WARNING: One or more updates/rebuilds have been skipped due to a dependency conflict: dev-python/numpy:0 (dev-python/numpy-1.9.0-r1:0/0::gentoo, ebuild scheduled for merge) conflicts with <dev-python/numpy-1.9.0[python_targets_python2_7(-),python_targets_python3_3(-),-python_single_target_python2_7(-),-python_single_target_python3_3(-)] required by (dev-python/matplotlib-1.3.0:0/0::gentoo, installed) emerge --info Portage 2.2.14 (python 2.7.9-final-0, hardened/linux/amd64, gcc-4.8.3, glibc-2.19-r1, 3.15.5-pentoo x86_64) ================================================================= System uname: Linux-3.15.5-pentoo-x86_64-Intel-R-_Core-TM-_i5-3320M_CPU_@_2.60GHz-with-gentoo-2.2 KiB Mem: 7983424 total, 1505196 free KiB Swap: 4194300 total, 4176996 free Timestamp of tree: Mon, 29 Dec 2014 00:45:01 +0000 ld GNU ld (Gentoo 2.24 p1.4) 2.24 app-shells/bash: 4.2_p53 dev-java/java-config: 2.2.0 dev-lang/perl: 5.18.2-r2 dev-lang/python: 2.7.9-r1, 3.3.5-r1, 3.4.1 dev-util/cmake: 2.8.12.2-r1 dev-util/pkgconfig: 0.28-r1 sys-apps/baselayout: 2.2 sys-apps/openrc: 0.12.4::pentoo sys-apps/sandbox: 2.6-r1 sys-devel/autoconf: 2.69 sys-devel/automake: 1.13.4 sys-devel/binutils: 2.24-r3 sys-devel/gcc: 4.8.3 sys-devel/gcc-config: 1.7.3 sys-devel/libtool: 2.4.2-r1 sys-devel/make: 4.0-r1 sys-kernel/linux-headers: 3.16 (virtual/os-headers) sys-libs/glibc: 2.19-r1 Repositories: gentoo location: /usr/portage sync-type: rsync sync-uri: rsync://rsync.jp.gentoo.org/gentoo-portage/ priority: -1000 pentoo location: /var/lib/layman/pentoo masters: gentoo priority: 0 steam-overlay location: /var/lib/layman/steam masters: gentoo priority: 1 local-overlay location: /usr/local/portage masters: gentoo priority: 2 ABI="amd64" ABI_X86="64" ACCEPT_KEYWORDS="amd64" ACCEPT_LICENSE="* -@EULA PUEL AdobeFlash-11.x Google-TOS dlj-1.1 google-chrome Oracle-BCLA-JavaSE Intel-SDP skype-4.0.0.7-copyright" ACCEPT_PROPERTIES="*" ACCEPT_RESTRICT="*" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ANDROID_HOME="/opt/android-sdk-update-manager" ANDROID_SWT="/usr/share/swt-3.7/lib" ANT_HOME="/usr/share/ant" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ARCH="amd64" AUTOCLEAN="yes" BOOTSTRAP_USE="cxx unicode internal-glib python_targets_python3_3 python_targets_python2_7 multilib hardened pax_kernel pic xtpax -jit -orc" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" CBUILD="x86_64-pc-linux-gnu" CFLAGS="-march=native -O2 -pipe" CFLAGS_amd64="-m64" CFLAGS_x32="-mx32" CFLAGS_x86="-m32" CHOST="x86_64-pc-linux-gnu" CHOST_amd64="x86_64-pc-linux-gnu" CHOST_x32="x86_64-pc-linux-gnux32" CHOST_x86="i686-pc-linux-gnu" CLEAN_DELAY="5" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" COLLISION_IGNORE="/lib/modules/* *.py[co] *$py.class */dropin.cache" CONFIG_PROTECT="/etc /opt/sonar/conf /usr/share/config /usr/share/gnupg/qualified.txt" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-march=native -O2 -pipe" DEFAULT_ABI="amd64" DISPLAY=":0" DISTDIR="/usr/portage/distfiles" EDITOR="/usr/bin/mcedit" ELIBC="glibc" EMERGE_DEFAULT_OPTS=" --ask-enter-invalid --keep-going=y --binpkg-respect-use=y --tree --verbose --with-bdeps=y --buildpkg-exclude "sys-kernel/compat-drivers sys-kernel/ax88179_178a x11-drivers/ati-drivers x11-drivers/nvidia-drivers sys-fs/zfs-kmod sys-kernel/spl sys-power/bbswitch app-emulation/virtualbox-modules app-emulation/vmware-modules app-emulation/open-vm-tools-kmod" --usepkg-exclude "sys-kernel/compat-drivers sys-kernel/ax88179_178a x11-drivers/ati-drivers x11-drivers/nvidia-drivers sys-fs/zfs-kmod sys-kernel/spl sys-power/bbswitch app-emulation/virtualbox-modules app-emulation/vmware-modules app-emulation/open-vm-tools-kmod"" EMERGE_WARNING_DELAY="10" EPREFIX="" EROOT="/" ES_BASHCOMP_DIRS="/usr/share/bash-completion/completions" FCFLAGS="-O2 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr" FETCHCOMMAND="wget -t 3 -T 60 --passive-ftp -O "${DISTDIR}/${FILE}" "${URI}"" FETCHCOMMAND_RSYNC="rsync -avP "${URI}" "${DISTDIR}/${FILE}"" FETCHCOMMAND_SFTP="bash -c "x=\${2#sftp://} ; host=\${x%%/*} ; port=\${host##*:} ; host=\${host%:*} ; [[ \${host} = \${port} ]] && port=22 ; eval \"declare -a ssh_opts=(\${3})\" ; exec sftp -P \${port} \"\${ssh_opts[@]}\" \"\${host}:/\${x#*/}\" \"\$1\"" sftp "${DISTDIR}/${FILE}" "${URI}" "${PORTAGE_SSH_OPTS}"" FETCHCOMMAND_SSH="bash -c "x=\${2#ssh://} ; host=\${x%%/*} ; port=\${host##*:} ; host=\${host%:*} ; [[ \${host} = \${port} ]] && port=22 ; exec rsync --rsh=\"ssh -p\${port} \${3}\" -avP \"\${host}:/\${x#*/}\" \"\$1\"" rsync "${DISTDIR}/${FILE}" "${URI}" "${PORTAGE_SSH_OPTS}"" FFLAGS="-O2 -pipe" FLTK_DOCDIR="/usr/share/doc/fltk-1.3.2/html" GCC_SPECS="" GENTOO_MIRRORS="http://gentoo.channelx.biz" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" GRUB_PLATFORMS="efi-64 pc" GSETTINGS_BACKEND="gconf" HG="/usr/bin/hg" HOME="/root" INFOPATH="/usr/share/info:/usr/share/gcc-data/x86_64-pc-linux-gnu/4.8.3/info:/usr/share/binutils-data/x86_64-pc-linux-gnu/2.24/info" INPUT_DEVICES="evdev keyboard mouse synaptics" INSTALL_MASK="*.la" IUSE_IMPLICIT="abi_x86_64 prefix prefix-guest" JAVAC="/etc/java-config-2/current-system-vm/bin/javac" JAVA_HOME="/etc/java-config-2/current-system-vm" JDK_HOME="/etc/java-config-2/current-system-vm" KERNEL="linux"
This may be related: [nomerge ] dev-python/pyqwt-5.2.0-r1:5 USE="svg -debug -doc -examples" PYTHON_TARGETS="python2_7" [ebuild N ] dev-python/numpy-1.8.0-r1 USE="lapack -doc {-test}" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 0 KiB pyqwt does not pull the latest stable 1.9.0-r1
Somebody modified the stable dev-python/pyqwt build without bumping it. The troublesome line seems the following: -PYTHON_COMPAT=( python{2_6,2_7} ) +PYTHON_COMPAT=( python2_7 ) I had to re-emerge using "-1 dev-python/pyqwt" and that fixed the problem. Please bump the package properly (i.e. -r2)
actually, emerge -DNu world is pulling 1.8.0 back: [nomerge ] net-wireless/gr-osmosdr-0.1.4:0/0.1.4 USE="bladerf fcd hackrf iqbalance python rtlsdr uhd (-mirisdr)" PYTHON_TARGETS="python2_7" [nomerge ] net-wireless/gnuradio-3.7.5.1:0/3.7.5.1 USE="alsa analog audio channels ctrlport digital fcd fec filter grc noaa qt4 sdl trellis uhd utils wavelet wxwidgets -atsc -doc -dtv -examples -jack -log -oss -pager -performance-counters -portaudio {-test} -vocoder -zeromq" PYTHON_TARGETS="python2_7" [nomerge ] dev-python/pyqwt-5.2.0-r1:5 USE="svg -debug -doc -examples" PYTHON_TARGETS="python2_7" [ebuild UD ] dev-python/numpy-1.8.0-r1 [1.9.0-r1] USE="lapack -doc {-test}" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 0 KiB So I'm not sure what's going on.
what kind of additional info do you need?
I'm still facing the original problem: emerge -DNupv world These are the packages that would be merged, in reverse order: Total: 0 packages, Size of downloads: 0 KiB WARNING: One or more updates/rebuilds have been skipped due to a dependency conflict: dev-python/numpy:0 (dev-python/numpy-1.9.0-r1:0/0::gentoo, ebuild scheduled for merge) conflicts with <dev-python/numpy-1.9.0[python_targets_python2_7(-),python_targets_python3_3(-),-python_single_target_python2_7(-),-python_single_target_python3_3(-)] required by (dev-python/matplotlib-1.3.0:0/0::gentoo, installed) ^ ^^^^^
*** This bug has been marked as a duplicate of bug 530538 ***
