Bug 822510 – sci-chemistry/molden-6.9 calls commands that do not exist

• Product: Gentoo Linux
• Status: RESOLVED FIXED

[Description Agostino Sarubbo 2021-11-09 07:54:50 UTC]

https://blogs.gentoo.org/ago/2020/07/04/gentoo-tinderbox/

Issue: sci-chemistry/molden-5.5 calls commands that do not exist.
Discovered on: amd64 (internal ref: tinderbox)

NOTE:
Please look for 'command not found' and/or 'no such file or directory'.

[Comment 1 Agostino Sarubbo 2021-11-09 07:54:53 UTC]

Created attachment 749643 [details]
build.log

build log and emerge --info

[Comment 2 Agostino Sarubbo 2021-11-09 07:54:54 UTC]

Possible context of error(s):

/bin/sh: line 1: ex: command not found

[Comment 3 Larry the Git Cow 2022-02-19 13:59:08 UTC]

The bug has been referenced in the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=ec853626b72f671a8a201bb5472680a9801b3f89

commit ec853626b72f671a8a201bb5472680a9801b3f89
Author:     Andrew Ammerlaan <[e-mail]>
AuthorDate: 2022-02-19 13:58:05 +0000
Commit:     Andrew Ammerlaan <[e-mail]>
CommitDate: 2022-02-19 13:59:03 +0000

    sci-chemistry/molden: add version 6.9
    
    Bug: https://bugs.gentoo.org/831519
    Bug: https://bugs.gentoo.org/822510
    Bug: https://bugs.gentoo.org/775626
    Bug: https://bugs.gentoo.org/610968
    Bug: https://bugs.gentoo.org/534712
    Closes: https://bugs.gentoo.org/721290
    Package-Manager: Portage-3.0.30, Repoman-3.0.3
    Signed-off-by: Andrew Ammerlaan <[e-mail]>

 sci-chemistry/molden/Manifest                      |  1 +
 .../molden/files/molden-6.9-ldflags.patch          | 87 ++++++++++++++++++++++
 sci-chemistry/molden/molden-6.9.ebuild             | 81 ++++++++++++++++++++
 3 files changed, 169 insertions(+)

[Comment 4 Agostino Sarubbo 2022-02-19 15:34:45 UTC]

ci has reproduced this issue with version 6.9 - Updating summary.

[Comment 5 Larry the Git Cow 2022-07-16 14:06:12 UTC]

The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=bf486b04b3c2f2513ba8fee0278e7395d4cdb63c

commit bf486b04b3c2f2513ba8fee0278e7395d4cdb63c
Author:     Petr Vaněk <[e-mail]>
AuthorDate: 2022-07-16 14:05:58 +0000
Commit:     David Seifert <[e-mail]>
CommitDate: 2022-07-16 14:05:58 +0000

    sci-chemistry/molden: install sci-chemistry/surf instead of bundled one
    
    sci-chemistry/molden newly installs /bin/surf since 6.9, commit
    ec853626b72f ("sci-chemistry/molden: add version 6.9"), however, this is
    bundled version of sci-chemistry/surf which should be used instead. This
    change solves multiple issues:
    
    - unnecessary /bin/surf collision with sci-chemistry/surf and
      www-client/surf, #834033 #858209
    - missing SURF license of bundled surf, which is no longer needed
    - ex: no python-exec wrapped executable found in /usr/lib/python-exec,
      #849371 issue, which is triggered by surf/surf target.
    
    x11-misc/gccmakedep and app-editors/vim dependencies are no longer
    needed because they were used in surf/surf target.
    
    Closes: https://github.com/gentoo/gentoo/pull/26439
    Closes: https://bugs.gentoo.org/822510
    Closes: https://bugs.gentoo.org/834033
    Closes: https://bugs.gentoo.org/849371
    Closes: https://bugs.gentoo.org/858209
    Signed-off-by: Petr Vaněk <[e-mail]>
    Signed-off-by: David Seifert <[e-mail]>

 .../molden/{molden-6.9.ebuild => molden-6.9-r1.ebuild}   | 16 ++++++----------
 1 file changed, 6 insertions(+), 10 deletions(-)