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Bug 849371 - sci-chemistry/molden-6.9 - ex: no python-exec wrapped executable found in /usr/lib/python-exec.
Summary: sci-chemistry/molden-6.9 - ex: no python-exec wrapped executable found in /us...
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal (vote)
Assignee: Gentoo Chemistry-Related Packages
URL:
Whiteboard:
Keywords: PullRequest
Depends on:
Blocks:
 
Reported: 2022-06-02 18:09 UTC by Toralf Förster
Modified: 2022-07-16 14:06 UTC (History)
0 users

See Also:
Package list:
Runtime testing required: ---


Attachments
emerge-info.txt (emerge-info.txt,17.90 KB, text/plain)
2022-06-02 18:09 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,201.44 KB, text/plain)
2022-06-02 18:09 UTC, Toralf Förster
Details
environment (environment,86.45 KB, text/plain)
2022-06-02 18:09 UTC, Toralf Förster
Details
etc.portage.tar.bz2 (etc.portage.tar.bz2,31.79 KB, application/x-bzip)
2022-06-02 18:09 UTC, Toralf Förster
Details
sci-chemistry:molden-6.9:20220602-163619.log (sci-chemistry:molden-6.9:20220602-163619.log,79.73 KB, text/plain)
2022-06-02 18:09 UTC, Toralf Förster
Details
temp.tar.bz2 (temp.tar.bz2,28.61 KB, application/x-bzip)
2022-06-02 18:09 UTC, Toralf Förster
Details

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Description Toralf Förster gentoo-dev 2022-06-02 18:09:40 UTC
mv src/ambfor/ambmd bin/ambmd
make -C src/surf depend 
make[1]: Entering directory '/var/tmp/portage/sci-chemistry/molden-6.9/work/molden6.9/src/surf'
making dependencies...
ex: no python-exec wrapped executable found in /usr/lib/python-exec.
make[1]: *** [Makefile:61: depend] Error 127
make[1]: Leaving directory '/var/tmp/portage/sci-chemistry/molden-6.9/work/molden6.9/src/surf'

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 17.1_no_multilib-j4-20220601-030005

  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-9.3.1
 [2] x86_64-pc-linux-gnu-10.3.1
 [3] x86_64-pc-linux-gnu-12.1.1 *
clang/llvm (if any):
clang version 14.0.4
Target: x86_64-pc-linux-gnu
Thread model: posix
InstalledDir: /usr/lib/llvm/14/bin
/usr/lib/llvm/14
14.0.4
Python 3.9.13
Available Ruby profiles:
  [1]   ruby31 *
The following VMs are available for generation-2:
*)	Eclipse Temurin JDK 11.0.15_p10 [openjdk-bin-11]
2)	Eclipse Temurin JDK 17.0.3_p7 [openjdk-bin-17]
Available Java Virtual Machines:
  [1]   openjdk-bin-11  system-vm
  [2]   openjdk-bin-17 

php cli:
  [1]   php8.1 *

  HEAD of ::gentoo
commit 249efed02ab16335e03fbd8efd435dafff029a12
Author: Repository mirror & CI <repomirrorci@gentoo.org>
Date:   Thu Jun 2 16:03:46 2022 +0000

    2022-06-02 16:03:46 UTC

emerge -qpvO sci-chemistry/molden
[ebuild  N    ] sci-chemistry/molden-6.9  USE="-opengl"
Comment 1 Toralf Förster gentoo-dev 2022-06-02 18:09:41 UTC
Created attachment 782405 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2022-06-02 18:09:43 UTC
Created attachment 782408 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2022-06-02 18:09:44 UTC
Created attachment 782411 [details]
environment
Comment 4 Toralf Förster gentoo-dev 2022-06-02 18:09:45 UTC
Created attachment 782414 [details]
etc.portage.tar.bz2
Comment 5 Toralf Förster gentoo-dev 2022-06-02 18:09:47 UTC
Created attachment 782417 [details]
sci-chemistry:molden-6.9:20220602-163619.log
Comment 6 Toralf Förster gentoo-dev 2022-06-02 18:09:48 UTC
Created attachment 782420 [details]
temp.tar.bz2
Comment 7 Larry the Git Cow gentoo-dev 2022-07-16 14:06:14 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=bf486b04b3c2f2513ba8fee0278e7395d4cdb63c

commit bf486b04b3c2f2513ba8fee0278e7395d4cdb63c
Author:     Petr Vaněk <arkamar@atlas.cz>
AuthorDate: 2022-07-16 14:05:58 +0000
Commit:     David Seifert <soap@gentoo.org>
CommitDate: 2022-07-16 14:05:58 +0000

    sci-chemistry/molden: install sci-chemistry/surf instead of bundled one
    
    sci-chemistry/molden newly installs /bin/surf since 6.9, commit
    ec853626b72f ("sci-chemistry/molden: add version 6.9"), however, this is
    bundled version of sci-chemistry/surf which should be used instead. This
    change solves multiple issues:
    
    - unnecessary /bin/surf collision with sci-chemistry/surf and
      www-client/surf, #834033 #858209
    - missing SURF license of bundled surf, which is no longer needed
    - ex: no python-exec wrapped executable found in /usr/lib/python-exec,
      #849371 issue, which is triggered by surf/surf target.
    
    x11-misc/gccmakedep and app-editors/vim dependencies are no longer
    needed because they were used in surf/surf target.
    
    Closes: https://github.com/gentoo/gentoo/pull/26439
    Closes: https://bugs.gentoo.org/822510
    Closes: https://bugs.gentoo.org/834033
    Closes: https://bugs.gentoo.org/849371
    Closes: https://bugs.gentoo.org/858209
    Signed-off-by: Petr Vaněk <arkamar@atlas.cz>
    Signed-off-by: David Seifert <soap@gentoo.org>

 .../molden/{molden-6.9.ebuild => molden-6.9-r1.ebuild}   | 16 ++++++----------
 1 file changed, 6 insertions(+), 10 deletions(-)