Bug 731880

Summary:	sci-biology/mira fails to compile
Product:	Gentoo Linux	Reporter:	Agostino Sarubbo <ago>
Component:	Current packages	Assignee:	Gentoo Science Biology related packages <sci-biology>
Status:	RESOLVED FIXED
Severity:	normal	CC:	treecleaner
Priority:	Normal	Keywords:	PMASKED
Version:	unspecified
Hardware:	All
OS:	Linux
Whiteboard:
Package list:		Runtime testing required:	---
Attachments:	build.log other.tar.bz2

Description Agostino Sarubbo gentoo-dev

2020-07-09 11:53:57 UTC

https://blogs.gentoo.org/ago/2020/07/04/gentoo-tinderbox/

Issue: sci-biology/mira fails to compile.
Discovered on: amd64  (internal ref: tinderbox)

NOTE:
This machine uses a clang/LLVM toolchain.
If you think that this issue is strictly related to clang/LLVM please block bug 408963. If you think that this issue isstrictly related to the LLD linker, please block bug 731004.

Comment 1 Agostino Sarubbo gentoo-dev

2020-07-09 11:54:03 UTC

Created attachment 648518 [details]
build.log

build log and emerge --info

Comment 2 Agostino Sarubbo gentoo-dev

2020-07-09 11:54:06 UTC

Created attachment 648520 [details]
other.tar.bz2

other logs

Comment 3 Larry the Git Cow gentoo-dev

2021-08-29 10:38:38 UTC

The bug has been referenced in the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=9e8a002fb82a9b317dd6d3cf60359d0315201798

commit 9e8a002fb82a9b317dd6d3cf60359d0315201798
Author:     David Seifert <soap@gentoo.org>
AuthorDate: 2021-08-29 10:38:17 +0000
Commit:     David Seifert <soap@gentoo.org>
CommitDate: 2021-08-29 10:38:17 +0000

    profiles: last-rite sci-biology/mira
    
    Bug: https://bugs.gentoo.org/585942
    Bug: https://bugs.gentoo.org/731880
    Bug: https://bugs.gentoo.org/808667
    Signed-off-by: David Seifert <soap@gentoo.org>

 profiles/package.mask | 7 +++++++
 1 file changed, 7 insertions(+)

Comment 4 Larry the Git Cow gentoo-dev

2021-09-28 14:32:03 UTC

The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=35d98adecae341f50c42caf4cea4bb264a57fd67

commit 35d98adecae341f50c42caf4cea4bb264a57fd67
Author:     Jakov Smolić <jsmolic@gentoo.org>
AuthorDate: 2021-09-28 14:31:19 +0000
Commit:     Jakov Smolić <jsmolic@gentoo.org>
CommitDate: 2021-09-28 14:31:19 +0000

    sci-biology/mira: Remove last-rited package
    
    Closes: https://bugs.gentoo.org/808667
    Closes: https://bugs.gentoo.org/585942
    Closes: https://bugs.gentoo.org/731880
    Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>

 profiles/package.mask                              |  7 --
 sci-biology/mira/Manifest                          |  2 -
 sci-biology/mira/files/mira-4.0.2-boost-1.50.patch | 22 -----
 sci-biology/mira/files/mira-4.0.2-cmath.patch      | 14 ----
 sci-biology/mira/files/mira-4.0.2-cout.patch       | 27 ------
 sci-biology/mira/metadata.xml                      | 11 ---
 sci-biology/mira/mira-4.0.2-r1.ebuild              | 97 ----------------------
 7 files changed, 180 deletions(-)