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Bug 389765 - sci-biology/unafold - add graphic capabilities of mfold_utils
Summary: sci-biology/unafold - add graphic capabilities of mfold_utils
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: AMD64 Linux
: Normal enhancement (vote)
Assignee: Gentoo Science Biology related packages
Depends on: 597242
  Show dependency tree
Reported: 2011-11-06 21:12 UTC by Quincy
Modified: 2016-10-16 08:09 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---

diff to the current in-tree unafold ebuild (unafold.diff,820 bytes, patch)
2016-10-16 08:08 UTC, Kalin KOZHUHAROV
Details | Diff

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Description Quincy 2011-11-06 21:12:51 UTC
Unafold's calculations run fine with the currently installed version, but it can produce 2D plots of the structures it calculates. Therefore it needs mfold_utils (part of the predecessor of UNAFold), which is described at
For the full functionality of UNAFold it would be necessary to create a (very simple) ebuild for mfold_utils and introduce a USE flag for UNAFold which pulls in mfold_utils.
Local tests on my amd64 machine worked quite fine, mfold_utils compiles with some QA warnings, but is functional and provides the needed binaries to UNAFold.

Reproducible: Always
Comment 1 Kalin KOZHUHAROV 2016-10-16 08:08:47 UTC
Created attachment 450366 [details, diff]
diff to the current in-tree unafold ebuild

I just added the required capability, but it will need a new ebuild (this bug depends on bug #597242).

Both ebuilds are available in my overlay: