Bug 934445 – dev-python/tlsh: ImportError on musl ppc: _ZN4Tlsh5finalEPKhji: symbol not found

• Status: UNCONFIRMED
• Product: Gentoo Linux

[Description A. Wilcox (awilfox) 2024-06-17 05:18:45 UTC]

Created attachment 895942 [details]
/var/tmp/portage/dev-python/tlsh-4.8.2-r1/temp/build.log

>>> Test phase: dev-python/tlsh-4.8.2-r1
 * python3_12: running distutils-r1_run_phase python_test
Traceback (most recent call last):
  File "/var/tmp/portage/dev-python/tlsh-4.8.2-r1/work/tlsh-4.8.2/py_ext/test.py", line 4, in <module>
    import tlsh
ImportError: Error relocating /var/tmp/portage/dev-python/tlsh-4.8.2-r1/work/tlsh-4.8.2/py_ext-python3_12/install/usr/lib/python3.12/site-packages/tlsh.cpython-312-powerpc-linux-musl.so: _ZN4Tlsh5finalEPKhji: symbol not found


I had to remove the '&> /dev/null' from the test phase to see the error, but it is there.  Build log attached.


Portage 3.0.63 (python 3.12.3-final-0, default/linux/ppc/23.0/musl/hardened, gcc-13, musl-1.2.4-r1, 5.15.98-mc4-easy ppc)
=================================================================
System uname: Linux-5.15.98-mc4-easy-ppc-POWER9,_altivec_supported-with-libc
KiB Mem:   164876832 total, 162350228 free
KiB Swap:          0 total,         0 free
Timestamp of repository gentoo: Sat, 15 Jun 2024 00:45:00 +0000
Head commit of repository gentoo: dc3715e54ff4f1549576cd25fb6abeaeb7f9ef11
sh bash 5.1_p16-r10
ld GNU ld (Gentoo 2.41 p5) 2.41.0
app-misc/pax-utils:        1.3.7::gentoo
app-shells/bash:           5.1_p16-r10::gentoo
dev-build/autoconf:        2.71-r7::gentoo
dev-build/automake:        1.16.5-r2::gentoo
dev-build/cmake:           3.28.5::gentoo
dev-build/libtool:         2.4.7-r4::gentoo
dev-build/make:            4.4.1-r1::gentoo
dev-build/meson:           1.4.0-r1::gentoo
dev-lang/perl:             5.38.2-r3::gentoo
dev-lang/python:           3.12.3-r1::gentoo
sys-apps/baselayout:       2.15::gentoo
sys-apps/openrc:           0.54::gentoo
sys-apps/sandbox:          2.38::gentoo
sys-devel/binutils:        2.41-r5::gentoo
sys-devel/binutils-config: 5.5::gentoo
sys-devel/gcc:             9.5.0::gentoo, 10.5.0::gentoo, 11.4.1_p20240111::gentoo, 12.3.1_p20240209::gentoo, 13.2.1_p20240210::gentoo, 14.1.1_p20240608::gentoo, 15.0.9999::gentoo
sys-devel/gcc-config:      2.11::gentoo
sys-kernel/linux-headers:  6.6-r1::gentoo (virtual/os-headers)
sys-libs/musl:             1.2.4-r1::gentoo
Repositories:

gentoo
    location: /var/db/repos/gentoo
    sync-type: rsync
    sync-uri: rsync://rsync.gentoo.org/gentoo-portage
    priority: -1000
    volatile: False
    sync-rsync-extra-opts: 
    sync-rsync-verify-max-age: 3
    sync-rsync-verify-jobs: 1
    sync-rsync-verify-metamanifest: yes

Binary Repositories:

gentoobinhost
    priority: 1
    sync-uri: https://gentoo.osuosl.org/releases/ppc/binpackages/23.0/ppc_musl_hardened

ACCEPT_KEYWORDS="ppc"
ACCEPT_LICENSE="@FREE"
CBUILD="powerpc-unknown-linux-musl"
CFLAGS="-O2 -mcpu=powerpc -mtune=powerpc -pipe"
CHOST="powerpc-unknown-linux-musl"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/sandbox.d"
CXXFLAGS="-O2 -mcpu=powerpc -mtune=powerpc -pipe"
DISTDIR="/var/cache/distfiles"
ENV_UNSET="CARGO_HOME DBUS_SESSION_BUS_ADDRESS DISPLAY GDK_PIXBUF_MODULE_FILE GOBIN GOPATH PERL5LIB PERL5OPT PERLPREFIX PERL_CORE PERL_MB_OPT PERL_MM_OPT XAUTHORITY XDG_CACHE_HOME XDG_CONFIG_HOME XDG_DATA_HOME XDG_RUNTIME_DIR XDG_STATE_HOME"
FCFLAGS="-O2 -mcpu=powerpc -mtune=powerpc -pipe"
FEATURES="assume-digests binpkg-docompress binpkg-dostrip binpkg-logs binpkg-multi-instance buildpkg-live config-protect-if-modified distlocks ebuild-locks fixlafiles ipc-sandbox merge-sync merge-wait network-sandbox news parallel-fetch pid-sandbox pkgdir-index-trusted preserve-libs protect-owned qa-unresolved-soname-deps sandbox sfperms splitdebug strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync xattr"
FFLAGS="-O2 -mcpu=powerpc -mtune=powerpc -pipe"
GENTOO_MIRRORS="http://distfiles.gentoo.org"
INSTALL_MASK="charset.alias /usr/share/locale/locale.alias"
LANG="C.UTF8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
LEX="flex"
PKGDIR="/var/cache/binpkgs"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages --exclude=/.git"
PORTAGE_TMPDIR="/var/tmp"
SHELL="/bin/zsh"
USE="acl big-endian bzip2 crypt hardened iconv ipv6 ncurses nls openmp pam pcre pic pie ppc readline seccomp ssl ssp unicode xattr xtpax zlib" ADA_TARGET="gcc_12" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_anon authn_dbm authn_file authz_dbm authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir env expires ext_filter file_cache filter headers include info log_config logio mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="karbon sheets words" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="musl" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock greis isync itrax mtk3301 ntrip navcom oceanserver oncore rtcm104v2 rtcm104v3 sirf skytraq superstar2 tsip tripmate tnt ublox" INPUT_DEVICES="libinput" KERNEL="linux" LCD_DEVICES="bayrad cfontz glk hd44780 lb216 lcdm001 mtxorb text" LLVM_TARGETS="PowerPC" LUA_SINGLE_TARGET="lua5-1" LUA_TARGETS="lua5-1" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php8-2" POSTGRES_TARGETS="postgres15" PYTHON_SINGLE_TARGET="python3_12" PYTHON_TARGETS="python3_12" RUBY_TARGETS="ruby31 ruby32" VIDEO_CARDS="fbdev mga r128 radeon dummy" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipp2p iface geoip fuzzy condition tarpit sysrq proto logmark ipmark dhcpmac delude chaos account"
Unset:  ADDR2LINE, AR, ARFLAGS, AS, ASFLAGS, CC, CCLD, CONFIG_SHELL, CPP, CPPFLAGS, CTARGET, CXX, CXXFILT, ELFEDIT, EMERGE_DEFAULT_OPTS, EXTRA_ECONF, F77FLAGS, FC, GCOV, GPROF, LC_ALL, LD, LFLAGS, LIBTOOL, LINGUAS, MAKE, MAKEFLAGS, MAKEOPTS, NM, OBJCOPY, OBJDUMP, PORTAGE_BINHOST, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, PYTHONPATH, RANLIB, READELF, RUSTFLAGS, SIZE, STRINGS, STRIP, YACC, YFLAGS

[Comment 1 Eli Schwartz 2024-06-17 05:29:47 UTC]

Patch pending to no longer silence the testsuite (also: make it test stuff).

[Comment 2 A. Wilcox (awilfox) 2024-06-17 05:52:59 UTC]

Created attachment 895943 [details, diff]
Patch to fix the issue.

This will happen on all big endian systems, because the __SPARC hack for bug 861710 changes the visibility to internal due to some ancient stupid Solaris bug upstream.

Patch attached fixes it on my system.

[Comment 3 Thomas Bracht Laumann Jespersen 2024-07-02 04:43:23 UTC]

thanks for pushing a fix awilfox, i'm fine with the patch at is stands - i don't really have a good way to test it.

should i open a PR to get the patch in? or will you take care of it awilfox?

[Comment 4 A. Wilcox (awilfox) 2024-07-02 04:48:44 UTC]

I'll be happy to open a merge request for this change.