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Bug 473690 - sys-devel/clang-9999 - clang: error while loading shared libraries: libLLVM-3.4svn.so: cannot open shared object file: No such file or directory
Summary: sys-devel/clang-9999 - clang: error while loading shared libraries: libLLVM-3...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Development (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Bernard Cafarelli
URL:
Whiteboard:
Keywords: REGRESSION
Depends on: 477432
Blocks:
  Show dependency tree
 
Reported: 2013-06-18 12:08 UTC by Marcin Mirosław
Modified: 2013-07-31 22:59 UTC (History)
6 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
emerge --info on my system (emerge.txt,5.32 KB, text/plain)
2013-06-23 13:20 UTC, Georg Rudoy
Details

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Description Marcin Mirosław 2013-06-18 12:08:39 UTC
Today I reemerged llvm-9999 and clang-9999. After that clang doesn't work because can't find shared library.

$ clang
clang: error while loading shared libraries: libLLVM-3.4svn.so: cannot open shared object file: No such file or directory
$ scanelf -n /usr/bin/clang
 TYPE   NEEDED FILE 
ET_EXEC libLLVM-3.4svn.so,libpthread.so.0,libstdc++.so.6,libgcc_s.so.1,libc.so.6 /usr/bin/clang

# equery f llvm | grep libLLVM-3.4svn.so
/usr/lib64/llvm/libLLVM-3.4svn.so

It looks path /usr/lib64/llvm/ should be added to LDPATH.

Reproducible: Always




# emerge --info
Portage 2.1.12.5 (default/linux/amd64/13.0/desktop/kde, gcc-4.8.0, glibc-2.17, 3.9.5-gentoo x86_64)
=================================================================
System uname: Linux-3.9.5-gentoo-x86_64-Intel-R-_Core-TM-2_Duo_CPU_E8400_@_3.00GHz-with-gentoo-2.2
KiB Mem:     3079268 total,    327256 free
KiB Swap:    5828748 total,   5083248 free
Timestamp of tree: Tue, 18 Jun 2013 05:30:01 +0000
ld GNU gold (GNU Binutils 2.23.1) 1.11
ccache version 3.1.9 [enabled]
app-shells/bash:          4.2_p45
dev-java/java-config:     2.2.0
dev-lang/python:          2.7.5, 3.2.5, 3.3.2
dev-util/ccache:          3.1.9
dev-util/cmake:           2.8.11.1
dev-util/pkgconfig:       0.28
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.11.8
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.11.6, 1.12.6, 1.13.2
sys-devel/binutils:       2.23.1
sys-devel/gcc:            4.6.4, 4.7.3, 4.8.0
sys-devel/gcc-config:     1.8
sys-devel/libtool:        2.4.2
sys-devel/make:           3.82-r4
sys-kernel/linux-headers: 3.9 (virtual/os-headers)
sys-libs/glibc:           2.17
Repositories: gentoo sunrise
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA AdobeFlash-11.x PUEL Q3AEULA dlj-1.1 Oracle-BCLA-JavaSE"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -march=native -pipe -fpeel-loops -frename-registers -frecord-gcc-switches -fno-unwind-tables -fno-asynchronous-unwind-tables           -fpredictive-commoning -fweb -ftree-vectorize -floop-interchange -fivopts           -floop-block -floop-strip-mine -fira-loop-pressure -floop-interchange -ftree-loop-linear -Wdisabled-optimization  "
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/polkit-1/actions"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -march=native -pipe -fpeel-loops -frename-registers -frecord-gcc-switches -fno-unwind-tables -fno-asynchronous-unwind-tables           -fpredictive-commoning -fweb -ftree-vectorize -floop-interchange -fivopts           -floop-block -floop-strip-mine -fira-loop-pressure -floop-interchange -ftree-loop-linear -Wdisabled-optimization  "
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="Xfail-clean Xkeepwork Xunmerge-backup assume-digests binpkg-logs ccache collision-protect compressdebug config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LDFLAGS="-Wl,-O1 -Wl,--as-needed -z relro"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_EXTRA_OPTS="-O"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/usr/local/portage/layman/sunrise"
SYNC="rsync://192.168.138.254/gentoo-portage"
USE="X a52 aac acl acpi aio alsa amd64 apm async bash-completion bittorrent branding bzip2 cairo caps cdda cdr chroot cli consolekit crypt cups cxx dbus declarative dmx dri dvd dvdr emboss encode exif fam firefox ftp gif glibc-omitfp gpm graphite gstreamer iconv idn iproute2 ipv6 ithreads jpeg kde kipi laptop lcms libnotify lightning logrotate mad mmap mmx mmxext mng modules mp3 mp4 mpeg mudflap multilib ncurses network-cron nls nptl nsplugin nspluginwrapper objc ogg opengl openmp openssl optimization optimized-qmake pam pango pch pcre pdf phonon plasma png policykit ppds python3 qt3support qt4 readline samba sdl semantic-desktop session sharedmem smp spell sse sse2 sse3 sse4_1 ssl ssse3 startup-notification svg threads threadsafe tiff tools truetype udev udisks unicode upower urandom usb vim vim-pager vim-syntax vorbis wxwidgets x264 xattr xcb xcomposite xinerama xml xscreensaver xv xvid zip zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cgid dav dbd deflate dir env expires ext_filter filter headers include info log_config logio mime mime_magic negotiation rewrite setenvif speling status unique_id usertrack vhost_alias" APACHE2_MPMS="worker" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" DRACUT_MODULES="caps lvm mdraid" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="pl en es es_ES" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-3 php5-4" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2" RUBY_TARGETS="ruby19" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, USE_PYTHON
Comment 1 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2013-06-19 11:50:53 UTC
Hmm, looks like they finally stepped on their own mine. I will re-merge it today and see if I can reproduce it.
Comment 2 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2013-06-19 14:32:29 UTC
I'm afraid I can't reproduce this. Could you try updating it again? Maybe they fixed it in svn already.
Comment 3 Marcin Mirosław 2013-06-19 15:57:09 UTC
I just reemerged llvm&clang again, clang is at 184308, llvm is at 184306. It doesn't solve my problem. Diff beetwen `equery f llvm` old an new is:
diff -u llvm-dotych llvm-new 
--- llvm-dotych 2013-06-19 17:00:09.093222287 +0200
+++ llvm-new    2013-06-19 17:36:06.953614355 +0200
@@ -428,6 +428,7 @@
 /usr/include/llvm/Object/Error.h
 /usr/include/llvm/Object/MachO.h
 /usr/include/llvm/Object/MachOFormat.h
+/usr/include/llvm/Object/MachOUniversal.h
 /usr/include/llvm/Object/ObjectFile.h
 /usr/include/llvm/Object/RelocVisitor.h
 /usr/include/llvm/Object/YAML.h

So libLLVM-3.4svn.so is still in the same place.
# equery f llvm|grep libLLVM-3.4svn.so
/usr/lib64/llvm/libLLVM-3.4svn.so
Comment 4 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2013-06-19 16:03:30 UTC
Well, wasn't libLLVM always there? I was pretty sure about it a minute ago but now I'm in doubt.

In any case, mesa has had issues finding libLLVM for a while already and it seems that clang finally joined it. I had a work-around for it in /etc/ld.so.conf.d/, that's why it worked for me. Sorry for making you rebuild it unnecessarily.

@voyageur, I guess we may take the easy way and install such a work-around in /etc/ld.so.conf.d for now or just start installing LLVM into /usr/lib* like cmake does.
Comment 5 Marcin Mirosław 2013-06-19 16:29:27 UTC
I looked into very old backup (6.11.2012) and I can see:
/usr/lib/llvm/libLLVM-3.2svn.so
I chrooted inside and I did use strace:
# strace -s 800 clang 2>&1|grep libLLVM
open("/usr/lib64/llvm/tls/x86_64/libLLVM-3.2svn.so", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
open("/usr/lib64/llvm/tls/libLLVM-3.2svn.so", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
open("/usr/lib64/llvm/x86_64/libLLVM-3.2svn.so", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
open("/usr/lib64/llvm/libLLVM-3.2svn.so", O_RDONLY|O_CLOEXEC) = 3

It's ok.
Now I;m launching strace on current installation:
# strace -s 800 clang 2>&1|grep libLLVM
open("/usr/bin/../lib/tls/x86_64/libLLVM-3.4svn.so", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
open("/usr/bin/../lib/tls/libLLVM-3.4svn.so", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
open("/usr/bin/../lib/x86_64/libLLVM-3.4svn.so", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
open("/usr/bin/../lib/libLLVM-3.4svn.so", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
open("/lib64/tls/x86_64/libLLVM-3.4svn.so", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
open("/lib64/tls/libLLVM-3.4svn.so", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
open("/lib64/x86_64/libLLVM-3.4svn.so", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
open("/lib64/libLLVM-3.4svn.so", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
open("/usr/lib64/tls/x86_64/libLLVM-3.4svn.so", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
open("/usr/lib64/tls/libLLVM-3.4svn.so", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
open("/usr/lib64/x86_64/libLLVM-3.4svn.so", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
open("/usr/lib64/libLLVM-3.4svn.so", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
writev(2, [{"clang", 5}, {": ", 2}, {"error while loading shared libraries", 36}, {": ", 2}, {"libLLVM-3.4svn.so", 17}, {": ", 2}, {"cannot open shared object file", 30}, {": ", 2}, {"No such file or directory", 25}, {"\n", 1}], 10clang: error while loading shared libraries: libLLVM-3.4svn.so: cannot open shared object file: No such file or directory

Could clang binary had hardcoded paths to shared library?
Comment 6 Marcin Mirosław 2013-06-19 19:58:03 UTC
On diffrent host I have clang/llvm at rev.183607, I'm getting "error while loading shared libraries" also
Comment 7 Bernard Cafarelli gentoo-dev 2013-06-21 08:12:13 UTC
Indeed, since we enabled shared library, libLLVM was always there. Maybe a faulty llvm-config output (or changed since 3.3 release)? I need to test with -9999

3.3 has correct rpath on clang:
% chrpath /usr/bin/clang
/usr/bin/clang: RPATH=$ORIGIN/../lib:/usr/lib64/llvm
Comment 8 Georg Rudoy 2013-06-23 13:18:08 UTC
I can confirm this on clang and llvm emerged just now.
Comment 9 Georg Rudoy 2013-06-23 13:20:07 UTC
Created attachment 351732 [details]
emerge --info on my system
Comment 10 Richard Yao (RETIRED) gentoo-dev 2013-06-26 14:39:34 UTC
I have been affected by this too, but I was not paying too much attention, so I thought that I had built clang in a manner that was out-of-sync with LLVM.

With that said, this sounds like an upstream issue. Someone will need to start building older versions of LLVM and Clang via ESVN_REVISION to find out which upstream change broke this on us.
Comment 11 Marcin Mirosław 2013-06-26 21:12:35 UTC
I can try to find problematic revision.
Comment 12 Marcin Mirosław 2013-06-27 17:43:36 UTC
I checked using such command:  ESVN_REVISION=182559 emerge -qv1 llvm clang

Last working revision: 182558
I did diff beetwen list of files, no difference.
Comment 13 Marcin Mirosław 2013-06-27 17:44:09 UTC
r182559 | rafael | 2013-05-23 04:53:22 +0200 (czw) | 5 linii

Remove redundant rpath.

These are not needed since we added the $ORIGIN based rpath.
Comment 14 Oleg Ageev 2013-07-16 21:03:05 UTC
This is not only clang bug llvm stuff (like llc) too
Comment 15 Oleg Ageev 2013-07-16 21:59:40 UTC
Bug in llvm-9999.ebuild 
in src_prepare
"Fixing rpath and CFLAGS"
have wrong substitute
sed -e "s,\$(RPATH) -Wl\,'\$\$ORIGIN/../lib',\$(RPATH) -Wl\,""${EPREFIX}"/usr/$(get_libdir)/${PN}, \

must fix this bug

but may be better fix all $$ORIGIN
$$ORIGIN it's like 'executable_path' get at runtime
we can replace this, or replace all path which have this

$$ORIGIN/../lib
to
$$ORIGIN/../$(get_libdir)/${PN}
as example
Comment 16 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2013-07-19 08:05:30 UTC
I'm working on it right now. I'll convert all the seds into epatch+sed which should be much safer.
Comment 17 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2013-07-19 11:00:56 UTC
I've replaced all the sed statements with patches in llvm-9999-r1::mgorny. I'll backport it to -3.3-r1::mgorny soon; in the meantime, feel free to test it.

Good news is that it fixes clang. Bad news is that LLVM is still broken. I wonder if RPATH was added to llvm-config somehow implicitly or explicitly.
Comment 18 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2013-07-19 11:01:17 UTC
(In reply to Michał Górny from comment #17)
> Good news is that it fixes clang. Bad news is that LLVM is still broken. I
> wonder if RPATH was added to llvm-config somehow implicitly or explicitly.

Sorry, I meant mesa/vdpau is broken.
Comment 19 Marcin Mirosław 2013-07-19 12:59:53 UTC
I've tried llvm-r1 and it works for me. And it's just one package instead of two, I like it:)
Comment 20 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2013-07-19 13:12:32 UTC
I've backported the patch to 3.3-r1::mgorny as well but =llvm-3.3-r1[clang] fails to build. I have no idea why, I'd appreciate if someone could nail it down. In the meantime, trying to build [-clang].
Comment 21 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2013-07-19 14:30:10 UTC
Ok, 3.3 backport is fixed in ::mgorny now. It seems that 3.3 requires $ORIGIN in rpath to build. I'd like someone to confirm that 9999 doesn't require it and it's not just a coincidence due to svn build.

This involves 3.3 installing files with insecure rpaths but I don't know if it's worth fighting it at the point.
Comment 22 Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2013-07-31 22:59:48 UTC
This should be fixed in -3.3-r1 and -9999.