Bug 344403 – dev-libs/soprano-2.4.4 breaks while compiling virtuoso backend

• Status: RESOLVED FIXED
• Product: Gentoo Linux

[Description Stefano Priore 2010-11-06 17:22:04 UTC]

When emerging dev-libs/soprano-2.4.4, the compilation breaks during the build of soprano_virtuosobackend.

That's my emerge --info (build.log follows):


Portage 2.1.8.3 (default/linux/x86/10.0/desktop/kde, gcc-4.4.4, glibc-2.11.2-r3, 2.6.34-tuxonice-r6-Shidara i686)
=================================================================
System uname: Linux-2.6.34-tuxonice-r6-Shidara-i686-Intel-R-_Pentium-R-_M_processor_1.73GHz-with-gentoo-1.12.14
Timestamp of tree: Sat, 06 Nov 2010 11:30:01 +0000
app-shells/bash:     4.1_p7
dev-java/java-config: 2.1.11
dev-lang/python:     2.6.5-r3, 3.1.2-r4
dev-util/cmake:      2.8.1-r2
sys-apps/baselayout: 1.12.14-r1
sys-apps/sandbox:    2.3-r1
sys-devel/autoconf:  2.13, 2.65-r1
sys-devel/automake:  1.6.3-r1, 1.8.5-r4, 1.9.6-r3, 1.10.3, 1.11.1
sys-devel/binutils:  2.20.1-r1
sys-devel/gcc:       4.4.4-r2
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.10
sys-devel/make:      3.81-r2
virtual/os-headers:  2.6.30-r1
ACCEPT_KEYWORDS="x86"
ACCEPT_LICENSE="*"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -march=native -pipe -fomit-frame-pointer"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/X11/xkb /usr/share/config /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c"
CXXFLAGS="-O2 -march=native -pipe -fomit-frame-pointer"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="--with-bdeps=y"
FEATURES="assume-digests distlocks fixpackages news parallel-fetch protect-owned sandbox sfperms strict unmerge-logs unmerge-orphans userfetch"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
LANG="it_IT.UTF-8"
LC_ALL="it_IT.UTF-8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LINGUAS="it en"
MAKEOPTS="-j2"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --e
xclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY=""
SYNC="rsync://jacob.island.homelinux.net/gentoo-portage"
USE="X a52 aac accessibility acl acpi alsa bash-completion berkdb bidi blas bluetooth branding bzip2 cairo cddb cdparanoia cdr cjk cli consolekit cracklib c
rypt css cups curl cvs cxx dbus dga directfb djvu dri dts dv dvd dvdr emboss encode exif expat fam fbcon ffmpeg fftw firefox flac fontconfig fortran ftp gd 
gdbm gif gimp gmp gnutls gpm graphviz gsm gstreamer gzip hal handbook hddtemp iconv icu idn ieee1394 imagemagick imlib innodb ipod java javascript jbig joys
tick jpeg jpeg2k kde kontact lame latex lcms libcaca libnotify libsamplerate lm_sensors lzma lzo m17n-lib mad maildir mhash mikmod mime mmx mng modplug modu
les mozilla mp3 mp4 mpeg mplayer mtp mudflap musepack musicbrainz ncurses networkmanager nls nntp nptl nptlonly nsplugin offensive ogg openexr opengl pam pa
ngo pcmcia pcre pda pdf perl plasma plotutils png policykit python qt3support qt4 quicktime raw readline rss samba sasl scanner sdl semantic-desktop session
 shorten slang sndfile sox speex spell sse sse2 ssl startup-notification subversion svg sysfs syslog szip taglib tcpd theora threads tidy tiff timidity true
type unicode usb v4l v4l2 vcd vim-syntax vnc vorbis wavpack wifi win32codecs wmf x264 x86 xattr xcb xcomposite xface xine xml xorg xpm xscreensaver xulrunne
r xv xvid zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 
intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958
 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic auth_digest authn
_anon authn_dbd authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_
lock dbd deflate dir disk_cache env expires ext_filter file_cache filter headers ident imagemap include info log_config logio mem_cache mime mime_magic nego
tiation proxy proxy_ajp proxy_balancer proxy_connect proxy_http rewrite setenvif so speling status unique_id userdir usertrack vhost_alias" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="evdev keyboard mouse syna
ptics joystick" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="it en" PHP_TARGETS="php5-2" RUBY
_TARGETS="ruby18" SANE_BACKENDS="net plustek" USERLAND="GNU" VIDEO_CARDS="intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p ifa
ce geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account" 
Unset:  CPPFLAGS, CTARGET, FFLAGS, INSTALL_MASK, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS

Reproducible: Always

[Comment 1 Stefano Priore 2010-11-06 17:23:23 UTC]

Created attachment 253403 [details]
dev-libs/soprano-2.4.4 build.log

[Comment 2 Andreas K. Hüttel 2010-11-11 22:18:55 UTC]

[ 55%] make[2]: *** No rule to make target `/usr/lib/libjvm.so', needed by `backends/sesame2/libsoprano_sesame2backend.so'.  Stop.

What's your output of "java-config -L" ?

[Comment 3 Stefano Priore 2010-11-13 13:21:45 UTC]

# java-config -L

The following VMs are available for generation-2:
*)      IcedTea6-bin 1.9.1 [icedtea6-bin]

[Comment 4 Andreas K. Hüttel 2011-01-21 23:02:14 UTC]

Could you please try soprano-2.5.2 (or even better, soprano-2.5.63_pre20101127 from the kde overlay) and tell us if the problem still exists?

-- Found JNI: /opt/icedtea6-bin-1.9.1/jre/lib/i386/libjawt.so
-- Found Java JNI >= 1.4: /opt/icedtea6-bin-1.9.1/include, /usr/lib/libjvm.so
-- Found iODBC 3.52.7: libs - /usr/lib/libiodbc.so; includes - /usr/include/iodbc

The problem actually already occurs in the configure phase; in the middle line, the libjvm.so should also be somewhere in /opt/icedtea...

[Comment 5 Theo Chatzimichos (RETIRED) 2011-03-03 23:34:57 UTC]

this should be fixed, please reopen if it persists. thanks