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Bug 306735 - Problems with sci-astronomy/ds9-6.0 and/or sci-astronomy/ast-5.3.1
Summary: Problems with sci-astronomy/ds9-6.0 and/or sci-astronomy/ast-5.3.1
Status: RESOLVED WONTFIX
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: High normal (vote)
Assignee: Gentoo Astronomy project
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2010-02-24 21:58 UTC by Peter Weilbacher
Modified: 2012-01-29 23:47 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


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Description Peter Weilbacher 2010-02-24 21:58:24 UTC
I installed lots of packages to be able to install sci-astronomy/ds9-6.0 through portage, including sci-astronomy/ast-5.3.1. Many of them had to be unmasked by specifying the ~amd64 keyword.

Now I find that whenever I do any operation in ds9, I get the following error output in the console:

   !! AST: Error at line 156 in file cbgrid.C.
   !  astGLine: No graphics facilities are available.
   !  Re-link using an option such as '-pgplot' with the ast_link script.
   !  astGrid(Plot): Graphics error in astGLine. 

Maybe related to this I also cannot load FITS files specified on the command line (ds9 starts but doesn't load them).

Reproducible: Always

Steps to Reproduce:
1. Install ds9 through portage
2. start it, e.g. using
      $ ds9 file1.fits file2.fits
3. move the mouse around in the (empty) ds9 window
Actual Results:  
Error message appears repeatedly, files are not loaded.

Expected Results:  
Files should be loaded, no error message should appear.

The static binary Linux64 version from http://hea-www.harvard.edu/RD/ds9/ works without any problems. The error message suggests that the problem is in the ast library, but the ebuild doesn't offer any way to link against pgplot (pgplot-5.2.2-r3 is installed on this system, also through portage).


$ emerge --info
Portage 2.2_rc62 (default/linux/amd64/10.0, gcc-4.4.3, glibc-2.10.1-r1, 2.6.32-tuxonice-r5 x86_64)
=================================================================
System uname: Linux-2.6.32-tuxonice-r5-x86_64-Intel-R-_Core-TM-2_Duo_CPU_P8600_@_2.40GHz-with-gentoo-1.12.13
Timestamp of tree: Wed, 24 Feb 2010 20:00:01 +0000
app-shells/bash:     4.0_p35
dev-java/java-config: 2.1.10
dev-lang/python:     2.6.4-r1
dev-python/pycrypto: 2.1.0_beta1
dev-util/cmake:      2.6.4-r3
sys-apps/baselayout: 1.12.13
sys-apps/sandbox:    2.2
sys-devel/autoconf:  2.13, 2.63-r1
sys-devel/automake:  1.9.6-r2, 1.10.2
sys-devel/binutils:  2.18-r3
sys-devel/gcc:       4.4.3
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.6b
virtual/os-headers:  2.6.30-r1
ACCEPT_KEYWORDS="amd64"
ACCEPT_LICENSE="* -@EULA PUEL dlj-1.1 skype-eula"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-march=core2 -O2 -pipe"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/X11/xkb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/texmf/language.dat.d /etc/texmf/language.def.d /etc/texmf/updmap.d /etc/texmf/web2c /etc/udev/rules.d"
CXXFLAGS="-march=core2 -O2 -pipe"
DISTDIR="/usr/portage/distfiles"
EMERGE_DEFAULT_OPTS="-j3 --load-average=4"
FEATURES="assume-digests distlocks fixpackages news noinfo parallel-fetch preserve-libs protect-owned sandbox sfperms strict unmerge-logs unmerge-orphans userfetch"
GENTOO_MIRRORS="ftp://ftp.wh2.tu-dresden.de/pub/mirrors/gentoo ftp://ftp.tu-clausthal.de/pub/linux/gentoo http://de-mirror.org/distro/gentoo ftp://ftp.rz.tu-bs.de/pub/mirror/ftp.gentoo.org/gentoo-distfiles http://ftp.spline.inf.fu-berlin.de/mirrors/gentoo ftp://ftp.spline.inf.fu-berlin.de/mirrors/gentoo http://distfiles.gentoo.org http://www.ibiblio.org/pub/Linux/distributions/gentoo"
LANG="en_US.ISO-8859-1"
LDFLAGS="-Wl,-O1"
LINGUAS="en de pl es"
MAKEOPTS="-s -j2"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/home/portage/overlay"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="X a52 aac acl acpi alsa amd64 bash-completion berkdb bzip2 cairo cddb cdr cli consolekit cracklib crypt cups cxx dell dga dri dvd dvdread dvipdfm encode esd exif fat fbcondecor fbsplash ffmpeg firefox flac fontconfig fortran gd gdbm gif gimpprint gnome gnome-keyring gnuplot gpm gtk hal hddtemp iconv ipv6 jfs jpeg jpeg2k laptop latex3 lcms libnotify loop-aes mad mmx modules mozbranding mp3 mpeg mplayer mudflap multilib ncurses nls nptl nptlonly nsplugin ntfs nvidia ogg onlyalpine opengl openmp pam passfile pcre pdf perl png pni pppd python readline reflection sasl sdl secure-delete session smp spell spl sqlite sqlite3 sse sse2 sse3 sse4_1 ssl ssse3 svg sysfs tcl tcpd theora threads tiff tk truetype unicode v4l v4l2 vim-pager vim-syntax vim-with-x vorbis wifi x264 xine xorg xulrunner xv xvid zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="keyboard mouse synaptics evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="en de pl es" RUBY_TARGETS="ruby18" USERLAND="GNU" VIDEO_CARDS="nv nvidia vesa" 
Unset:  CPPFLAGS, CTARGET, FFLAGS, INSTALL_MASK, LC_ALL, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 1 Sébastien Fabbro (RETIRED) gentoo-dev 2012-01-29 23:47:10 UTC
ds9 gone from the tree.