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Bug 951630 - sci-biology/bamtools-2.5.2 - [gcc-15] [cmake-4] -- Configuring incomplete, errors occurred!
Summary: sci-biology/bamtools-2.5.2 - [gcc-15] [cmake-4] -- Configuring incomplete, er...
Status: CONFIRMED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All Linux
: Normal normal
Assignee: Gentoo Science Biology related packages
URL:
Whiteboard:
Keywords: PATCH, PullRequest
Depends on:
Blocks: cmake-4
  Show dependency tree
 
Reported: 2025-03-19 12:46 UTC by Toralf Förster
Modified: 2025-03-25 09:21 UTC (History)
1 user (show)

See Also:
Package list:
Runtime testing required: ---


Attachments
emerge-info.txt (emerge-info.txt,16.94 KB, text/plain)
2025-03-19 12:46 UTC, Toralf Förster
Details
emerge-history.txt (emerge-history.txt,20.53 KB, text/plain)
2025-03-19 12:46 UTC, Toralf Förster
Details
environment (environment,87.98 KB, text/plain)
2025-03-19 12:46 UTC, Toralf Förster
Details
etc.portage.tar.xz (etc.portage.tar.xz,14.05 KB, application/x-xz)
2025-03-19 12:46 UTC, Toralf Förster
Details
logs.tar.xz (logs.tar.xz,3.86 KB, application/x-xz)
2025-03-19 12:46 UTC, Toralf Förster
Details
qlist-info.txt (qlist-info.txt,69.25 KB, text/plain)
2025-03-19 12:47 UTC, Toralf Förster
Details
sci-biology:bamtools-2.5.2:20250319-122259.log (sci-biology:bamtools-2.5.2:20250319-122259.log,3.08 KB, text/plain)
2025-03-19 12:47 UTC, Toralf Förster
Details
temp.tar.xz (temp.tar.xz,20.27 KB, application/x-xz)
2025-03-19 12:47 UTC, Toralf Förster
Details

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Description Toralf Förster gentoo-dev 2025-03-19 12:46:55 UTC
  to tell CMake that the project requires at least <min> but has been updated
  to work with policies introduced by <max> or earlier.

  Or, add -DCMAKE_POLICY_VERSION_MINIMUM=3.5 to try configuring anyway.


-- Configuring incomplete, errors occurred!
 * ERROR: sci-biology/bamtools-2.5.2::gentoo failed (configure phase):
 *   cmake failed

  -------------------------------------------------------------------

  This is an unstable amd64 chroot image at a tinderbox (==build bot)
  name: 23.0_no_multilib-20250319-033507

  KEYWORDED/UNMASKED

  [cmake-4] Requested by sam
  =dev-build/cmake-4*

  [gcc-15] Requested by sam
  <sys-devel/gcc-15.0.9999:15

  The attached etc.portage.tar.xz has all details.
  -------------------------------------------------------------------

gcc-config -l:
 [1] x86_64-pc-linux-gnu-15 *
llvm-config: Python 3.12.9
go version go1.24.1 linux/amd64
Available Ruby profiles:
  [1]   ruby32 (with Rubygems)
  [2]   ruby33 (with Rubygems)
  [3]   ruby34 (with Rubygems) *
Available Rust versions:
  [1]   rust-bin-1.85.0 *

  HEAD of ::gentoo
commit 7f72f5970f4a0f1233110f048ac0531703c480d3
Author: Repository mirror & CI <repomirrorci@gentoo.org>
Date:   Wed Mar 19 11:03:29 2025 +0000

    2025-03-19 11:03:28 UTC

emerge -qpvO =sci-biology/bamtools-2.5.2
[ebuild  N    ] sci-biology/bamtools-2.5.2
Comment 1 Toralf Förster gentoo-dev 2025-03-19 12:46:55 UTC
Created attachment 921286 [details]
emerge-info.txt
Comment 2 Toralf Förster gentoo-dev 2025-03-19 12:46:56 UTC
Created attachment 921287 [details]
emerge-history.txt
Comment 3 Toralf Förster gentoo-dev 2025-03-19 12:46:57 UTC
Created attachment 921288 [details]
environment
Comment 4 Toralf Förster gentoo-dev 2025-03-19 12:46:58 UTC
Created attachment 921289 [details]
etc.portage.tar.xz
Comment 5 Toralf Förster gentoo-dev 2025-03-19 12:46:59 UTC
Created attachment 921290 [details]
logs.tar.xz
Comment 6 Toralf Förster gentoo-dev 2025-03-19 12:47:00 UTC
Created attachment 921291 [details]
qlist-info.txt
Comment 7 Toralf Förster gentoo-dev 2025-03-19 12:47:01 UTC
Created attachment 921292 [details]
sci-biology:bamtools-2.5.2:20250319-122259.log
Comment 8 Toralf Förster gentoo-dev 2025-03-19 12:47:02 UTC
Created attachment 921293 [details]
temp.tar.xz
Comment 9 NHO 2025-03-20 07:28:08 UTC
Fixed upstream right after release
https://github.com/pezmaster31/bamtools/commit/a610d2c0150d4b821aa4096e57eb77e4b0c14aa7
Comment 10 NHO 2025-03-20 07:36:21 UTC
Asked for new release: https://github.com/pezmaster31/bamtools/issues/242