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Bug 929763 - sci-chemistry/vmd: needs upgrade to Python 3.12 (PythonCompatUpdate)
Summary: sci-chemistry/vmd: needs upgrade to Python 3.12 (PythonCompatUpdate)
Status: RESOLVED FIXED
Alias: None
Product: Gentoo Linux
Classification: Unclassified
Component: Current packages (show other bugs)
Hardware: All All
: Normal normal
Assignee: Alexey Shvetsov
URL:
Whiteboard:
Keywords:
Depends on:
Blocks: 921826
  Show dependency tree
 
Reported: 2024-04-13 08:51 UTC by Michał Górny
Modified: 2024-07-11 11:42 UTC (History)
3 users (show)

See Also:
Package list:
Runtime testing required: ---


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Description Michał Górny archtester Gentoo Infrastructure gentoo-dev Security 2024-04-13 08:51:24 UTC
This package does not support Python 3.12.  Please test it with Python 3.12 as a matter of urgency as the default will change in early June, as per message on gentoo-dev: https://www.mail-archive.com/gentoo-dev@lists.gentoo.org/msg99104.html.  Please check the information provided in the tracker.  Ask in #gentoo-python on IRC if need any help.
Comment 1 he.ousia 2024-07-05 16:50:48 UTC
Builds and works fine so far, but /src/Makefile needs addition of -I/usr/lib/python3.12/site-packages/numpy/_core/include
Comment 2 Pacho Ramos gentoo-dev 2024-07-10 07:49:59 UTC
(In reply to he.ousia from comment #1)
> Builds and works fine so far, but /src/Makefile needs addition of
> -I/usr/lib/python3.12/site-packages/numpy/_core/include

Thanks for the tip. I was having issues to build it after numpy-2 update. The ebuild will need to require numpy >= 2 as that location changed compared with numpy-1
Comment 3 Larry the Git Cow gentoo-dev 2024-07-11 11:42:58 UTC
The bug has been closed via the following commit(s):

https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=8762ad972d826ad2be59344e68b67b1bbfefe760

commit 8762ad972d826ad2be59344e68b67b1bbfefe760
Author:     Pacho Ramos <pacho@gentoo.org>
AuthorDate: 2024-07-11 11:39:53 +0000
Commit:     Pacho Ramos <pacho@gentoo.org>
CommitDate: 2024-07-11 11:42:13 +0000

    sci-chemistry/vmd: Fix compat with numpy-2 and don't mess with linking
    
    Ebuild forcing linking flags break some utils, point to new location for
    numpy2 include files
    
    Closes: https://bugs.gentoo.org/929763
    Thanks-to: he.ousia
    Closes: https://bugs.gentoo.org/835604
    Thanks-to: Hypoon
    Signed-off-by: Pacho Ramos <pacho@gentoo.org>

 sci-chemistry/vmd/vmd-1.9.4_alpha57-r1.ebuild | 263 ++++++++++++++++++++++++++
 1 file changed, 263 insertions(+)