Bug 403761 – [science overlay] sys-cluster/hpl-2.0-r1 build failure

• Status: RESOLVED DUPLICATE of bug 321539
• Product: Gentoo/Alt

[Description Richard Yao (RETIRED) 2012-02-15 03:50:58 UTC]

Created attachment 301997 [details]
sys-cluster/hpl-2.0-r1::science failure

I tried building sys-cluster/hpl-2.0-r1 from the science overlay on Gentoo Prefix on RHEL 6.2, but I had a build failure.

stonybrook@mercury001 ~ $ emerge --info
Portage 2.2.01.20153-prefix (prefix/linux/amd64, gcc-4.6.2, unavailable, 2.6.32-220.el6.x86_64 x86_64)
=================================================================
System uname: <censored>
Timestamp of tree: Mon, 13 Feb 2012 22:41:41 +0000
ccache version 3.1.4 [disabled]
app-shells/bash:          4.2_p20::gentoo_prefix
dev-lang/python:          2.7.2-r3::gentoo_prefix
dev-util/ccache:          3.1.4::gentoo_prefix
dev-util/cmake:           2.8.7-r3::gentoo_prefix
dev-util/pkgconfig:       0.26::gentoo_prefix
sys-devel/autoconf:       2.68::gentoo_prefix
sys-devel/automake:       1.11.1::gentoo_prefix
sys-devel/binutils:       2.22::gentoo_prefix
sys-devel/gcc:            4.2.4-r01.4::gentoo_prefix, 4.5.3-r1::gentoo_prefix, 4.6.2::gentoo_prefix
sys-devel/gcc-config:     1.5-r2::gentoo_prefix
sys-devel/libtool:        2.4-r4::gentoo_prefix
sys-devel/make:           3.82::gentoo_prefix
sys-kernel/linux-headers: 3.2::gentoo_prefix
Repositories: gentoo_prefix local_overlay science
Installed sets: 
ACCEPT_KEYWORDS="~amd64-linux"
ACCEPT_LICENSE="* -@EULA Intel-SDP"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=native -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/portage /etc/revdep-rebuild /etc/terminfo"
CXXFLAGS="-march=native -O2 -pipe"
DISTDIR="/home/stonybrook/gentoo/usr/portage/distfiles"
FEATURES="assume-digests binpkg-logs collision-protect distlocks ebuild-locks fixlafiles force-prefix news parallel-fetch parallel-install preserve-libs protect-owned sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS="-march=native -O2 -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="en_US.UTF-8"
LDFLAGS="-Wl,-O1"
MAKEOPTS="-j65"
PKGDIR="/home/stonybrook/gentoo/usr/portage/packages"
PORTAGE_CONFIGROOT="/home/stonybrook/gentoo/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/home/stonybrook/gentoo/var/tmp"
PORTDIR="/home/stonybrook/gentoo/usr/portage"
PORTDIR_OVERLAY="/home/stonybrook/gentoo/usr/local/portage /home/stonybrook/gentoo/var/lib/layman/science"
SYNC="rsync://rsync.prefix.freens.org/gentoo-portage-prefix"
USE="amd64 berkdb bzip2 cli cracklib crypt cxx dri fortran gdbm iconv ipv6 mmx modules mudflap ncurses nls nptl nptlonly openmp pcre pppd prefix readline session sse sse2 ssl sysfs tcpd unicode xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmip"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LINGUAS, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

[Comment 1 Jeremy Olexa (darkside) (RETIRED) 2012-02-15 03:59:25 UTC]

Well, that's a fun error: /home/stonybrook/gentoo/bin/bash: o: command not found

Nothing for prefix team to do here.

[Comment 2 Justin Bronder (RETIRED) 2013-07-01 23:33:51 UTC]

dup of #321539 most likely.  Please reopen if I'm wrong.

*** This bug has been marked as a duplicate of bug 321539 ***