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Bug 144316 - [science overlay] sci-biology/miranda proposal for new ebuild
Summary: [science overlay] sci-biology/miranda proposal for new ebuild
Status: RESOLVED WONTFIX
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: New packages (show other bugs)
Hardware: All Other
: High enhancement (vote)
Assignee: Default Assignee for New Packages
URL: http://www.microrna.org/miranda_new.html
Whiteboard: Science overlay
Keywords: EBUILD, InOverlay
Depends on:
Blocks:
 
Reported: 2006-08-18 07:33 UTC by dawe
Modified: 2021-08-29 10:26 UTC (History)
2 users (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
emerge --info for alpha amd64 ia64 and x86 (info,9.25 KB, text/plain)
2006-08-18 07:33 UTC, dawe
Details
the ebuild for miranda (miranda-1.9.ebuild,894 bytes, text/plain)
2006-08-18 07:36 UTC, dawe
Details
miranda-3.3.ebuild.patch (miranda-3.3.ebuild.patch,634 bytes, text/plain)
2010-11-08 18:39 UTC, Joel Berendzen
Details

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Description dawe 2006-08-18 07:33:12 UTC
Hi there, here a proposal of new ebuild: miranda. miRanda is an algorithm for finding genomic targets for microRNAs.
Since I've tested on several archs, I'll attach the various emerge --info in a separated file.

d
Comment 1 dawe 2006-08-18 07:33:54 UTC
Created attachment 94544 [details]
emerge --info for alpha amd64 ia64 and x86
Comment 2 dawe 2006-08-18 07:36:26 UTC
Created attachment 94545 [details]
the ebuild for miranda
Comment 3 Jeremy Olexa (darkside) (RETIRED) archtester gentoo-dev Security 2009-03-10 17:03:04 UTC
(this is an automated message based on filtering criteria that matched this bug)
'EBUILD' is in the KEYWORDS which should mean that there is a ebuild attached 
to this bug.
This bug is assigned to maintainer-wanted which means that it is not in the 
main tree.
Heuristics show that no Gentoo developer has commented on your ebuild.

Hello, The Gentoo Team would like to firstly thank you for your ebuild 
submission. We also apologize for not being able to accommodate you in a timely
manner. There are simply too many new packages.

Allow me to use this opportunity to introduce you to Gentoo Sunrise. The 
sunrise overlay[1] is a overlay for Gentoo which we allow trusted users to 
commit to and all users can have ebuilds reviewed by Gentoo devs for entry 
into the overlay. So, the sunrise team is suggesting that you look into this 
and submit your ebuild to the overlay where even *you* can commit to. =)

Because this is a mass message, we are also asking you to be patient with us. 
We anticipate a large number of requests in a short time. 

Thanks,
On behalf of the Gentoo Sunrise Team,
Jeremy.

[1]: http://www.gentoo.org/proj/en/sunrise/
[2]: http://overlays.gentoo.org/proj/sunrise/wiki/SunriseFaq
Comment 4 Andrey Kislyuk (RETIRED) gentoo-dev 2009-03-10 21:14:26 UTC
Taking package.
Comment 5 Andrey Kislyuk (RETIRED) gentoo-dev 2009-03-10 21:20:29 UTC
Package now available in the Science overlay:

http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=tree;f=sci-biology/miranda
Comment 6 Andrey Kislyuk (RETIRED) gentoo-dev 2009-03-11 14:25:31 UTC
Please test.

dawe, if you need the other arches, please test the ebuild in science overlay and note the arches on which your tests passed. Thanks.
Comment 7 Martin Mokrejš 2009-03-20 00:09:51 UTC
Andrey,
  I dot see the ebuild at all in science overlay. BTW, is ~x86 added as well? ;-)
Comment 8 Martin Mokrejš 2009-03-20 01:33:09 UTC
(In reply to comment #7)
> Andrey,
>   I dot see the ebuild at all in science overlay.

My fault. Now I compiled&installed successfully on ~x86.
Comment 9 Joel Berendzen 2010-11-08 18:39:29 UTC
Created attachment 253667 [details]
miranda-3.3.ebuild.patch 

Patch against miranda-3.0.ebuild currently in science overlay.  Changes:
  1. econf needed for build
  2. version bump to 3.3
  3. SRC_URI change