clicksmart310 digigr8 digita dimagev dimera3500 directory enigma13 fuji gsmart300 hp215 iclick jamcam jd11 jl2005a jl2005c kodak_dc120 kodak_dc210 kodak_dc240 kodak_dc3200 kodak_ez200 konica konica_qm150 largan lg_gsm mars mustek panasonic_coolshot panasonic_dc1000 panasonic_dc1580 panasonic_l859 pccam300 pccam600 pentax polaroid_pdc320 polaroid_pdc640 polaroid_pdc700 ptp2 ricoh ricoh_g3 samsung sierra sipix_blink2 sipix_web2 smal sonix sony_dscf1 sony_dscf55 soundvision spca50x sq905 st2205 stv0674 stv0680 sx330z topfield toshiba_pdrm11 tp6801" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" DRACUT_MODULES="plymouth" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer pdfimport scripting-javascript wiki-publisher nlpsolver" LINGUAS="en" NGINX_MODULES_HTTP="access auth_basic autoindex browser charset empty_gif fastcgi geo gzip limit_conn limit_req map memcached proxy referer rewrite scgi split_clients ssi upstream_ip_hash userid uwsgi stub_status" OFFICE_IMPLEMENTATION="libreoffice" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3 python3_4 pypy pypy3" QEMU_SOFTMMU_TARGETS="i386 x86_64 arm armeb" QEMU_USER_TARGETS="i386 x86_64 arm armeb" RUBY_TARGETS="ruby19 ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="nvidia nouveau" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" USE_PYTHON="2.7 3.3" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND ================================================================= Package Settings ================================================================= sci-physics/root-6.00.02::science was built with the following: USE="X math opengl openmp ssl -afs -avahi -doc -emacs -examples -fftw -fits -geocad -graphviz -http -kerberos -ldap -minimal -mpi -mysql -odbc -oracle -postgres (-prefix) -pythia6 -pythia8 -python -qt4 -sqlite -xinetd -xml -xrootd" ABI_X86="64" PYTHON_TARGETS="python2_7"
Created attachment 402724 [details] build.log
I have the same error.
Ah, very nasty issue. In comes from the need to regenerate ROOT dictionary (pch header) after root was installed, because there is no way to generate it properly before installation. Though I'm not sure what to do here... The easiest way to do this is to to generate proper PCH header after ROOT was installed live, in pkg_postinst() phase, but this is madness to compile code in this phase, as any scripting error may ruin entire system. Another approach is to add a different package in PDEPEND to generate PCH header. A proper way to fix this will be to set all temporary paths for the script, but too many things are hardcoded to do this cleanly. E.g. we have to separate root-docs mainly due to the very same reason: it needs root installed live. So all three solutions are just nasty. Anyway fixing this will take some sufficient time, be patient (or provide patches :)).
Hi Andrew, I am a bit confused. Is there a way to build root-6 for the moment? If not, why is it not masked?
(In reply to Benda Xu from comment #4) > Hi Andrew, I am a bit confused. Is there a way to build root-6 for the > moment? If not, why is it not masked? It is, on this system it worked: Portage 2.2.18 (python 2.7.9-final-0, default/linux/amd64/13.0, gcc-4.9.2-asneeded, glibc-2.20-r2, 4.0.2-lh x86_64) ================================================================= System Settings ================================================================= System uname: Linux-4.0.2-lh-x86_64-Intel-R-_Core-TM-_i7-2600_CPU_@_3.40GHz-with-gentoo-2.2 KiB Mem: 16399524 total, 177344 free KiB Swap: 8388600 total, 8388600 free Timestamp of repository gentoo: Wed, 13 May 2015 06:15:01 +0000 sh bash 4.3_p33-r2 ld GNU gold (Gentoo 2.25 p1.0 2.25) 1.11 ccache version 3.2.2 [enabled] app-shells/bash: 4.3_p33-r2::gentoo dev-java/java-config: 2.2.0::gentoo dev-lang/perl: 5.20.2-r1::gentoo dev-lang/python: 2.7.9-r2::gentoo, 3.3.5-r1::gentoo, 3.4.3::gentoo dev-util/ccache: 3.2.2::gentoo dev-util/cmake: 3.2.2::gentoo dev-util/pkgconfig: 0.28-r2::gentoo sys-apps/baselayout: 2.2::gentoo sys-apps/openrc: 0.16::gentoo sys-apps/sandbox: 2.6-r1::gentoo sys-devel/autoconf: 2.13::gentoo, 2.69-r1::gentoo sys-devel/automake: 1.11.6-r1::gentoo, 1.12.6::gentoo, 1.14.1::gentoo, 1.15::gentoo sys-devel/binutils: 2.25::gentoo sys-devel/gcc: 4.1.2::gentoo, 4.9.2::gentoo sys-devel/gcc-config: 1.8::gentoo sys-devel/libtool: 2.4.6-r1::gentoo sys-devel/make: 4.1-r1::gentoo sys-kernel/linux-headers: 4.0::gentoo (virtual/os-headers) sys-libs/glibc: 2.20-r2::gentoo Repositories: gentoo location: /var/db/gentoo sync-type: git sync-uri: https://github.com/gentoo/gentoo-portage-rsync-mirror.git priority: -1000 betagarden location: /local/src/repos/betagarden sync-type: git sync-uri: https://anongit.gentoo.org/git/proj/betagarden.git masters: gentoo priority: 50 dummy location: /local/src/repos/dummy masters: gentoo priority: 50 last-hope location: /local/src/repos/last-hope sync-type: git sync-uri: git://github.com/ercpe/lh-overlay.git masters: gentoo priority: 50 science location: /local/src/repos/science sync-type: git sync-uri: git://github.com/gentoo-science/sci.git masters: gentoo priority: 50 gentoo-cvs location: /local/home/justin/tree masters: gentoo priority: 1000 ACCEPT_KEYWORDS="amd64 ~amd64" ACCEPT_LICENSE="*" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-O2 -pipe -ftracer -march=native -frecord-gcc-switches -g -fdiagnostics-color=always -Wimplicit-function-declaration -Wformat-security" CHOST="x86_64-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/lib64/libreoffice/program/sofficerc /usr/share/gnupg/qualified.txt /var/lib/hsqldb /var/spool/munin-async/.ssh /var/spool/torque" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo" CXXFLAGS="-O2 -pipe -ftracer -march=native -frecord-gcc-switches -g -fdiagnostics-color=always -Wenum-compare -Wformat-security" DISTDIR="/var/cache/distfiles" EMERGE_DEFAULT_OPTS=" -vt --keep-going --autounmask-write --autounmask --quiet-build=n --autounmask-unrestricted-atoms=y" FCFLAGS="-O2 -pipe -ftracer -march=native -frecord-gcc-switches -g -fdiagnostics-color=always" FEATURES="assume-digests binpkg-logs buildsyspkg ccache cgroup collision-protect compressdebug distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync multilib-strict network-sandbox news noinfo parallel-fetch parallel-install preserve-libs protect-owned sandbox sfperms sign split-log splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FFLAGS="-O2 -pipe -ftracer -march=native -frecord-gcc-switches -g -fdiagnostics-color=always" GENTOO_MIRRORS=" /mnt/tmpfs/ http://gentoo.j-schmitz.net/mirror/ ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo ftp://ftp.tu-clausthal.de/pub/linux/gentoo/" LANG="en_GB.utf8" LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,-O1 -Wl,--hash-style=gnu -Wl,--sort-common" MAKEOPTS="-j12 -l8" PKGDIR="/var/cache/packages" PORTAGE_COMPRESS="xz" PORTAGE_COMPRESS_FLAGS="-z -e -9 -v --threads=4" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_EXTRA_OPTS="--omit-dir-times" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" USE="X acl alsa amd64 avx bash-completion berkdb branding bzip2 cairo caps cli cracklib crypt cups cxx dbus dri fortran gdbm gif gmp gstreamer gtk gtk3 iconv icu ipv6 jpeg jpeg2k ldap logrotate mmx mmxext modules multilib ncurses network-cron nls nptl nsplugin numa opengl openmp pam pcre pgo png pulseaudio qt3support readline session smp sse sse2 sse2_4way sse2check sse3 sse4 sse41 sse4_1 sse4_2 sse4a sse5 ssl ssse3 startup-notification tcpd threads tiff truetype unicode vaapi vdpau xattr xinerama zlib" ABI_X86="64" ALSA_CARDS="hda-intel" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" DRACUT_MODULES="plymouth" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-32 efi-64" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer pdfimport scripting-javascript wiki-publisher nlpsolver" LINGUAS="en en_GB en_US" NGINX_MODULES_HTTP="access auth_basic autoindex browser charset empty_gif fastcgi geo gzip limit_conn limit_req map memcached proxy referer rewrite scgi split_clients ssi upstream_ip_hash userid uwsgi stub_status" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3 python3_4 pypy" QEMU_SOFTMMU_TARGETS="i386 x86_64 arm armeb" QEMU_USER_TARGETS="i386 x86_64 arm armeb" RUBY_TARGETS="ruby20" USERLAND="GNU" VIDEO_CARDS="nvidia" XFCE_PLUGINS="clock trash power" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" USE_PYTHON="2.7 3.3" Unset: CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND ================================================================= Package Settings ================================================================= sci-physics/root-6.02.05-r2::gentoo was built with the following: USE="X ldap math memstat opengl openmp ssl tiff -afs -avahi -doc -emacs -examples -fftw -fits -gdml -geocad -graphviz -http -kerberos -mpi -mysql -odbc -oracle -postgres (-prefix) -pythia6 -pythia8 -python -qt4 -shadow -sqlite -table -xinetd -xml -xrootd" ABI_X86="64" PYTHON_TARGETS="python2_7"
Hi, I disabled PCH dictionary regeneration for now until problem with hardcoded paths will be solved. This way ROOT will build, install and work fine, but it some corner cases users will encounter issues with invalid root class dictionaries. No version bump here since build-time issue is resolved.
