Gentoo Websites Logo
Go to: Gentoo Home Documentation Forums Lists Bugs Planet Store Wiki Get Gentoo!
Bug 533688 - net-analyzer/snortsam-2.70 - snortsam.c:(.text+0x1d84): undefined reference to `pthread_cancel'
Summary: net-analyzer/snortsam-2.70 - snortsam.c:(.text+0x1d84): undefined reference t...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Netmon project
URL:
Whiteboard:
Keywords:
Depends on:
Blocks: 517324
  Show dependency tree
 
Reported: 2014-12-27 16:56 UTC by Agostino Sarubbo
Modified: 2015-03-21 13:29 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
snortsam-2.70:20141227-165428.log (snortsam-2.70:20141227-165428.log,3.35 KB, text/plain)
2014-12-27 16:56 UTC, Agostino Sarubbo
Details

Note You need to log in before you can comment on or make changes to this bug.
Description Agostino Sarubbo gentoo-dev 2014-12-27 16:56:30 UTC
This is an auto-filled bug because this package snortsam.c:(.text+0x1d84): undefined reference to `pthread_cancel'.

Portage 2.2.8-r2 (default/linux/amd64/13.0, gcc-4.8.3, glibc-2.19-r1, 3.2.62-hardened-r1-xxxx-std-ipv6-64 x86_64)
=================================================================
System uname: Linux-3.2.62-hardened-r1-xxxx-std-ipv6-64-x86_64-Intel-R-_Xeon-R-_CPU_E3-1245_V2_@_3.40GHz-with-gentoo-2.2
KiB Mem:    32857344 total,   8932248 free
KiB Swap:          0 total,         0 free
ld ld di GNU (Gentoo 2.24 p1.4) 2.24
app-shells/bash:          4.2_p53
dev-java/java-config:     2.2.0
dev-lang/perl:            5.18.2-r2
dev-lang/python:          2.7.7, 3.3.5-r1, 3.4.1
dev-util/cmake:           2.8.12.2-r1
dev-util/pkgconfig:       0.28-r1
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.12.4
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.11.6, 1.13.4
sys-devel/binutils:       2.24-r3
sys-devel/gcc:            4.8.3
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4.2-r1
sys-devel/make:           4.0-r1
sys-kernel/linux-headers: 3.13 (virtual/os-headers)
sys-libs/glibc:           2.19-r1
Repositories: gentoo x-portage
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -Wformat -Werror=format-security -g0 -O2"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.4/ext-active/ /etc/php/apache2-php5.5/ext-active/ /etc/php/cgi-php5.4/ext-active/ /etc/php/cgi-php5.5/ext-active/ 
/etc/php/cli-php5.4/ext-active/ /etc/php/cli-php5.5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-march=native -Wformat -Werror=format-security -g0 -O2 -Wabi -fabi-version=6"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--with-bdeps y --keep-going y -1"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs collision-protect config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync multilib-strict news parallel-fetch preserve-libs protect-owned sandbox sfperms sign split-log strict unknown-features-warn unmerge-logs 
unmerge-orphans userfetch userpriv usersandbox usersync"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="it_IT.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -Wl,--hash-style=gnu"
MAKEOPTS="-j8"
PKGDIR="/root/.pkg"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="X acl amd64 berkdb bzip2 cairo cli consolekit cracklib crypt cxx dbus dri fortran gdbm gudev hwdb iconv icu ipv6 jpeg minizip mmx modules multilib ncurses nls nptl ogg opengl openmp pam pax_kernel pcre png policykit python qt3support qt4 readline session sse 
sse2 ssl tcpd unicode vorbis zlib" ABI_X86="64" ELIBC="glibc" KERNEL="linux" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="am fil zh af ca cs da de el es et gl hu nb nl pl pt ro ru sk sl sv uk bg cy en eo fo ga he id ku lt lv mk ms nn sw 
tn zu ja zh_TW en_GB pt_BR ko zh_CN ar en_CA fi kk oc sr tr fa wa nds as be bn bn_BD bn_IN en_US es_AR es_CL es_ES es_MX eu fy fy_NL ga_IE gu gu_IN hi hi_IN is ka kn ml mr nn_NO or pa pa_IN pt_PT rm si sq sv_SE ta ta_LK te th vi ast dz km my om sh ug uz 
ca@valencia sr@ijekavian sr@ijekavianlatin sr@latin csb hne mai se es_LA fr_CA zh_HK br la no es_CR et_EE sr_CS bo hsb hy mn sr@Latn lb ne bs tg uz@cyrillic xh be_BY brx ca_XV dgo en_ZA gd kok ks ky lo mni nr ns pap ps rw sa_IN sat sd ss st sw_TZ ti ts ve mt ia 
az me tl ak hy_AM lg nso son ur_PK it fr nb nb_NO hr nan ur tk cs_CZ da_DK de_1901 de_CH en_AU lt_LT pl_PL sa sk_SK th_TH ta_IN tt sco ha mi ven ar_SY el_GR ro_RO ru_RU sl_SI uk_UA vi_VN ar_SY te_IN de_DE es_VE fa_IR fr_FR hu_HU id_ID it_IT ja_JP ka_GE nl_NL 
sr_BA sr_RS ca_ES fi_FI he_IL jv ru_gold yi eu_ES" NGINX_MODULES_HTTP="access auth_basic autoindex browser charset empty_gif fastcgi geo gzip limit_conn limit_req map memcached proxy referer rewrite scgi split_clients ssi upstream_ip_hash userid uwsgi addition 
auth_pam cache_purge dav dav_ext degradation echo fancyindex flv geoip gunzip gzip_static headers_more image_filter lua metrics mp4 naxsi perl push push_stream random_index realip secure_link security slowfs_cache spdy stub_status sub upload_progress 
upstream_check xslt ajp auth_request mogilefs sticky" NGINX_MODULES_MAIL="imap pop3 smtp" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-4 php5-5" PYTHON_SINGLE_TARGET="python2_7 python3_3" PYTHON_TARGETS="python2_7 python3_3" QEMU_USER_TARGETS="aarch64 
alpha arm armeb cris i386 m68k microblaze microblazeel mips mips64 mips64el mipsel mipsn32 mipsn32el or32 ppc ppc64 ppc64abi32 s390x sh4 sh4eb sparc sparc32plus sparc64 unicore32 x86_64" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU"
USE_PYTHON="2.7 3.3"
Comment 1 Agostino Sarubbo gentoo-dev 2014-12-27 16:56:34 UTC
Created attachment 392524 [details]
snortsam-2.70:20141227-165428.log

build log
Comment 2 Toralf Förster gentoo-dev 2015-02-28 20:37:58 UTC
I do get a similar thing here :



>>> Verifying ebuild manifests
>>> Emerging (1 of 1) net-analyzer/snortsam-2.70
>>> Failed to emerge net-analyzer/snortsam-2.70, Log file:
>>>  '/var/log/portage/net-analyzer:snortsam-2.70:20150228-202522.log'
 * Package:    net-analyzer/snortsam-2.70
 * Repository: gentoo
 * Maintainer: netmon@gentoo.org
 * USE:        abi_x86_64 amd64 elibc_glibc kernel_linux userland_GNU
 * FEATURES:   preserve-libs sandbox userpriv usersandbox
 * Applying snortsam-2.70-gentoo.patch ...
 [ ok ]
-------------------------------------------------------------------------------
Building SnortSam (release)
-------------------------------------------------------------------------------
x86_64-pc-linux-gnu-gcc -march=native -O2 -pipe -DLinux -Wl,-O1 -Wl,--as-needed -lpthread snortsam.c twofish.c ssp_ciscoacl.c ssp_cisco_nullroute.c ssp_cisco_nullroute2.c ssp_email.c ssp_forward.c ssp_fwexec.c ssp_fwsam.c ssp_netscreen.c ssp_opsec.c ssp_pix.c ssp_snmp_interface_down.c ssp_wgrd.c ssp_ipchains.c ssp_iptables.c ssp_ebtables.c -Wl,-O1 -Wl,--as-needed -o ../snortsam
snortsam.c: In function ‘reloadhistory’:
snortsam.c:2302:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result]
     { fread(buf,6,1,fp);  /* ...read first 6 bytes and check. */
            ^
ssp_ciscoacl.c: In function ‘CISCOACLBlock’:
ssp_ciscoacl.c:447:7: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets(ace, sizeof(ace) - 1, readfile);
       ^
ssp_ciscoacl.c:557:11: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
      fgets(ace, sizeof(ace) - 1, readftpfile);
           ^
ssp_ciscoacl.c: In function ‘CISCOACLCheck’:
ssp_ciscoacl.c:647:7: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result]
  fgets(ace, sizeof(ace) - 1, readfile);
       ^
ssp_fwexec.c: In function ‘FWExecBlock’:
ssp_fwexec.c:120:8: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result]
  system(cmd);  /* or maybe use spawnlp */
        ^
/var/tmp/portage/net-analyzer/snortsam-2.70/temp/ccUgG2Ba.o: In function `getout.part.4':
snortsam.c:(.text+0x1d84): undefined reference to `pthread_cancel'
/var/tmp/portage/net-analyzer/snortsam-2.70/temp/ccUgG2Ba.o: In function `queuehandler':
snortsam.c:(.text+0x3d00): undefined reference to `pthread_create'
snortsam.c:(.text+0x3dbb): undefined reference to `pthread_create'
collect2: error: ld returned 1 exit status
 * ERROR: net-analyzer/snortsam-2.70::gentoo failed (compile phase):
 *   (no error message)
 * 
 * Call stack:
 *     ebuild.sh, line  93:  Called src_compile
 *   environment, line 2237:  Called die
 * The specific snippet of code:
 *       sh makesnortsam.sh || die
 * 
 * If you need support, post the output of `emerge --info '=net-analyzer/snortsam-2.70::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=net-analyzer/snortsam-2.70::gentoo'`.
 * The complete build log is located at '/var/log/portage/net-analyzer:snortsam-2.70:20150228-202522.log'.
 * The ebuild environment file is located at '/var/tmp/portage/net-analyzer/snortsam-2.70/temp/environment'.
 * Working directory: '/var/tmp/portage/net-analyzer/snortsam-2.70/work/snortsam'
 * S: '/var/tmp/portage/net-analyzer/snortsam-2.70/work/snortsam'


        This is a amd64  unstable  chroot build bot image named amd64-unstable at a hardened host.
        quick search: https://bugs.gentoo.org/buglist.cgi?quicksearch=net-analyzer%2Fsnortsam

        
Portage 2.2.8-r2 (default/linux/amd64/13.0/desktop/kde, gcc-4.8.3, glibc-2.19-r1, 3.18.7-hardened-r1 x86_64)
=================================================================
                        System Settings
=================================================================
System uname: Linux-3.18.7-hardened-r1-x86_64-Intel-R-_Core-TM-_i7-3770_CPU_@_3.40GHz-with-gentoo-2.2
KiB Mem:    16164808 total,   1031936 free
KiB Swap:   16777212 total,  16744920 free
Timestamp of tree: Sat, 28 Feb 2015 12:30:01 +0000
ld GNU ld (Gentoo 2.24 p1.4) 2.24
app-shells/bash:          4.3_p33-r1
dev-lang/perl:            5.20.2
dev-lang/python:          2.7.9-r2, 3.3.5-r1, 3.4.1
dev-util/cmake:           3.1.0
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.12.4
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.9.6-r4, 1.11.6-r1, 1.12.6, 1.13.4
sys-devel/binutils:       2.24-r3
sys-devel/gcc:            4.8.3
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4.6
sys-devel/make:           4.0-r1
sys-kernel/linux-headers: 3.16 (virtual/os-headers)
sys-libs/glibc:           2.19-r1
Repositories: gentoo
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/qpsmtpd/plugins /var/spool/torque /var/yp/Makefile"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/games/angband/edit/ /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--nospinner --tree --quiet-build --quiet  --deep --jobs 1"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fail-clean fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://ftp.uni-erlangen.de/pub/mirrors/gentoo rsync://mirror.netcologne.de/gentoo/ ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gor.bytemark.co.uk/gentoo/ rsync://ftp.snt.utwente.nl/gentoo"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j1"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY=""
USE="X a52 aac acl acpi aes-ni alsa amd64 apache2 avx avx2 berkdb bluetooth branding bzip2 cairo cdda cdr cli consolekit corefonts cracklib crypt cups cxx dbus declarative dnssec doc dri drmkms dts dvd dvdr ecc emboss encode exif extraengine fam ffmpeg firefox flac fontconfig fortran fpm gd gdbm gif glamor gpm gtk gudev gui iconv icu isag jpeg kde kipi lapack lcms libav libnotify libvirtd logrotate macvtap mad mbox minizip mmx mng modules mp3 mp4 mpeg multilib mysql ncurses nls nptl ogg opengl openmp openssl pam pango pax_kernel pcre pdf phonon plasma png policykit ppds python qemu qt3support qt4 readline sdl session spell spice sqlite sse sse2 sse4 sse4_1 sse4_2 ssh-askpass ssl ssse3 startup-notification svg tcpd theora thinkpad threads tiff tk tls truetype udev udisks uml unicode upower usb usbredir uxa v4l v4l2 video vorbis wxwidgets x264 xa xcb xcomposite xinerama xml xmp xscreensaver xv xvfb xvid xvmc zenmap zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CPU_FLAGS_X86="aes avx mmx mmxext popcnt sse sse2 sse3 sse4_1 sse4_2 ssse3" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf  superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby20" USERLAND="GNU" VIDEO_CARDS="fbdev glint intel mach64 mga nouveau nv r128 radeon savage sis tdfx trident vesa via vmware dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, SYNC, USE_PYTHON
Comment 3 Justin Lecher (RETIRED) gentoo-dev 2015-03-21 13:29:03 UTC
+  21 Mar 2015; Justin Lecher <jlec@gentoo.org> files/snortsam-2.70-gentoo.patch,
+  metadata.xml, snortsam-2.50-r1.ebuild, snortsam-2.70.ebuild:
+  Use ecvs_clean; fix linking with as-needed, #533688
+