Bug 456908 – sys-libs/pam-1.1.6-r2: /usr/lib64/portage/bin/isolated-functions.sh: line 215: wait: `Failed Running autopoint !': not a pid or valid job spec - autopoint: *** cvs program not found

• Status: RESOLVED OBSOLETE
• Product: Gentoo Linux

[Description Martin Mokrejš 2013-02-12 10:17:48 UTC]

Hi,
  while updating some cluster nodes I came across this:

 * Package:    sys-libs/pam-1.1.6-r2
 * Repository: gentoo
 * Maintainer: [e-mail]
 * USE:        amd64 berkdb cracklib elibc_glibc kernel_linux userland_GNU vim-syntax
 * FEATURES:   sandbox
>>> Unpacking source...
>>> Unpacking Linux-PAM-1.1.6.tar.bz2 to /var/tmp/portage/sys-libs/pam-1.1.6-r2/work
>>> Unpacking Linux-PAM-1.1.6-docs.tar.bz2 to /var/tmp/portage/sys-libs/pam-1.1.6-r2/work
>>> Source unpacked in /var/tmp/portage/sys-libs/pam-1.1.6-r2/work
>>> Preparing source in /var/tmp/portage/sys-libs/pam-1.1.6-r2/work/Linux-PAM-1.1.6 ...
 * Applying Linux-PAM-1.1.6-destdir.patch ...
 [ ok ]
 * Applying Linux-PAM-1.1.6+glibc-2.16.patch ...
 [ ok ]
 * Running eautoreconf in '/var/tmp/portage/sys-libs/pam-1.1.6-r2/work/Linux-PAM-1.1.6' ...
 * Running autopoint --force ...
 [ !! ]

 * Failed Running autopoint !
 * 
 * Include in your bugreport the contents of:
 * 
 *   /var/tmp/portage/sys-libs/pam-1.1.6-r2/temp/autopoint.out

 * ERROR: sys-libs/pam-1.1.6-r2 failed (prepare phase):
 *   Failed Running autopoint !
 * 
 * Call stack:
 *     ebuild.sh, line   93:  Called src_prepare
 *   environment, line 3608:  Called eautoreconf
 *   environment, line 1103:  Called autotools_run_tool '--at-missing' 'autopoint' '--force'
 *   environment, line  719:  Called die
 * The specific snippet of code:
 *           die "Failed Running $1 !";
 * 
 * If you need support, post the output of `emerge --info '=sys-libs/pam-1.1.6-r2'`,
 * the complete build log and the output of `emerge -pqv '=sys-libs/pam-1.1.6-r2'`.
/usr/lib64/portage/bin/isolated-functions.sh: line 215: wait: `Failed Running autopoint !': not a pid or valid job spec
 * The complete build log is located at '/var/tmp/portage/sys-libs/pam-1.1.6-r2/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/sys-libs/pam-1.1.6-r2/temp/environment'.
 * Working directory: '/var/tmp/portage/sys-libs/pam-1.1.6-r2/work/Linux-PAM-1.1.6'
 * S: '/var/tmp/portage/sys-libs/pam-1.1.6-r2/work/Linux-PAM-1.1.6'


Portage 2.1.11.50 (default/linux/amd64/13.0, gcc-4.3.6, glibc-2.13-r4, 2.6.32.58-default x86_64)
=================================================================
System uname: Linux-2.6.32.58-default-x86_64-Intel-R-_Core-TM-2_Quad_CPU_Q6600_@_2.40GHz-with-gentoo-2.1
KiB Mem:     3988628 total,     86132 free
KiB Swap:    7912004 total,   7907060 free
Timestamp of tree: Mon, 11 Feb 2013 09:00:01 +0000
ld GNU ld (GNU Binutils) 2.21.1
distcc 3.1 x86_64-pc-linux-gnu [disabled]
app-shells/bash:          4.2_p37
dev-java/java-config:     2.1.11-r3
dev-lang/python:          2.6.6-r2, 2.7.2-r3, 3.2.2
dev-util/cmake:           2.8.6-r4
dev-util/pkgconfig:       0.28
sys-apps/baselayout:      2.1-r1
sys-apps/openrc:          0.11.8
sys-apps/sandbox:         2.5
sys-devel/autoconf:       2.13, 2.68
sys-devel/automake:       1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.2, 1.11.1
sys-devel/binutils:       2.21.1-r1
sys-devel/gcc:            4.3.6-r1, 4.5.3-r2
sys-devel/gcc-config:     1.5-r2
sys-devel/libtool:        2.4-r1
sys-devel/make:           3.82-r1
sys-kernel/linux-headers: 3.1 (virtual/os-headers)
sys-libs/glibc:           2.13-r4
Repositories: gentoo science x-local
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA dlj-1.1 sun-bcla-java-vm Oracle-BCLA-JavaSE Nero-EULA-US skype-eula Intel-SDP"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -ggdb -pipe -fno-strict-aliasing -mmmx -msse -msse2 -mssse3 -march=native -mtune=native"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/openvpn/easy-rsa /var/qmail/alias /var/qmail/control /var/spool/torque"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -ggdb -pipe -fno-strict-aliasing -mmmx -msse -msse2 -mssse3 -march=native -mtune=native"
DISTDIR="/nfslarge/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://gentoo.mirror.web4u.cz/"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j1"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/nfslarge/usr/portage"
PORTDIR_OVERLAY="/nfslarge/usr/portage/local/layman/science /nfslarge/usr/portage/local"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="R X Xaw3d acl acpi amd64 bash-completion bcmath berkdb blas boost bzip2 cblas cli colordiff compress cpio cracklib crypt cscope css ctype curl curlwrappers cxx dbus djbfft emboss emf encode enscript expat fam fontconfig fortran ftp gcj gd gdbm gif glibc-compat20 glibc-omitfp glut gmp gnuplot gpm graphviz gs gsl gtk gtkhtml hal iconv inifile innodb ithreads java javascript jbig jikes jpeg jpeg2k kdtree lapack lcms libedit libwww lzo lzw maildir mhash mime ming mjpeg mmap mmx mng mod_python modperl modplug modules mpeg mpi mpi-threads mpi_njtree mpich mpich2 mudflap mule multilib mxdatetime mysql ncurses netcdf netpbm network nfsv3 nntp nptl numeric openmp pam pcntl pcre pdf perl plotutils plugin png pnm postproc postscript ppds procmail pymol python rar raw readline rpm rtc scp server session sftp smime sndfile sockets srt sse sse2 sse3 ssl svg svgz sysfs sysvipc tcl tcpd threads tiff transcode truetype unicode urandom userlocales uuencode vim-syntax vim-with-x wmf xanim xfs xinetd xml xorg xpm xslt xv xvid zip zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en cs cz" PHP_TARGETS="php5-3" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2" RUBY_TARGETS="ruby18 ruby19" USERLAND="GNU" VIDEO_CARDS="vesa" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LANG, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON

[Comment 1 Martin Mokrejš 2013-02-12 10:20:31 UTC]

# ls -latr /var/tmp/portage/sys-libs/pam-1.1.6-r2/work/Linux-PAM-1.1.6/
total 1160
-rw-r--r--  1 root    root      7583 Aug 15 13:08 pgp.keys.asc
-rw-r--r--  1 root    root      1636 Aug 15 13:08 README
-rw-r--r--  1 root    root      1216 Aug 15 13:08 Makefile.am
-rw-r--r--  1 root    root      1128 Aug 15 13:08 Make.xml.rules
-rw-r--r--  1 root    root      2045 Aug 15 13:08 Copyright
-rw-r--r--  1 root    root    179576 Aug 15 13:08 ChangeLog-CVS
-rw-r--r--  1 root    root      2045 Aug 15 13:08 COPYING
-rw-r--r--  1 root    root     81314 Aug 15 13:08 CHANGELOG
-rw-r--r--  1 root    root       230 Aug 15 13:08 AUTHORS
-rw-r--r--  1 root    root     80541 Aug 15 13:14 ABOUT-NLS
-rw-r--r--  1 root    root     15578 Aug 17 10:47 INSTALL
-rw-r--r--  1 root    root     19489 Aug 17 10:48 configure.in
-rw-r--r--  1 root    root     42216 Aug 17 10:51 aclocal.m4
-rwxr-xr-x  1 root    root    573424 Aug 17 10:51 configure
-rw-r--r--  1 root    root     26117 Aug 17 10:51 Makefile.in
-rw-r--r--  1 root    root     11804 Aug 17 10:51 config.h.in
-rw-r--r--  1 root    root      8918 Aug 17 11:47 NEWS
drwxr-xr-x  2 root    root      4096 Aug 17 11:50 tests
drwxr-xr-x 46 root    root      4096 Aug 17 11:50 modules
drwxr-xr-x  2 root    root      4096 Aug 17 11:50 m4
drwxr-xr-x  4 root    root      4096 Aug 17 11:50 libpamc
drwxr-xr-x  3 root    root      4096 Aug 17 11:50 libpam_misc
drwxr-xr-x  3 root    root      4096 Aug 17 11:50 libpam
drwxr-xr-x  2 root    root      4096 Aug 17 11:50 build-aux
drwxr-xr-x  2 root    root      4096 Aug 17 11:50 xtests
drwxr-xr-x  2 root    root      4096 Aug 17 11:50 po
drwxr-xr-x  2 root    root      4096 Aug 17 11:50 examples
drwxr-xr-x  3 root    root      4096 Aug 17 11:50 conf
-rw-r--r--  1 root    root     20246 Aug 17 11:50 ChangeLog
drwxr-xr-x  7 root    root      4096 Aug 17 11:56 doc
drwx------  3 portage portage   4096 Feb 12 10:48 ..
drwxr-xr-x  2 root    root      4096 Feb 12 10:48 autom4te.cache
-rw-r--r--  1 root    root       276 Feb 12 10:48 .__autoconf_trace_data
drwxr-xr-x 15 root    root      4096 Feb 12 10:48 .
#
# cat /var/tmp/portage/sys-libs/pam-1.1.6-r2/work/Linux-PAM-1.1.6/.__autoconf_trace_data
configure.in:4:AC_CONFIG_AUX_DIR:build-aux
configure.in:5:AM_INIT_AUTOMAKE:"Linux-PAM":1.1.6
configure.in:7:AC_CONFIG_HEADERS:config.h
configure.in:8:AC_CONFIG_MACRO_DIR:m4
configure.in:85:AC_PROG_LIBTOOL:
configure.in:85:LT_INIT:
configure.in:564:AM_GNU_GETTEXT_VERSION:0.15
#

[Comment 2 Diego Elio Pettenò (RETIRED) 2013-02-12 15:40:09 UTC]

Please attach /var/tmp/portage/sys-libs/pam-1.1.6-r2/temp/autopoint.out as otherwise we have no idea what's going on...

[Comment 3 Martin Mokrejš 2013-02-12 18:04:26 UTC]

# cat /var/tmp/portage/sys-libs/pam-1.1.6-r2/temp/autopoint.out
***** autopoint *****
***** PWD: /var/tmp/portage/sys-libs/pam-1.1.6-r2/work/Linux-PAM-1.1.6
***** autopoint --force

autopoint: *** cvs program not found
autopoint: *** Stop.
#

Indeed, I don't have dev-vcs/cvs installed there.

[Comment 4 Tom Wijsman (TomWij) (RETIRED) 2013-02-16 21:10:14 UTC]

Sounds like a missing dependency.

[Comment 5 PetaMem R&D 2013-04-21 15:28:29 UTC]

Same problem here, after emerging gettext to 0.18.2 problem went away.

[Comment 6 Matt Turner 2013-07-12 04:29:28 UTC]

I just hit this as well when building pam-1.1.6-r2 against gettext 0.17-r1.

Looks like it needs some newer version.

[Comment 7 Matt Turner 2013-07-12 04:32:10 UTC]

(In reply to Matt Turner from comment #6)
> I just hit this as well when building pam-1.1.6-r2 against gettext 0.17-r1.
> 
> Looks like it needs some newer version.

The version of gettext I have installed has USE="openmp -acl -doc -emacs -nls -nocxx"

so, it has no git or cvs USE flags. Maybe pam should depend on gettext[cvs] or gettext[git]?

[Comment 8 Matt Turner 2014-02-01 06:06:26 UTC]

Well, no progress and not much chance of progress. gettext-0.17 is out if the tree since Nov 2011, so.