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Bug 346713 - sys-fs/jfsutils problem during linux start up: prompt to proceed "mkdir -p /var/lib/init.d".
Summary: sys-fs/jfsutils problem during linux start up: prompt to proceed "mkdir -p /v...
Status: CONFIRMED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: [OLD] Core system (show other bugs)
Hardware: AMD64 Linux
: High minor (vote)
Assignee: Lars Wendler (Polynomial-C)
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2010-11-24 23:38 UTC by Ivan Ristic
Modified: 2016-01-22 08:41 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


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Description Ivan Ristic 2010-11-24 23:38:02 UTC
System hangs sometimes while startup after fsck.jfs cleaned the FS and there is 
a message that /var/lib/init.d couldn't be accessed. You've been prompted to 
type in the root password and to type in a command "mkdir -p /var/lib/init.d".
When trying to list the permission of this folder (init.d) with 
"ls -al /var/lib/" the folder is there but there are only question signes 
(p.e. ??? ??? ???) for each permission.

The reason for this error is the JFS FS. 
Even if the system has been shutted down as usual over p.E. XFCE4 DE.
It'll be recovered as usual on startup but the problem still persists. 
I also tried to re-install baselayout package but this doesn't help.

What helped is to proceed "fsck.jfs -pav /dev/{partition}".
After that i was able to start my system again.

Anyway this isn't a big issue but the error message is unusual and many unexperienced maintainer would consider it that the system is broken.

So this issue is in my eyes fixed but it would be nice what's the reason for 
this issue. Could it be a case that i didn't unmount my dev folder after 
chroot. Well so far is this only a workaround for this issue which i couldn't find in this Bugzilla nor on Internet.

Reproducible: Didn't try

Steps to Reproduce:
It's hard to reproduce, it happened twice in 3 months.



Expected Results:  
The solution is just to force the fsck as usual 
"fsck.jfs -fav /dev/{jfs-partition}".

My "emerge --info" output.

================================================================================
================================================================================
Portage 2.1.8.3 (default/linux/amd64/10.0/desktop, gcc-4.4.4, glibc-2.11.2-r3, 2.6.35-gentoo-r6 x86_64)
=================================================================
System uname: Linux-2.6.35-gentoo-r6-x86_64-AMD_Athlon-tm-_64_X2_Dual_Core_Processor_4200+-with-gentoo-1.12.14
Timestamp of tree: Wed, 24 Nov 2010 18:15:01 +0000
app-shells/bash:     4.1_p7
dev-lang/python:     2.6.5-r3, 3.1.2-r4
dev-util/cmake:      2.8.1-r2
sys-apps/baselayout: 1.12.14-r1
sys-apps/sandbox:    2.3-r1
sys-devel/autoconf:  2.13, 2.65-r1
sys-devel/automake:  1.9.6-r3, 1.10.3, 1.11.1
sys-devel/binutils:  2.20.1-r1
sys-devel/gcc:       4.4.4-r2
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.10
sys-devel/make:      3.81-r2
virtual/os-headers:  2.6.30-r1
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* skype-eula"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=athlon64 -O2 -pipe -mmmx -msse -msse2 -m3dnow -ftracer -frename-registers -ftree-vectorize"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/X11/xkb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=athlon64 -O2 -pipe -mmmx -msse -msse2 -m3dnow -ftracer -frename-registers -ftree-vectorize"
DISTDIR="/usr/portage/distfiles"
FEATURES="assume-digests candy distlocks fail-clean fixpackages news nodoc noinfo parallel-fetch protect-owned sandbox sfperms strict unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
GENTOO_MIRRORS="http://gentoo.mneisen.org/ http://gentoo.mirror.pw.edu.pl/"
LDFLAGS="-Wl,-O1 -Wl,--sort-common -Wl,--warn-once -Wl,--as-needed"
LINGUAS="en de"
MAKEOPTS="-j3"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
SYNC="rsync://rsync3.de.gentoo.org/gentoo-portage"
USE="3dnow 3dnowext X a52 aac aalib acl acpi ads aio alsa amd64 apm autoipd avahi avi bash-completion berkdb bluetooth branding bzip2 cairo caps cdr cli consolekit cracklib crypt css cups cxx dbus dga dirac dri dts dvd dvdr emboss emerald encode evdev exif extras faac faad fam firefox flac fortran gdbm gif glitz gpm gtk gzip hal iconv ithreads jpeg jpeg2k kerberos lcms libnotify lock logrotate lzo mad mdnsresponder-compat mikmod mmx mng modules mp3 mp4 mpeg mpeg2 mpg mudflap multilib ncurses nls nptl nptlonly nsplugin nvidia ogg opengl openmp openntpd pam pango pcre pdf perl png ppds pppd python pyton qt3support quicktime readline samba schroedinger sdl session speex spell sse sse2 ssl startup-notification startup-notificationn svg symlink sysfs syslog theora threads thunar tiff truetype ts unicode usb userlocales vdpau vorbis x264 xcb xfce4 xml xorg xrandr xulrunner xv xvid zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev joystick" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="en de" PHP_TARGETS="php5-2" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="nvidia" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" 
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, LANG, LC_ALL, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY
Comment 1 Jeroen Roovers gentoo-dev 2010-12-15 01:05:49 UTC
CC'ing base-system@g.o for sys-apps/baselayout.