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Bug 272577 - sci-chemistry/ortep3 fails to find a fortran compiler
Summary: sci-chemistry/ortep3 fails to find a fortran compiler
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: All Linux
: High normal (vote)
Assignee: Gentoo Chemistry-Related Packages
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2009-06-04 11:57 UTC by Diego Elio Pettenò (RETIRED)
Modified: 2010-06-24 16:13 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
Build log (ortep3-1.0.3:20090604-022937.log,1.11 KB, text/plain)
2009-06-04 11:57 UTC, Diego Elio Pettenò (RETIRED)
Details

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Description Diego Elio Pettenò (RETIRED) gentoo-dev 2009-06-04 11:57:46 UTC
Portage 2.1.6.13 (!../var/cache/portage/tree/profiles/default/linux/x86/2008.0, gcc-4.4.0-asneeded, glibc-2.10.1-r0, 2.6.29-gentoo-r5 i686)
=================================================================
System uname: Linux-2.6.29-gentoo-r5-i686-Quad-Core_AMD_Opteron-tm-_Processor_2350-with-gentoo-2.0.0
Timestamp of tree: Thu, 04 Jun 2009 11:00:01 +0000
distcc 3.1 i686-pc-linux-gnu [disabled]
ccache version 2.4 [enabled]
app-shells/bash:     4.0_p24
dev-java/java-config: 1.3.7-r1, 2.1.8
dev-lang/python:     2.5.4-r2, 2.6.2-r1
dev-python/pycrypto: 2.0.1-r8
dev-util/ccache:     2.4-r8
dev-util/cmake:      2.6.3
sys-apps/baselayout: 2.0.0
sys-apps/openrc:     0.4.3-r1
sys-apps/sandbox:    1.9
sys-devel/autoconf:  2.13, 2.63
sys-devel/automake:  1.4_p6, 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10.2
sys-devel/binutils:  2.19.1-r1
sys-devel/gcc-config: 1.4.1
sys-devel/libtool:   2.2.6a
virtual/os-headers:  2.6.28-r1
ACCEPT_KEYWORDS="x86 ~x86"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-O2 -pipe"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc /opt/glftpd/etc /opt/glftpd/ftp-data /opt/openfire/resources/security/ /opt/openjms/config /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/bufrtables /usr/share/config /var/bind /var/lib/hsqldb /var/phxd /var/qmail/alias /var/qmail/control /var/vpopmail/etc"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/eselect/postgresql /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/udev/rules.d"
CXXFLAGS="-O2 -pipe"
DISTDIR="/var/cache/distfiles"
FEATURES="ccache distlocks fixpackages parallel-fetch protect-owned sandbox sfperms strict test test-fail-continue unmerge-orphans userfetch"
GENTOO_MIRRORS="http://linux.rz.ruhr-uni-bochum.de/download/gentoo-mirror/ http://ftp.uni-erlangen.de/pub/mirrors/gentoo"
INSTALL_MASK="  /usr/share/doc  /usr/share/man  /usr/share/info"
LDFLAGS="-Wl,-O1"
MAKEOPTS="-j14"
PKGDIR="/var/spool/portage/packages"
PORTAGE_COMPRESS=""
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/var/cache/portage/tree-tinderbox"
SYNC="rsync://rsync.gentoo.org/gentoo-portage"
USE="acl berkdb bzip2 cli cracklib crypt cups dri fortran gdbm gpm iconv ipv6 isdnlog java5 java6 midi mudflap ncurses nls nptl nptlonly openmp pam pcre perl pppd python readline reflection session spl ssl sysfs tcpd unicode x86 xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" USERLAND="GNU" VIDEO_CARDS="fbdev glint i810 intel mach64 mga neomagic nv r128 radeon savage sis tdfx trident vesa vga via vmware voodoo"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, LANG, LC_ALL, LINGUAS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY
Comment 1 Diego Elio Pettenò (RETIRED) gentoo-dev 2009-06-04 11:57:57 UTC
Created attachment 193499 [details]
Build log
Comment 2 Juergen Rose 2009-10-17 09:55:13 UTC
The same issue occurs here:
root@thinkpad:/root(35)# emerge -vD ortep3
...
Calculating dependencies ... done!
[ebuild  N    ] sci-chemistry/ortep3-1.0.3  USE="-debug" 174 kB
...
 * checking miscfile checksums ;-) ...                                                                                                                  [ ok ]
 * None of the needed Fortran Compilers (g77) is installed.
 * To install one of these, choose one of the following steps:
 * [1] USE="fortran" emerge =sys-devel/gcc-3*
 * ERROR: sci-chemistry/ortep3-1.0.3 failed:
 *   Install a Fortran Compiler !


root@thinkpad:/root(39)# type gfortran
gfortran is /usr/bin/gfortran
root@thinkpad:/root(40)# qlist -Iv gcc
dev-java/relaxngcc-1.12
sys-devel/gcc-3.4.6-r2
sys-devel/gcc-4.2.4-r1
sys-devel/gcc-4.3.4
sys-devel/gcc-4.4.1
sys-devel/gcc-config-1.4.1
x11-misc/gccmakedep-1.0.2
root@thinkpad:/root(41)# emerge -pvD gcc

These are the packages that would be merged, in order:

Calculating dependencies ... done!
[ebuild   R   ] sys-devel/gcc-4.4.1  USE="doc fortran gcj gtk mudflap nls nptl objc openmp (-altivec) -bootstrap -build (-fixed-point) -graphite (-hardened) -ip28 -ip32r10k (-libffi) (-multilib) -multislot (-n32) (-n64) -nocxx -objc++ -objc-gc -test -vanilla" 0 kB

Total: 1 package (1 reinstall), Size of downloads: 0 kB
root@thinkpad:/root(42)# gcc -v
Using built-in specs.
Target: i686-pc-linux-gnu
Configured with: /var/tmp/portage/sys-devel/gcc-4.4.1/work/gcc-4.4.1/configure --prefix=/usr --bindir=/usr/i686-pc-linux-gnu/gcc-bin/4.4.1 --includedir=/usr/lib/gcc/i686-pc-linux-gnu/4.4.1/include --datadir=/usr/share/gcc-data/i686-pc-linux-gnu/4.4.1 --mandir=/usr/share/gcc-data/i686-pc-linux-gnu/4.4.1/man --infodir=/usr/share/gcc-data/i686-pc-linux-gnu/4.4.1/info --with-gxx-include-dir=/usr/lib/gcc/i686-pc-linux-gnu/4.4.1/include/g++-v4 --host=i686-pc-linux-gnu --build=i686-pc-linux-gnu --disable-altivec --disable-fixed-point --without-ppl --without-cloog --enable-nls --without-included-gettext --with-system-zlib --disable-checking --disable-werror --enable-secureplt --disable-multilib --enable-libmudflap --disable-libssp --enable-libgomp --enable-cld --with-python-dir=/share/gcc-data/i686-pc-linux-gnu/4.4.1/python --enable-java-awt=gtk --with-arch=i686 --enable-languages=c,c++,java,objc,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --with-bugurl=http://bugs.gentoo.org/ --with-pkgversion='Gentoo 4.4.1 p1.0'
Thread model: posix
gcc version 4.4.1 (Gentoo 4.4.1 p1.0) 
root@thinkpad:/root(43)# gcc-config -l
 [1] i686-pc-linux-gnu-3.4.6
 [2] i686-pc-linux-gnu-3.4.6-hardened
 [3] i686-pc-linux-gnu-3.4.6-hardenednopie
 [4] i686-pc-linux-gnu-3.4.6-hardenednopiessp
 [5] i686-pc-linux-gnu-3.4.6-hardenednossp
 [6] i686-pc-linux-gnu-4.2.4
 [7] i686-pc-linux-gnu-4.3.4
 [8] i686-pc-linux-gnu-4.4.1 *




Comment 3 Justin Lecher (RETIRED) gentoo-dev 2010-06-24 16:13:37 UTC
+*ortep3-1.0.3-r1 (24 Jun 2010)
+
+  24 Jun 2010; Justin Lecher <jlec@gentoo.org> -ortep3-1.0.3.ebuild,
+  +ortep3-1.0.3-r1.ebuild:
+  Fix for recent fortran compilers, #272577
+