Hi, I created an ebuild for imagej-1.35h. ImageJ is a public domain Java image processing program inspired by NIH Image for the Macintosh. It runs, either as an online applet or as a downloadable application, on any computer with a Java 1.1 or later virtual machine. It works fine on my gentoo-box. There are 3 things which need to be checked: 1) I put it in sci-misc. Correct if this is wrong 2) The start up script /usr/bin/imagej: this defines memory limit and so on. Is it suitable for everyone? 3) build.xml patch: in function src_unpack(), I patched build.xml. This care is right? If you are familiar with JAVA, ant, and so on, please point out my misses. I'll attach the ebuild... aisomur Reproducible: Always Steps to Reproduce:
Created attachment 72746 [details] imagej-1.35h.ebuild
Created attachment 72795 [details] imagej.png I forgot putting this icon-file. Please put this to the directory: <your_overlay>/sci-misc/imagej/files/
Created attachment 72971 [details] imagej.desktop Sorry, I forgot putting this, too.
Created attachment 73417 [details] imagej-1.35i.ebuild v1.35i released.
Created attachment 74663 [details] imagej-1.35j.ebuild ImageJ 1.35j was released out.
Created attachment 75999 [details] imagej-1.35k.ebuild ImageJ 1.35k was released.
yet another ebuild for ImageJ: http://www.thomas-holder.de/portage/sci-misc/imagej/
Created attachment 100792 [details] imagej-1.38a.ebuild 1.38a was released. I drastically changed the old ebuild. I refered to Thomas Holder's version. Thanks for his comment and ebuild file. From this version, you can set USE flags: plugins, doc and firefox. If you set plugins flag, the official plugins and macros will be installed. Setting doc flag, you can take api documents for developing ImageJ plugins. Moreover you can configure memory size by setting environmental vriable, $IJ_MEM, and additional class path by setting environmental vriable, $IJ_CP.
Created attachment 125662 [details] imagej-1.39a.ebuild 1.39a was released. I added $IJ_HOME. It is the path of a folder which contains "plugins" directory and IJ_Prefs.txt. Default setting is $IJ_HOME=${HOME}, i.e. ${HOME}/plugins and {HOME}/IJ_Prefs.txt. Now I'm using $IJ_HOME=${HOME}/.imagej.
(this is an automated message based on filtering criteria that matched this bug) 'EBUILD' is in the KEYWORDS which should mean that there is a ebuild attached to this bug. This bug is assigned to maintainer-wanted which means that it is not in the main tree. Heuristics show that no Gentoo developer has commented on your ebuild. Hello, The Gentoo Team would like to firstly thank you for your ebuild submission. We also apologize for not being able to accommodate you in a timely manner. There are simply too many new packages. Allow me to use this opportunity to introduce you to Gentoo Sunrise. The sunrise overlay[1] is a overlay for Gentoo which we allow trusted users to commit to and all users can have ebuilds reviewed by Gentoo devs for entry into the overlay. So, the sunrise team is suggesting that you look into this and submit your ebuild to the overlay where even *you* can commit to. =) Because this is a mass message, we are also asking you to be patient with us. We anticipate a large number of requests in a short time. Thanks, On behalf of the Gentoo Sunrise Team, Jeremy. [1]: http://www.gentoo.org/proj/en/sunrise/ [2]: http://overlays.gentoo.org/proj/sunrise/wiki/SunriseFaq
Created attachment 185091 [details] ImageJ 1.42k ebuild Updated deps to Java v1.6 to per upstream. To install, please copy to /usr/local/portage/sci-misc/
Created attachment 185092 [details] ImageJ update checker Newbie bash script to check if an update is available. Put it anywhere you like in your $PATH like /usr/bin Eventually it would be nice to put this functionality in ImageJ directly, in ij.jar (accessible from the ImageJ menu > Help > Update ImageJ...)
Created attachment 210030 [details] imagej-1.43k.ebuild New version out. I have somewhat cleaned up the ebuild (mostly cosmetic stuff). Please check. In particular: what is the reason for decrementing plugin version? My guess is that because they are released with a delay. Please let me know if the reason is differen, as I commented on this in ebuild.. I guess I'll take the bug, looking at how it is still in maintainer-needed and we are using this program in the lab (OTOH everybody else under Win :)).
(In reply to comment #13) > Please check. In particular: what is the reason for decrementing plugin > version? My guess is that because they are released with a delay. Please let me > know if the reason is different, as I commented on this in ebuild.. It's the other way round I think. Looking at the ImageJ FTP file creation dates, it seems the builds with the letter [a-z] are incremented development releases, i.e. 1.43k is pre-release to 1.43. And plugins are tarballed at new IJ release time, thus 1.43 plugins is not yet created. You might want to try #gentoo-java for more eyes to look over your ebuild. Ofc the `plugins' use-flag will need a metadata.xml since it's not in the portage use.desc
Created attachment 298371 [details] imagej-1.45s.ebuild 1.43k is no longer available for download
I pushed this below to science overlay. It is masked until somebody helps fixing the Jython issue. commit 395c7e7490baf0d7a6e6550fd47d966c285dc171 Author: Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> Date: Wed Mar 15 22:38:28 2017 +0100 sci-biology/imagej: new package Ebuild taken over from https://bugs.gentoo.org/show_bug.cgi?id=112275 src_compile screams about: >>> Compiling source in /scratch/var/tmp/portage/sci-biology/imagej-1.51k/work/source ... !!! ERROR: Package jython was not found! but it builds fine using Apache ant. ImageJ2 is using maven as a build system ( https://imagej.net/ImageJ2 ) Package-Manager: Portage-2.3.3, Repoman-2.3.1
