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Bug 423267 - sci-mathematics/fricas fails to build
Summary: sci-mathematics/fricas fails to build
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Andrey Grozin
URL: https://tinderboxlogs.s3.amazonaws.co...
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2012-06-24 06:42 UTC by Diego Elio Pettenò (RETIRED)
Modified: 2012-10-29 12:46 UTC (History)
2 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments

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Description Diego Elio Pettenò (RETIRED) gentoo-dev 2012-06-24 06:42:03 UTC
Portage 2.2.0_alpha110 (default/linux/amd64/10.0, gcc-4.7.1, glibc-2.15-r2, 3.4.2-hardened x86_64)
=================================================================
System uname: Linux-3.4.2-hardened-x86_64-AMD_Opteron-TM-_Processor_6272-with-gentoo-2.1
Timestamp of tree: Sat, 16 Jun 2012 07:30:01 +0000
app-shells/bash:          4.2_p29
dev-java/java-config:     2.1.11-r3
dev-lang/python:          2.7.3-r2, 3.2.3-r1
dev-util/cmake:           2.8.8-r3
dev-util/pkgconfig:       0.26
sys-apps/baselayout:      2.1-r1
sys-apps/openrc:          0.10.3
sys-apps/sandbox:         2.5
sys-devel/autoconf:       2.13, 2.69
sys-devel/automake:       1.9.6-r3, 1.11.5, 1.12.1
sys-devel/binutils:       2.22-r1
sys-devel/gcc:            4.5.3-r2, 4.7.1
sys-devel/gcc-config:     1.7.3
sys-devel/libtool:        2.4.2
sys-devel/make:           3.82-r3
sys-kernel/linux-headers: 3.4 (virtual/os-headers)
sys-libs/glibc:           2.15-r2
Repositories: gentoo
Installed sets: 
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="*"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe -ggdb -march=native -ftracer"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/config /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe -ggdb -march=native -ftracer"
DISTDIR="/var/cache/portage/distfiles"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles news parallel-fetch parse-eapi-ebuild-head protect-owned sandbox sfperms strict test test-fail-continue unknown-features-warn unmerge-orphans userfetch userpriv usersandbox"
FFLAGS=""
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j24"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/tmp"
PORTDIR="/var/cache/portage/tree"
PORTDIR_OVERLAY=""
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="3dnow 3dnowex acl amd64 berkdb bzip2 cli cracklib crypt cups cxx dri ffmpeg fortran gdbm gpm iconv ipv6 mmx modules mudflap multilib ncurses nls nptl openmp pam pcre pppd qt3support readline session sse sse2 sse3 sse4 ssl ssse3 tcpd unicode vhosts xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" PHP_TARGETS="php5-3" PYTHON_TARGETS="python3_2 python2_7" RUBY_TARGETS="ruby18 jruby ruby19 ree18" USERLAND="GNU" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, USE_PYTHON
Comment 1 Andrey Grozin gentoo-dev 2012-06-24 07:48:54 UTC
Cannot reproduce. Builds fine on my ~x86 box with the default set of USE flags (by default, sbcl is used). Haven't tried cmucl, clozurecl, ecl, clisp though). Which lisp have you used? Which version of it? What are the error messages?
Comment 2 Diego Elio Pettenò (RETIRED) gentoo-dev 2012-06-24 07:49:40 UTC
The log is what I get, it's using sbcl.
Comment 3 Andrey Grozin gentoo-dev 2012-06-24 08:09:56 UTC
I see. The current sbcl, asdf, asdf-binary-locations, common-lisp-controller combination in the main tree makes sbcl absolutely unusable. The same problem as bug #411453. For a long time I hoped that common-lisp will fix it, because this is not maxima's (or fricas') fault; I did not want to change the maxima ebuild for nothing. Recently this bug was fixed (worked around) by Jesus Rivero <neurogeek@gentoo.org> in maxima-5.27.0-r1 using an ugly hack. I can apply the same hack to fricas. The common-lisp herd is severely understuffed :-(

I use sbcl, asdf, common-lisp-controller from the lisp overlay, and compiling fricas and maxima (before the hack) is fine. I asked common-lisp@gentoo.org about the possibility to move working sbcl, asdf to the main tree. They depend, however, on a rather ugly common-lisp-3.eclass which, they say, is not ready for inclusion to the main tree. I agree, probably, it needs some improvement. However, this means that the prospect of seeing working sbcl, asdf in the main tree soon is nil.

So, probably, I need to copy the hack from maxima. But this leaves sbcl in the main tree unusable for any serious work. Sigh.
Comment 4 Andrey Grozin gentoo-dev 2012-08-05 05:29:48 UTC
I've added the ugly workaround for compiling with the broken sbcl which is in the main tree.
Comment 5 Kobboi 2012-10-28 22:17:48 UTC
Fricas-1.1.8 fails to build on my system (~amd64). Compilation hangs:

fricas_build_bindir = /var/tmp/portage/sci-mathematics/fricas-1.1.8/work/fricas-1.1.8/build/x86_64-pc-linux-gnu/bin
checking Lisp implementation... This is SBCL 1.0.55, an implementation of ANSI Common Lisp.
More information about SBCL is available at <http://www.sbcl.org/>.

SBCL is free software, provided as is, with absolutely no warranty.
It is mostly in the public domain; some portions are provided under
BSD-style licenses.  See the CREDITS and COPYING files in the
distribution for more information.
STYLE-WARNING: redefining ASDF::LISP-VERSION-STRING in DEFUN
ASDF could not load sb-posix because
Error while trying to load definition for system sb-posix from pathname
/usr/lib64/sbcl/sb-posix/sb-posix.asd:
   ASDF 2 is not compatible with ASDF-BINARY-LOCATIONS, which you are using.
ASDF 2 now achieves the same purpose with its builtin ASDF-OUTPUT-TRANSLATIONS,
which should be easier to configure. Please stop using ASDF-BINARY-LOCATIONS,
and instead use ASDF-OUTPUT-TRANSLATIONS. See the ASDF manual for details.
In case you insist on preserving your previous A-B-L configuration, but
do not know how to achieve the same effect with A-O-T, you may use function
ASDF:ENABLE-ASDF-BINARY-LOCATIONS-COMPATIBILITY as documented in the manual;
call that function where you would otherwise have loaded and configured A-B-L..

debugger invoked on a LOAD-SYSTEM-DEFINITION-ERROR in thread
#<THREAD "initial thread" RUNNING {1002999203}>:
  Error while trying to load definition for system sb-posix from pathname
  /usr/lib64/sbcl/sb-posix/sb-posix.asd:
     ASDF 2 is not compatible with ASDF-BINARY-LOCATIONS, which you are using.
ASDF 2 now achieves the same purpose with its builtin ASDF-OUTPUT-TRANSLATIONS,
which should be easier to configure. Please stop using ASDF-BINARY-LOCATIONS,
and instead use ASDF-OUTPUT-TRANSLATIONS. See the ASDF manual for details.
In case you insist on preserving your previous A-B-L configuration, but
do not know how to achieve the same effect with A-O-T, you may use function
ASDF:ENABLE-ASDF-BINARY-LOCATIONS-COMPATIBILITY as documented in the manual;

call that function where you would otherwise have loaded and configured A-B-L.
Type HELP for debugger help, or (SB-EXT:QUIT) to exit from SBCL.

restarts (invokable by number or by possibly-abbreviated name):
  0: [RETRY                                 ] Retry EVAL of current toplevel form.
  1: [CONTINUE                              ] Ignore error and continue loading file "/usr/lib64/sbcl/sb-posix/sb-posix.asd".
  2: [ABORT                                 ] Abort loading file "/usr/lib64/sbcl/sb-posix/sb-posix.asd".
  3: [REINITIALIZE-SOURCE-REGISTRY-AND-RETRY] Retry finding system sb-posix
                                              after reinitializing the
                                              source-registry.
  4:                                          Retry EVAL of current toplevel form.
  5:                                          Ignore error and continue sysinit file "/etc/sbclrc".
  6:                                          Abort sysinit file "/etc/sbclrc".
  7:                                          Skip to toplevel READ/EVAL/PRINT loop.
  8: [QUIT                                  ] Quit SBCL (calling #'QUIT, killing the process).

((FLET #:LAMBDA1984 :IN ASDF::LOAD-SYSDEF)
 #<SIMPLE-ERROR
   "ASDF 2 is not compatible with ASDF-BINARY-LOCATIONS, which you are using.
ASDF 2 now achieves the same purpose with its builtin ASDF-OUTPUT-TRANSLATIONS,
which should be easier to configure. Please stop using ASDF-BINARY-LOCATIONS,
and instead use ASDF-OUTPUT-TRANSLATIONS. See the ASDF manual for details.
In case you insist on preserving your previous A-B-L configuration, but
do not know how to achieve the same effect with A-O-T, you may use function
ASDF:ENABLE-ASDF-BINARY-LOCATIONS-COMPATIBILITY as documented in the manual;
call that function where you would otherwise have loaded and configured A-B-L."
   {100502DAC3}>)
0]
Comment 6 Kobboi 2012-10-28 22:19:27 UTC
Also, fricas-1.1.7-r1 is having the same problem for me.
Comment 7 Andrey Grozin gentoo-dev 2012-10-29 12:46:46 UTC
(In reply to comment #6)
> Also, fricas-1.1.7-r1 is having the same problem for me.
I don't understand how you've got both asdf-2 and asdf-binary-locations on your system. Either you use the main tree, or you use the lisp overlay.

* If you use the main tree, there is no asdf-2:

eeepc ~ # ls /usr/portage/dev-lisp/asdf
ChangeLog  Manifest  asdf-1.86-r1.ebuild  asdf-1.89.ebuild  metadata.xml

* If you use the lisp overlay, asdf-2.016.ebuild says

RDEPEND="!dev-lisp/cl-${PN}
                !dev-lisp/asdf-binary-locations"