Whenever I try to compile CVS (dev-util/cvs-1.12.12-r6) it hangs. The last output lines are: >>>snip<<< checking for stdlib.h... (cached) yes checking for sys/time.h... (cached) yes checking for unistd.h... (cached) yes checking for alarm... yes checking for working mktime... Reproducible: Always Steps to Reproduce: 1. emerge cvs Actual Results: Hangs when checking for working mktime. Expected Results: Should detect a working mktime (or not) and continue This system is build from stage3 just yesterday. I already searched bugzilla for this, and found this *probably* related bug: http://bugs.gentoo.org/show_bug.cgi?id=220040 . The patch is applied to the version of bash that I'm using, I might be the cause... Emerge info: Portage 2.1.6.7 (default/linux/x86/2008.0, gcc-4.3.2, glibc-2.8_p20080602-r1, 2.6.28-gentoo-r5 i686) ================================================================= System uname: Linux-2.6.28-gentoo-r5-i686-AMD_Athlon-tm-_64_Processor_3200+-with-glibc2.0 Timestamp of tree: Sun, 26 Apr 2009 05:00:01 +0000 app-shells/bash: 3.2_p39 dev-java/java-config: 2.1.7 dev-lang/python: 2.4.4-r13, 2.5.4-r2 dev-python/pycrypto: 2.0.1-r8 dev-util/cmake: 2.6.2-r1 sys-apps/baselayout: 1.12.11.1 sys-apps/sandbox: 1.6-r2 sys-devel/autoconf: 2.13, 2.63 sys-devel/automake: 1.7.9-r1, 1.9.6-r2, 1.10.2 sys-devel/binutils: 2.18-r3 sys-devel/gcc-config: 1.4.0-r4 sys-devel/libtool: 1.5.26 virtual/os-headers: 2.6.28-r1 ACCEPT_KEYWORDS="x86" ALSA_CARDS="intel8x0" ALSA_PCM_PLUGINS="asym dmix empty ioplug plug rate softvol route" APACHE2_MODULES="" ARCH="x86" AUTOCLEAN="yes" CBUILD="i686-pc-linux-gnu" CFLAGS="-O2 -march=k8 -pipe -fomit-frame-pointer" CHOST="i686-pc-linux-gnu" CLEAN_DELAY="5" COLLISION_IGNORE="/lib/modules" CONFIG_PROTECT="/etc" CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ /etc/fonts/fonts.conf /etc/gconf /etc/revdep-rebuild /etc/sandbox.d /etc/splash /etc/terminfo /etc/udev/rules.d" CVS_RSH="ssh" CXXFLAGS="-O2 -march=k8 -pipe -fomit-frame-pointer" DISPLAY=":0.0" DISTDIR="/usr/portage/distfiles" EDITOR="/bin/nano" ELIBC="glibc" EMERGE_WARNING_DELAY="10" FEATURES="distlocks fixpackages parallel-fetch protect-owned sandbox sfperms strict unmerge-orphans userfetch" FETCHCOMMAND="/usr/bin/wget -t 5 -T 60 --passive-ftp -O "${DISTDIR}/${FILE}" "${URI}"" GCC_SPECS="" GDK_USE_XFT="1" GENTOO_MIRRORS="http://ftp.snt.utwente.nl/pub/os/linux/gentoo ftp://ftp.snt.utwente.nl/pub/os/linux/gentoo http://gentoo.tiscali.nl/ ftp://gentoo.tiscali.nl/pub/mirror/gentoo/ http://mirror.muntinternet.net/pub/gentoo/ ftp://mirror.muntinternet.net/pub/gentoo/ http://mirror.cambrium.nl/pub/os/linux/gentoo/ ftp://mirror.cambrium.nl/pub/os/linux/gentoo/ http://mirror.leaseweb.com/gentoo/ ftp://mirror.leaseweb.com/gentoo/" HOME="/root" HZ="100" INFOPATH="/usr/share/info:/usr/share/binutils-data/i686-pc-linux-gnu/2.18/info:/usr/share/gcc-data/i486-pc-linux-gnu/4.1.2/info:/usr/share/gcc-data/i686-pc-linux-gnu/4.3.2/info" INPUT_DEVICES="evdev" JAVAC="/etc/java-config-2/current-system-vm/bin/javac" JAVA_HOME="/etc/java-config-2/current-system-vm" JDK_HOME="/etc/java-config-2/current-system-vm" KERNEL="linux" LCD_DEVICES="" LDFLAGS="-Wl,-O1" LESS="-R -M --shift 5" LESSOPEN="|lesspipe.sh %s" LOGNAME="root" LS_COLORS="rs=0:di=01;34:ln=01;36:hl=44;37:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=01;05;37;41:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.bz2=01;31:*.bz=01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.pdf=00;32:*.ps=00;32:*.txt=00;32:*.patch=00;32:*.diff=00;32:*.log=00;32:*.tex=00;32:*.doc=00;32:*.aac=00;36:*.au=00;36:*.flac=00;36:*.mid=00;36:*.midi=00;36:*.mka=00;36:*.mp3=00;36:*.mpc=00;36:*.ogg=00;36:*.ra=00;36:*.wav=00;36:*.axa=00;36:*.oga=00;36:*.spx=00;36:*.xspf=00;36:" MANPATH="/etc/java-config-2/current-system-vm/man:/usr/local/share/man:/usr/share/man:/usr/share/binutils-data/i686-pc-linux-gnu/2.18/man:/usr/share/gcc-data/i486-pc-linux-gnu/4.1.2/man:/usr/share/gcc-data/i686-pc-linux-gnu/4.3.2/man:/etc/java-config/system-vm/man/" NETBEANS="apisupport cnd groovy gsf harness ide identity j2ee java mobility nb php profiler soa visualweb webcommon websvccommon xml" OPENGL_PROFILE="xorg-x11" PAGER="/usr/bin/less" PATH="/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin:/usr/i486-pc-linux-gnu/gcc-bin/4.1.2:/usr/i686-pc-linux-gnu/gcc-bin/4.3.2" PKGDIR="/usr/portage/packages" PORTAGE_ARCHLIST="ppc s390 amd64 x86 ppc64 x86-fbsd m68k arm sparc sh mips ia64 alpha hppa amd64-fbsd sparc-fbsd" PORTAGE_BINHOST_CHUNKSIZE="3000" PORTAGE_BIN_PATH="/usr/lib/portage/bin" PORTAGE_COMPRESS_EXCLUDE_SUFFIXES="css gif htm[l]? jp[e]?g js pdf png" PORTAGE_CONFIGROOT="/" PORTAGE_COUNTER_HASH="4ef0e387b6243066ac6794909b718313" PORTAGE_DEBUG="0" PORTAGE_DEPCACHEDIR="/var/cache/edb/dep" PORTAGE_ELOG_CLASSES="log warn error" PORTAGE_ELOG_MAILFROM="portage@localhost" PORTAGE_ELOG_MAILSUBJECT="[portage] ebuild log for ${PACKAGE} on ${HOST}" PORTAGE_ELOG_MAILURI="root" PORTAGE_ELOG_SYSTEM="save_summary echo" PORTAGE_FETCH_CHECKSUM_TRY_MIRRORS="5" PORTAGE_FETCH_RESUME_MIN_SIZE="350K" PORTAGE_GID="250" PORTAGE_INST_GID="0" PORTAGE_INST_UID="0" PORTAGE_PYM_PATH="/usr/lib/portage/pym" PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages" PORTAGE_RSYNC_RETRIES="3" PORTAGE_TMPDIR="/var/tmp" PORTAGE_VERBOSE="1" PORTAGE_WORKDIR_MODE="0700" PORTDIR="/usr/portage" PORTDIR_OVERLAY="/usr/portage/local/layman/nouveau" PRELINK_PATH_MASK="/usr/lib/klibc" PROFILE_ONLY_VARIABLES="ARCH ELIBC KERNEL USERLAND" PWD="/root" RESUMECOMMAND="/usr/bin/wget -c -t 5 -T 60 --passive-ftp -O "${DISTDIR}/${FILE}" "${URI}"" ROOT="/" ROOTPATH="/opt/bin:/usr/i486-pc-linux-gnu/gcc-bin/4.1.2:/usr/i686-pc-linux-gnu/gcc-bin/4.3.2" RPMDIR="/usr/portage/rpm" SHELL="/bin/bash" SHLVL="1" SYNC="rsync://rsync.europe.gentoo.org/gentoo-portage" TERM="rxvt-unicode" USE="3dnow 3dnowext X acpi crypt custom-cflags custom-cxxflags dbus dri gnutls gtk hal libnotify lm_sensors mmap mmx mmxext nls nptl opengl session sharedmem sndfile sse sse2 startup-notification symlink syslog threads truetype unicode win32codecs x86 xcb xft xscreensaver xulrunner" ALSA_CARDS="intel8x0" ALSA_PCM_PLUGINS="asym dmix empty ioplug plug rate softvol route" ELIBC="glibc" INPUT_DEVICES="evdev" KERNEL="linux" USERLAND="GNU" VIDEO_CARDS="nouveau" USER="root" USERLAND="GNU" USE_EXPAND="ALSA_CARDS ALSA_PCM_PLUGINS APACHE2_MODULES APACHE2_MPMS CAMERAS CROSSCOMPILE_OPTS DVB_CARDS ELIBC FCDSL_CARDS FOO2ZJS_DEVICES FRITZCAPI_CARDS INPUT_DEVICES KERNEL LCD_DEVICES LINGUAS LIRC_DEVICES MISDN_CARDS NETBEANS_MODULES USERLAND VIDEO_CARDS" USE_EXPAND_HIDDEN="CROSSCOMPILE_OPTS ELIBC KERNEL USERLAND" USE_ORDER="env:pkg:conf:pkginternal:env.d" VIDEO_CARDS="nouveau" _="/usr/bin/emerge"
Does it continue after some minutes? Please provide the output of emerge -pqv cvs.
(In reply to comment #1) > Does it continue after some minutes? Please provide the output of emerge -pqv > cvs. > Sorry, I should have mentionend this because it did in the other bug. No, this one *completely* stops. It does not continue whatsoever. A process called conftest completely hogs the CPU when it hangs. I kept it running for 30 minutes to be sure :) Alpha ~ # emerge -pqv cvs [ebuild N ] dev-util/cvs-1.12.12-r6 USE="crypt nls -doc -kerberos -pam -server"
I have the same behaviour as in http://bugs.gentoo.org/show_bug.cgi?id=220040 . (running amd64)
I'll throw in my package.use and package.keywords file which could help (or not). I'm thinking that the problem might be elsewhere or arch dependant (32 vs 64 bit) ??? >>><<< cat /etc/portage/package.use x11-base/xorg-server sdl xorg x11-misc/xscreensaver jpeg net-wireless/bluez-utils usb x11-misc/xbindkeys tk dev-java/sun-jre-bin alsa nsplugin mail-client/claws-mail spell ssl app-office/openoffice binfilter cups gstreamer java nsplugin app-text/epdfview cups media-sound/exaile alsa mad dev-lang/python sqlite media-video/ffmpeg aac alsa amr dirac encode gsm mp3 network schroedinger speex theora vorbis x264 xvid zlib media-sound/easytag aac flac mp3 speex vorbis wavpack media-sound/audacity alsa ffmpeg flac id3tag libsamplerate mp3 soundtouch twolame vamp vorbis media-gfx/gimp alsa curl exif mng pdf png svg tiff wmf app-text/poppler-bindings cairo media-gfx/imagemagick bzip2 corefonts djvu fontconfig fpx graphviz gs hdri jbig jpeg jpeg2k openexr png raw svg tiff wmf zlib media-sound/streamripper vorbis media-gfx/mirage x11-libs/gtk+ jpeg tiff jpeg2k app-cdr/recorder dvdr media-video/vlc a52 aac alsa cdda cddax cddb cdio dirac dts dvd dvdnav ffmpeg flac fontconfig id3tag libass libgcrypt live matroska mp3 mpeg musepack nsplugin ogg png rtsp samba schroedinger shout speex stream svg taglib theora twolame vcdinfo vcdx vorbis x264 xv media-video/mplayer a52 aac alsa amrnb amrwb ass cddb cdio cdparanoia dirac dts dvd dvdnav enca encode ftp gif -gtk iconv jpeg live lzo mad md5sum mng mp2 mp3 musepack png pnm quicktime rar real rtc samba schroedinger speex theora vorbis x264 xv xvid xvmc media-sound/mp3splt-gtk gstreamer sys-power/suspend fbsplash app-emulation/wine alsa cups gecko jpeg samba app-emulation/virtualbox-ose alsa qt4 x11-misc/x11vnc jpeg ssl zlib net-fs/samba async cups fam net-ftp/vsftpd ssl net-misc/tor bundledlibevent net-proxy/privoxy zlib #net-dns/pdnsd urandom www-servers/lighttpd bzip2 fam ssl webdav net-p2p/amule geoip net-misc/openvpn ssl net-misc/cadaver ssl sys-apps/busybox -dynamic static app-admin/conky hddtemp #app-admin/conky hddtemp wifi app-admin/gkrellm hddtemp x11-misc/adesklets fontconfig python media-libs/imlib2 gif jpeg png tiff dev-lang/python ssl net-print/cups jpeg png samba tiff app-text/ghostscript-gpl cups net-print/hplip cupsddk net-print/foomatic-filters cups x11-libs/gtk+ cups # Fails otherwise XD x11-libs/pixman -sse2 media-sound/alsa-utils midi media-libs/alsa-lib midi >>><<< >>><<< cat /etc/portage/package.keywords =x11-misc/pcmanfm-0.5 =media-sound/mp3splt-gtk-0.5.2 =sys-power/suspend-0.8 =x11-misc/hsetroot-1.0.2 =media-libs/libmp3splt-0.5.2 =x11-misc/xdg-user-dirs-0.10 =app-cdr/recorder-1.4.1 =x11-misc/stalonetray-0.7.6 =sys-kernel/gentoo-sources-2.6.28-r5 =sys-kernel/linux-headers-2.6.28-r1 =app-emulation/virtualbox-ose-2.2.0 =app-emulation/virtualbox-modules-2.2.0 =app-emulation/virtualbox-ose-additions-2.2.0 =dev-util/kbuild-0.1.5-r1 #nodig voor tkdiff =dev-lang/tk-8.4.18-r1 =x11-base/x11-drm-99999999 ** =x11-drivers/xf86-video-nouveau-9999 ** =x11-libs/libdrm-9999 ** >>><<<
most likely your system is messed up. in the shell you're running the emerge (and thus see the hang), run `cat /proc/self/status` and post the output. if SIGALRM is being blocked for some reason, this test will sleep for quite a while.
(In reply to comment #5) > most likely your system is messed up. in the shell you're running the emerge > (and thus see the hang), run `cat /proc/self/status` and post the output. if > SIGALRM is being blocked for some reason, this test will sleep for quite a > while. > I don't get it anymore, I tried again to check `cat /proc/self/status` and while figuring that out how to do that in the shell where emerge was running it suddenlycontinued. It took a little while (about 30 seconds) but this time it at least continued. That will be one thing less to workaround during installation, anyways thanks :)
The configure test is broken wrt signed overflow. This was fixed in autoconf about 5 years ago. See: http://lists.gnu.org/archive/html/bug-gnulib/2006-12/msg00084.htmlhttp://lists.gnu.org/archive/html/bug-gnulib/2006-12/msg00084.html
Created attachment 279489 [details, diff] cvs-1.12.12-mktime-overflow.patch
Wrong bug.
