Created attachment 336462 [details] /var/tmp/portage/app-doc/root-docs-5.34.03/temp/build.log 'emerge root-docs' fails with: ... Running /var/tmp/portage_standard/app-doc/root-docs-5.34.03/work/root/build/unix/compiledata.sh Making include/compiledata.h Generating README/ReleaseNotes from package docs... Generated README/ReleaseNotes/v534/index.html Check the generated file with: http://validator.w3.org/#validate_by_upload+with_options Welcome to the ROOT tutorials Type ".x demos.C" to get a toolbar from which to execute the demos Type ".x demoshelp.C" to see the help window ==> Many tutorials use the file hsimple.root produced by hsimple.C ==> It is recommended to execute hsimple.C before any other script Processing hsimple.C... Warning in <TClass::TClass>: no dictionary for class TFile is available hsimple : Real Time = 0.23 seconds Cpu Time = 0.23 seconds (class TFile*)0x8f13078 This is the end of ROOT -- Goodbye Processing cernbuild.C... Error: Function Open(filename,"RECREATE") is not defined in current scope cernbuild.C:51: *** Interpreter error recovered *** make: *** [html] Error 1 root@thinkpad:/usr/local/portage/sci-visualization(181)# emerge --info '=app-doc/root-docs-5.34.03' Portage 2.1.11.46 (default/linux/x86/10.0/desktop, gcc-4.5.4, glibc-2.16.0, 3.4.4-gentoo i686) ================================================================= System Settings ================================================================= System uname: Linux-3.4.4-gentoo-i686-Intel-R-_Pentium-R-_M_processor_2.00GHz-with-gentoo-2.2 KiB Mem: 2072560 total, 403384 free KiB Swap: 6016304 total, 5961296 free Timestamp of tree: Sun, 20 Jan 2013 06:00:01 +0000 ld GNU ld (GNU Binutils) 2.23.1 app-shells/bash: 4.2_p42 dev-java/java-config: 2.1.12-r1 dev-lang/python: 2.7.3-r3, 3.2.3-r2 dev-util/cmake: 2.8.10.2-r1 dev-util/pkgconfig: 0.27.1 sys-apps/baselayout: 2.2 sys-apps/openrc: 0.11.8 sys-apps/sandbox: 2.6 sys-devel/autoconf: 2.13, 2.69 sys-devel/automake: 1.9.6-r3, 1.10.3, 1.11.6, 1.12.6, 1.13.1 sys-devel/binutils: 2.23.1 sys-devel/gcc: 4.5.4 sys-devel/gcc-config: 1.8 sys-devel/libtool: 2.4.2 sys-devel/make: 3.82-r4 sys-kernel/linux-headers: 3.7 (virtual/os-headers) sys-libs/glibc: 2.16.0 Repositories: gentoo arcon lordvan science x11 sunrise java-overlay lisp local x-cpan g-octave Installed sets: @system ACCEPT_KEYWORDS="x86 ~x86" ACCEPT_LICENSE="* -@EULA PUEL Intel-SDP dlj-1.1 skype-eula skype-4.0.0.7-copyright googleearth AdobeFlash-10.3 cadsoft Oracle-BCLA-JavaSE MakeMKV-EULA" CBUILD="i686-pc-linux-gnu" CFLAGS="-O2 -march=pentium-m -fomit-frame-pointer" CHOST="i686-pc-linux-gnu" CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt /usr/share/openvpn/easy-rsa /usr/share/polkit-1/actions /var/lib/hsqldb" CONFIG_PROTECT_MASK="${EPREFIX}/etc/gconf /etc/ca-certificates.conf /etc/dconf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5.3/ext-active/ /etc/php/apache2-php5.4/ext-active/ /etc/php/cgi-php5.3/ext-active/ /etc/php/cgi-php5.4/ext-active/ /etc/php/cli-php5.3/ext-active/ /etc/php/cli-php5.4/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c" CXXFLAGS="-O2 -march=pentium-m -fomit-frame-pointer" DISTDIR="/usr/portage/distfiles" FCFLAGS="-O2 -march=i686 -pipe" FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch xattr" FFLAGS="-O2 -march=pentium-m -fomit-frame-pointer" GENTOO_MIRRORS="http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror http://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/ ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo ftp://sunsite.informatik.rwth-aachen.de/pub/Linux/gentoo ftp://ftp.tu-clausthal.de/pub/linux/gentoo ftp://ftp.easynet.nl/mirror/gentoo/ " LANG="en_US.UTF-8" LDFLAGS="-Wl,-O1 -Wl,--as-needed" MAKEOPTS="-j1" PKGDIR="/usr/portage/packages/" PORTAGE_CONFIGROOT="/" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_TMPDIR="/var/tmp" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/var/lib/layman/arcon /var/lib/layman/lordvan /var/lib/layman/science /var/lib/layman/x11 /var/lib/layman/sunrise /var/lib/layman/java-overlay /var/lib/layman/lisp /usr/local/portage /var/lib/cpan /var/lib/g-octave" SYNC="rsync://rsync.gentoo.org/gentoo-portage" USE="R X Xaw3d a52 aac accessibility acl acpi admin afs alsa ao apache2 apng applet archive arpack asf aspell assistant atlas audacious audiofile automap automount bash-completion berkdb blas blast bluetooth boo boost branding bzip2 cairo cdda cddb cdf cdio cdparanoia cdr cgi chm cli consolekit corba cracklib crypt css cups curl cxx daap db dbi dbm dbus declarative designer devhelp device-mapper dga dia dirac djvu doc dot dri ds2490 ds9097 ds9097u dts dv dvb dvd dvdr dvi dynamicplugin eds egl elf emacs emboss emf encode epiphany evo examples exif expat extensions extra extras faac faad fam ffmpeg fftw firefox fits flac fltk fontconfig foomaticdb fortran fortran95 fpm fpx fts3 fuse g3dvl garmin gd gdal gdbm gdu gedit geoip geolocation geos gfortran gif gimp git glade glib glpk gml gmp gnome gnome-keyring gnome-print gnuplot gnutls gold gphoto2 gpm grammar graphics graphtft graphviz grass gsl gsm gstreamer gtk gtk3 gudev guile harness hddtemp hdf hdf5 hdri html http httpd hwdb iconv icq icu id3 id3tag ide imagemagick imap inotify introspection ipod ipv6 irda ithreads jabber jadetex jbig john jpeg jpeg2k kate kdepim kdrive kerberos keymap kpathsea ladspa lame lapack laptop latex lcms ldap lensfun libffi libkms libnotify libsamplerate lirc live lua lzo mad mail maildir mapnik math matroska media-library mercurial mikmod mmx mmxext mng mod modules mono motif mozilla mp3 mp4 mpeg mpi mplayer mtp mudflap musepack musicbrainz mysql mysqli nautilus ncurses neXt netcdf netpbm network networking networkmanager nfs nls nntp nptl nsplugin ntfs ntp numpy obex objc ocaml ocr octave odbc ofa ogdi ogg openexr opengl openmp overview pam pango pcre pda pdf perl plasma plotutils plugins png podcast policykit portaudio posix postgres postscript ppds pppd preview-latex proj projectm projectx pstricks pulseaudio python python-bindings q16 q32 qemu qhull qt3support qt4 quicktime raw readline reiserfs reports rhythmbox rle romio rpc rrdcgi rrdtool sage samba sasl schroedinger science sdk sdl secure-delete semantic-desktop server session shout sip slang slp smart smbclient sms sndfile snmp soap sockets sound soup sox speex spell sql sqlite sse sse2 ssl startup-notification stlport subtitles subversion sudo suexec svg svm swig szip t1lib tcl tcpd tex tex4ht texmacs tgif theora thesaurus thinkpad threads thunderbird tidy tiff tk tools truetype udev udisks unicode upower usb userlocales utempter v4l vaapi vala vdpau video virtualbox visio vorbis vpx wav webdav webdav-serf webkit wifi win32codecs wmf wxwidgets x264 x86 xa xattr xcb xemacs xetex xext xft xine xml xmlreader xmlrpc xpm xv xvid xvmc yaml youtube zlib zvbi" ALSA_CARDS="intel8x0 ac97_codec emu10k1 emu10k1x" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic auth_digest authn_anon authn_dbd authn_core authn_dbm authn_default authn_file authz_core authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgid dav dav_fs dav_lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info lbmethod_byrequests log_config logio mem_cache mime mime_magic negotiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif slotmem_shm so socache_shmcb speling status unique_id unixd userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="canon fuji ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" CURL_SSL="nss" DRACUT_MODULES="caps lvm mdraid syslog" DVB_CARDS="usb-wt220u" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev synaptics" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="de fr ru" NETBEANS_MODULES="apisupport cnd dlight enterprise ergonomics groovy gsf harness ide identity j2ee java mobility nb php profiler ruby websvccommon xml" PHP_TARGETS="php5-3" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_2" QEMU_SOFTMMU_TARGETS="arm i386 x86_64" QEMU_USER_TARGETS="arm i386 x86_64" RUBY_TARGETS="ruby18 ruby19" USERLAND="GNU" VIDEO_CARDS="radeon vesa displaylink" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON root@thinkpad:/usr/local/portage/sci-visualization(182)# emerge -pqv '=app-doc/root-docs-5.34.03' [ebuild N ] app-doc/root-docs-5.34.03 USE="{-test}" * IMPORTANT: 3 news items need reading for repository 'gentoo'. * Use eselect news to read news items.
Hello, looks like your root can't TFile dictionaries. ATM I can't reproduce your issue. Please provide more information about your sci-physics/root installation: emerge -pqv and please verify package integrity (qcheck from portage-utils) or try to reinstall it. Also please provide environment file from root-docs build. Do you use any PREFIX environment or non-standard install path?
Hi Andrew, root@thinkpad:/home/rose(33)# emerge -pqv root [ebuild R ] sci-physics/root-5.34.03 USE="X doc emacs examples fftw fits graphviz htmldoc kerberos ldap math mpi mysql odbc opengl postgres python qt4 reflex ssl xml -afs -avahi -c++0x -openmp -oracle (-prefix) -pythia6 -pythia8 -ruby -xinetd -xrootd" [ebuild N ] app-doc/root-docs-5.34.03 USE="{-test}" * IMPORTANT: 3 news items need reading for repository 'gentoo'. * Use eselect news to read news items. root@thinkpad:/home/rose(34)# emerge -pvD root These are the packages that would be merged, in order: Calculating dependencies... done! [ebuild R ] sci-physics/root-5.34.03::science USE="X doc emacs examples fftw fits graphviz htmldoc kerberos ldap math mpi mysql odbc opengl postgres python qt4 reflex ssl xml -afs -avahi -c++0x -openmp -oracle (-prefix) -pythia6 -pythia8 -ruby -xinetd -xrootd" 0 kB [ebuild N ] app-doc/root-docs-5.34.03::science USE="{-test}" 0 kB Total: 2 packages (1 new, 1 reinstall), Size of downloads: 0 kB * IMPORTANT: 3 news items need reading for repository 'gentoo'. * Use eselect news to read news items. root@thinkpad:/home/rose(35)# qcheck -e root Checking sci-physics/root-5.34.03 ... * 5524 out of 5524 files are good root@thinkpad:/home/rose(36)# genlop -t root | tail Wed Sep 5 08:06:09 2012 >>> sci-physics/root-5.34.01 merge time: 1 hour, 10 minutes and 10 seconds. Sun Dec 30 23:28:45 2012 >>> sci-physics/root-5.34.03 merge time: 1 hour, 8 minutes and 57 seconds. Wed Jan 16 11:54:23 2013 >>> sci-physics/root-5.34.03 merge time: 1 hour, 8 minutes and 31 seconds. I don't know, what is the meaning of PREFIX. I tried 'man emerge', 'man ebuild', 'man portage' and 'man make.conf', but I did not find PREFIX. So I suppose, that I don't use it.
I energe two times more root, did some revdep-rbuild and tried to emerge root-docs. The last still fails: root@thinkpad:/root(7)# genlop -t root | tail Wed Jan 16 11:54:23 2013 >>> sci-physics/root-5.34.03 merge time: 1 hour, 8 minutes and 31 seconds. Sat Jan 26 23:22:42 2013 >>> sci-physics/root-5.34.03 merge time: 1 hour, 17 minutes and 16 seconds. Sun Jan 27 07:30:58 2013 >>> sci-physics/root-5.34.03 merge time: 1 hour, 17 minutes and 30 seconds. root@thinkpad:/root(8)# ll /var/tmp/portage/app-doc/root-docs-5.34.03/temp/environment -rw-rw-r-- 1 root portage 85110 Jan 28 06:37 /var/tmp/portage/app-doc/root-docs-5.34.03/temp/environment
Created attachment 337112 [details] /var/tmp/portage/app-doc/root-docs-5.34.03/temp/environment
Three weeks later it still fails with the same error.
Sorry, for delay, but I still can't reproduce this problem. Till the end of week I'll update ROOT to 5.34.05, maybe this will help.
Juergen, BTW what is your /etc/ld.so.conf content? It should contain /usr/lib/root.
(In reply to comment #7) > Juergen, BTW what is your /etc/ld.so.conf content? > It should contain /usr/lib/root. It containes /usr/lib/root: ... Processing hsimple.C... Warning in <TClass::TClass>: no dictionary for class TFile is available hsimple : Real Time = 0.25 seconds Cpu Time = 0.25 seconds (class TFile*)0x94dc0a0 This is the end of ROOT -- Goodbye Processing cernbuild.C... Error: Function Open(filename,"RECREATE") is not defined in current scope cernbuild.C:51: *** Interpreter error recovered *** make: *** [html] Error 1 * ERROR: app-doc/root-docs-5.34.03 failed (compile phase): ... >>> Failed to emerge app-doc/root-docs-5.34.03, Log file: >>> '/var/tmp/portage/app-doc/root-docs-5.34.03/temp/build.log' root@thinkpad:/root(4)# cat /etc/ld.so.conf # ld.so.conf autogenerated by env-update; make all changes to # contents of /etc/env.d directory /lib /usr/lib /usr/local/lib include ld.so.conf.d/*.conf /usr/lib/opengl/xorg-x11/lib /usr/lib/itcl4.0.0/ /usr/lib/itk4.0.0/ /usr/lib/paraview-3.98 /usr/lib/qca2 /usr/lib/qt4 /usr/lib/postgresql /usr/lib/postgresql-9.2/lib/ /usr/lib/postgresql-9.1/lib/ /usr/lib/postgresql-9.0/lib/ /usr/lib/postgresql-8.4/lib/ /usr/games/lib /usr/lib/R/lib /usr/lib/fltk-1 /usr/lib/octave-3.6.3 /usr/lib/root root@thinkpad:/root(5)#
Hello, I just bumped root and root-docs to 5.34.05 in the science overlay, please try it out.
It also fails with root-docs-5.34.05: ... Running /var/tmp/portage_standard/app-doc/root-docs-5.34.05/work/root/build/unix/compiledata.sh Making include/compiledata.h Generating README/ReleaseNotes from package docs... Generated README/ReleaseNotes/v534/index.html Check the generated file with: http://validator.w3.org/#validate_by_upload+with_options Welcome to the ROOT tutorials Type ".x demos.C" to get a toolbar from which to execute the demos Type ".x demoshelp.C" to see the help window ==> Many tutorials use the file hsimple.root produced by hsimple.C ==> It is recommended to execute hsimple.C before any other script Processing hsimple.C... Warning in <TClass::TClass>: no dictionary for class TFile is available hsimple : Real Time = 0.64 seconds Cpu Time = 0.25 seconds (class TFile*)0x906a0c8 This is the end of ROOT -- Goodbye Processing cernbuild.C... Error: Function Open(filename,"RECREATE") is not defined in current scope cernbuild.C:51: *** Interpreter error recovered *** make: *** [html] Error 1 * ERROR: app-doc/root-docs-5.34.05 failed (compile phase):
As far as I understand from bug 471236, 5.34.07 builds fine now.
