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Bug 457534 - sys-cluster/torque-2.4.16: mv: cannot stat `libtool': No such file or directory
Summary: sys-cluster/torque-2.4.16: mv: cannot stat `libtool': No such file or directory
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Server (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Justin Bronder (RETIRED)
Depends on:
Reported: 2013-02-14 14:31 UTC by Martin Mokrejš
Modified: 2015-08-05 16:58 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---

config.log (config.log,152.34 KB, text/plain)
2013-02-14 14:31 UTC, Martin Mokrejš
build.log (build.log,47.56 KB, text/plain)
2013-02-14 14:33 UTC, Martin Mokrejš

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Description Martin Mokrejš 2013-02-14 14:31:01 UTC
I see on of my cluster nodes when re-installing torque:

>>> Emerging (1 of 1) sys-cluster/torque-2.4.16
 * torque-2.4.16.tar.gz SHA256 SHA512 WHIRLPOOL size ;-) ...                                                                                                                                                                                                                                                            [ ok ]
>>> Unpacking source...
>>> Unpacking torque-2.4.16.tar.gz to /var/tmp/portage/sys-cluster/torque-2.4.16/work
>>> Source unpacked in /var/tmp/portage/sys-cluster/torque-2.4.16/work
>>> Preparing source in /var/tmp/portage/sys-cluster/torque-2.4.16/work/torque-2.4.16 ...
 * Applying 0002-fix-implicit-declaration-warnings.patch ...                                                                                                                                                                                                                                                            [ ok ]
 * Applying disable-automagic-doc-building-2.4.14.patch ...                                                                                                                                                                                                                                                             [ ok ]
 * Running eautoreconf in '/var/tmp/portage/sys-cluster/torque-2.4.16/work/torque-2.4.16' ...
 * Running libtoolize --install --copy --force --automake ...                                                                                                                                                                                                                                                           [ ok ]
 * Running aclocal ...                                                                                                                                                                                                                                                                                                  [ ok ]
 * Running autoconf ...                                                                                                                                                                                                                                                                                                 [ ok ]
 * Running autoheader ...                                                                                                                                                                                                                                                                                               [ ok ]
 * Running automake --add-missing --copy --foreign ...                                                                                                                                                                                                                                                                  [ ok ]
 * Running elibtoolize in: torque-2.4.16/buildutils/
 *   Applying portage/1.2.0 patch ...
 *   Applying sed/1.5.6 patch ...
 *   Applying as-needed/2.2.6 patch ...
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sys-cluster/torque-2.4.16/work/torque-2.4.16 ...
 * econf: updating torque-2.4.16/buildutils/config.sub with /usr/share/gnuconfig/config.sub
 * econf: updating torque-2.4.16/buildutils/config.guess with /usr/share/gnuconfig/config.guess
./configure --prefix=/usr --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu --mandir=/usr/share/man --infodir=/usr/share/info --datadir=/usr/share --sysconfdir=/etc --localstatedir=/var/lib --libdir=/usr/lib64 --disable-gui --enable-syslog --enable-server --disable-drmaa --with-server-home=/var/spool/torque --with-environ=/etc/pbs_environment --with-default-server=nfssrv.cluster.local --disable-gcc-warnings --disable-cpuset --with-rcp=scp --disable-apidocs
checking build system type... x86_64-pc-linux-gnu


checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
mv: cannot stat `libtool': No such file or directory
./configure: line 12265: libtool: No such file or directory
mv: cannot stat `libtool.old': No such file or directory
checking whether ln -s works... yes
checking for flex... flex
checking lex output file root... lex.yy
checking lex library... -lfl
checking whether yytext is a pointer... yes
checking for bison... bison -y
checking for gtbl... gtbl
checking for gpic... no
checking for pic... pic
checking for groff... groff
checking whether to turn on the compilation of DEBUG code... no
checking whether to compile with debugging symbols... DEBUG_SYMBOLS=no
checking for stat64... yes
checking for open64... yes
checking for lseek64... yes
./configure: line 12713: ac_fn_c_check_member: command not found
checking for struct stat64.st_mode... yes
checking whether to use strict gcc warnings... no
Comment 1 Martin Mokrejš 2013-02-14 14:31:16 UTC
Created attachment 338866 [details]
Comment 2 Martin Mokrejš 2013-02-14 14:33:05 UTC
Created attachment 338868 [details]
Comment 3 Martin Mokrejš 2013-02-14 14:37:43 UTC
$ emerge --info
Portage (default/linux/amd64/13.0, gcc-4.3.6, glibc-2.15-r3, x86_64)
System uname: Linux-
KiB Mem:     3988628 total,   1046048 free
KiB Swap:    7912004 total,   7912004 free
Timestamp of tree: Mon, 11 Feb 2013 09:00:01 +0000
ld GNU ld (GNU Binutils) 2.21.1
distcc 3.1 x86_64-pc-linux-gnu [disabled]
app-shells/bash:          4.2_p37
dev-java/java-config:     2.1.11-r3
dev-lang/python:          2.6.6-r2, 2.7.2-r3, 3.2.2
dev-util/cmake:           2.8.6-r4
dev-util/pkgconfig:       0.28
sys-apps/baselayout:      2.1-r1
sys-apps/openrc:          0.11.8
sys-apps/sandbox:         2.5
sys-devel/autoconf:       2.13, 2.68
sys-devel/automake:       1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.2, 1.11.1
sys-devel/binutils:       2.21.1-r1
sys-devel/gcc:            4.3.6-r1, 4.5.3-r2
sys-devel/gcc-config:     1.5-r2
sys-devel/libtool:        2.4-r1
sys-devel/make:           3.82-r1
sys-kernel/linux-headers: 3.1 (virtual/os-headers)
sys-libs/glibc:           2.15-r3
Repositories: gentoo science x-local
ACCEPT_LICENSE="* -@EULA dlj-1.1 sun-bcla-java-vm Oracle-BCLA-JavaSE Nero-EULA-US skype-eula Intel-SDP"
CFLAGS="-O2 -ggdb -pipe -fno-strict-aliasing -mmmx -msse -msse2 -mssse3 -march=native -mtune=native"
CONFIG_PROTECT="/etc /var/qmail/alias /var/qmail/control /var/spool/torque"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -ggdb -pipe -fno-strict-aliasing -mmmx -msse -msse2 -mssse3 -march=native -mtune=native"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS="-O2 -pipe"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTDIR_OVERLAY="/nfslarge/usr/portage/local/layman/science /nfslarge/usr/portage/local"
USE="R X Xaw3d acl acpi amd64 bash-completion bcmath berkdb blas boost bzip2 cblas cli colordiff compress cpio cracklib crypt cscope css ctype curl curlwrappers cxx dbus djbfft emboss emf encode enscript expat fam fontconfig fortran ftp gcj gd gdbm gif glibc-compat20 glibc-omitfp glut gmp gnuplot gpm graphviz gs gsl gtk gtkhtml hal iconv inifile innodb ithreads java javascript jbig jikes jpeg jpeg2k kdtree lapack lcms libedit libwww lzo lzw maildir mhash mime ming mjpeg mmap mmx mng mod_python modperl modplug modules mpeg mpi mpi-threads mpi_njtree mpich mpich2 mudflap mule multilib mxdatetime mysql ncurses netcdf netpbm network nfsv3 nntp nptl numeric openmp pam pcntl pcre pdf perl plotutils plugin png pnm postproc postscript ppds procmail pymol python rar raw readline rpm rtc scp server session sftp smime sndfile sockets srt sse sse2 sse3 ssl svg svgz sysfs sysvipc tcl tcpd threads tiff transcode truetype unicode urandom userlocales uuencode vim-syntax vim-with-x wmf xanim xfs xinetd xml xorg xpm xslt xv xvid zip zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en cs cz" PHP_TARGETS="php5-3" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2" RUBY_TARGETS="ruby18 ruby19" USERLAND="GNU" VIDEO_CARDS="vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Comment 4 Justin Bronder (RETIRED) gentoo-dev 2015-08-05 16:58:59 UTC
Not reproducible with versions still in the tree.