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Bug 171997 - sci-libs/lapack-atlas-3.7.24-r2 failed to emerge
Summary: sci-libs/lapack-atlas-3.7.24-r2 failed to emerge
Status: RESOLVED DUPLICATE of bug 170999
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: x86 Linux
: High normal
Assignee: Gentoo Linux bug wranglers
URL:
Whiteboard:
Keywords:
Depends on:
Blocks:
 
Reported: 2007-03-24 01:38 UTC by Mathieu Z
Modified: 2007-03-24 01:42 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


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Description Mathieu Z 2007-03-24 01:38:05 UTC
....
make[1]: Entering directory `/var/tmp/portage/sci-libs/lapack-atlas-3.7.24-r2/work/ATLAS/gentoo-build'
cd /var/tmp/portage/sci-libs/lapack-atlas-3.7.24-r2/work/ATLAS/gentoo-build ; ./xprobe_comp -v 0 -o atlconf.txt -O 1 -A 19 -Si nof77 0  -C ic 'i686-pc-linux-gnu-gcc' -F ic '-march=athlon-xp -O2 -pipe -fomit-frame-pointer' -C sm 'i686-pc-linux-gnu-gcc' -F sm '-march=athlon-xp -O2 -pipe -fomit-frame-pointer' -C dm 'i686-pc-linux-gnu-gcc' -F dm '-march=athlon-xp -O2 -pipe -fomit-frame-pointer' -C sk 'i686-pc-linux-gnu-gcc' -F sk '-march=athlon-xp -O2 -pipe -fomit-frame-pointer' -C dk 'i686-pc-linux-gnu-gcc' -F dk '-march=athlon-xp -O2 -pipe -fomit-frame-pointer' -C xc 'i686-pc-linux-gnu-gcc' -F xc '-march=athlon-xp -O2 -pipe -fomit-frame-pointer' -C if 'gfortran' -F if ''  -b 32 > config1.out
gcc-config error: gfortran wrapper: Could not determine which compiler to use.  Invalid CTARGET or CTARGET has no selected profile.
make[2]: *** [IRunF77Comp] Error 1


Unable to find usable compiler for F77; abortingMake sure compilers are in your path, and specify good compilers to configure
(see INSTALL.txt or 'configure --help' for details)make[1]: *** [atlas_run] Error 7
make[1]: Leaving directory `/var/tmp/portage/sci-libs/lapack-atlas-3.7.24-r2/work/ATLAS/gentoo-build'
make: *** [IRun_comp] Error 2
xconfig: /var/tmp/portage/sci-libs/lapack-atlas-3.7.24-r2/work/ATLAS/gentoo-build/..//CONFIG/src/config.c:125: ProbeComp: Assertion `!system(ln)' failed.

OS configured as Linux (1)

Assembly configured as GAS_x8632 (1)

Vector ISA Extension configured as  SSE1 (4,48)

Architecture configured as  K7 (19)

Clock rate configured as 2171Mhz

Maximum number of threads configured as  1
Cannot detect CPU throttling.
/bin/sh: line 1: 20533 Aborted                 ./xconfig -d s /var/tmp/portage/sci-libs/lapack-atlas-3.7.24-r2/work/ATLAS/gentoo-build/../ -d b /var/tmp/portage/sci-libs/lapack-atlas-3.7.24-r2/work/ATLAS/gentoo-build -C xc 'i686-pc-linux-gnu-gcc' -F xc '-march=athlon-xp -O2 -pipe -fomit-frame-pointer' -C ic 'i686-pc-linux-gnu-gcc' -F ic '-march=athlon-xp -O2 -pipe -fomit-frame-pointer' -C sk 'i686-pc-linux-gnu-gcc' -F sk '-march=athlon-xp -O2 -pipe -fomit-frame-pointer' -C dk 'i686-pc-linux-gnu-gcc' -F dk '-march=athlon-xp -O2 -pipe -fomit-frame-pointer' -C sm 'i686-pc-linux-gnu-gcc' -F sm '-march=athlon-xp -O2 -pipe -fomit-frame-pointer' -C dm 'i686-pc-linux-gnu-gcc' -F dm '-march=athlon-xp -O2 -pipe -fomit-frame-pointer' -C if 'gfortran' -F if '' -Si cputhrchk 0 -b 32
xconfig exited with 134

!!! ERROR: sci-libs/lapack-atlas-3.7.24-r2 failed.
Call stack:
  ebuild.sh, line 1614:   Called dyn_unpack
  ebuild.sh, line 751:   Called qa_call 'src_unpack'
  environment, line 3921:   Called src_unpack
  lapack-atlas-3.7.24-r2.ebuild, line 92:   Called die

!!! configure failed
!!! If you need support, post the topmost build error, and the call stack if relevant.
!!! A complete build log is located at '/var/log/portage/elog/sci-libs:lapack-atlas-3.7.24-r2:20070324-013417.log'.


Reproducible: Always

Steps to Reproduce:
1. emerge lapack-atlas
Comment 1 Mathieu Z 2007-03-24 01:39:01 UTC
# emerge --info
Portage 2.1.2.2 (default-linux/x86/2006.1, gcc-4.1.2, glibc-2.5-r1, 2.6.18-gentoo-r3 i686)
=================================================================
System uname: 2.6.18-gentoo-r3 i686 AMD Athlon(tm) XP 3000+
Gentoo Base System version 1.12.9
Timestamp of tree: Fri, 23 Mar 2007 19:50:01 +0000
dev-java/java-config: 1.3.7, 2.0.31-r5
dev-lang/python:     2.4.4
dev-python/pycrypto: 2.0.1-r5
sys-apps/sandbox:    1.2.18.1
sys-devel/autoconf:  2.13, 2.61
sys-devel/automake:  1.4_p6, 1.7.9-r1, 1.9.6-r2, 1.10
sys-devel/binutils:  2.17
sys-devel/gcc-config: 1.3.15-r1
sys-devel/libtool:   1.5.23b
virtual/os-headers:  2.6.20-r2
ACCEPT_KEYWORDS="x86 ~x86"
AUTOCLEAN="yes"
CBUILD="i686-pc-linux-gnu"
CFLAGS="-march=athlon-xp -O2 -pipe -fomit-frame-pointer"
CHOST="i686-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/kde/3.5/env /usr/kde/3.5/share/config /usr/kde/3.5/shutdown /usr/share/X11/xkb /usr/share/config"
CONFIG_PROTECT_MASK="/etc/env.d /etc/env.d/java/ /etc/gconf /etc/java-config/vms/ /etc/php/apache1-php5/ext-active/ /etc/php/apache2-php5/ext-active/ /etc/php/cgi-php5/ext-active/ /etc/php/cli-php5/ext-active/ /etc/revdep-rebuild /etc/splash /etc/terminfo /etc/texmf/web2c"
CTARGET="i686-pc-linux-gnu"
CXXFLAGS="-march=athlon-xp -O2 -pipe -fomit-frame-pointer"
DISTDIR="/usr/portage/distfiles"
FEATURES="autoconfig distlocks metadata-transfer sandbox sfperms strict"
GENTOO_MIRRORS="http://gentoo.osuosl.org/ http://distro.ibiblio.org/pub/linux/distributions/gentoo/ http://ftp.ucsb.edu/pub/mirrors/linux/gentoo/"
LANG="en_US.UTF-8"
LINGUAS="en zh_CN zh_TW ja"
MAKEOPTS="-j2"
PKGDIR="/usr/portage//packages"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --delete-after --stats --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --filter=H_**/files/digest-*"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage/"
PORTDIR_OVERLAY="/usr/local/portage/layman/musicbrainz /usr/local/portage/layman/sunrise /usr/local/portage/layman/initng /usr/local/portage/layman/gentoo-china /usr/local/portage/layman/xeffects /usr/local/portage"
SYNC="rsync://rsync.us.gentoo.org/gentoo-portage"
USE="3dnow X aac aalib acl acpi aim alsa apache2 audiofile bash-completion bcmath berkdb bitmap-fonts blas bluetooth bzip2 calendar cdb cdinstall cdparanoia cdr chasen cjk clamav cli cpudetection cracklib crypt cscope ctype cups curl curlwrapper dba dbus dbx dga dio directfb dri dts dv dvb dvd dvdr dvdread eds emacs emacs-w3 encode esd exif expat fam fastcgi fbcon ffmpeg fftw firefox flac flash foomaticdb fortran freetds freewnn ftp gb gcj gd gdbm gif ginac glut gnome gnustep gnutls gphoto2 gpm gps gstreamer gtk gtkhtml guile hal howl icc iconv icq idn ieee1394 imagemagick imap imlib immqt-bc innodb ipv6 isdnlog jabber jack java javascript jikes joystick jpeg jpeg2k kde kdeenablefile kdeenablefinal kdehiddenvisibility kdexdeltas kerberos krb4 lapack lash lcms ldap lemi lesstif libcaca libedit libg++ libgda lirc m17n-lib mad midi mime ming mmx mmxext mng motif mozdevelop mp3 mpeg mpi msn msql mssql mule musicbrainz mysql mysqli ncurses neXt netboot nis nls nptl nptlonly nsplugin odbc ofx ogg oggvorbis openal openexr opengl osc oscar pam pcre pda pdf perl php plotutils png portaudio posix postgres ppds pppd python qt3 qt4 quicktime readline real recode reflection ruby samba scanner sdl session simplexml slang socket5 sockets speex spell spl sse sse2 ssl svg svga szip tcltk tcpd tetex theora threads tidy tiff tokenizer truetype truetype-fonts type1-fonts unicode usb v4l v4l2 vcd vhosts videos vorbis wddx wifi win32codecs wmf wxwindows x86 xforms xine xinerama xml xml2 xmlrpc xorg xosd xprint xsl xv xvid yahoo yaz zip zlib" ALSA_CARDS="intel8x0 intel8x0m" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mulaw multi null plug rate route share shm softvol" ELIBC="glibc" INPUT_DEVICES="keyboard mouse joystick evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LINGUAS="en zh_CN zh_TW ja" USERLAND="GNU" VIDEO_CARDS="nv nvidia vesa"
Unset:  EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, LDFLAGS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS
Comment 2 ebfe 2007-03-24 01:42:06 UTC
recompile gcc with use fortran
Comment 3 Jakub Moc (RETIRED) gentoo-dev 2007-03-24 01:42:30 UTC

*** This bug has been marked as a duplicate of bug 170999 ***

*** This bug has been marked as a duplicate of bug 170999 ***